RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
LINC01943-202ENST00000628090 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
LINC01943-202ENST00000628090 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
LINC01943-202ENST00000628090 ABCC9O60706 1549 aa20.95■□□□□ 0.94
LINC01943-202ENST00000628090 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
LINC01943-202ENST00000628090 RB1CC1Q8TDY2 1594 aa19.86■□□□□ 0.77
LINC01943-202ENST00000628090 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
LINC01943-202ENST00000628090 NACADO15069 1562 aa19.74■□□□□ 0.75
LINC01943-202ENST00000628090 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
LINC01943-202ENST00000628090 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
LINC01943-202ENST00000628090 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
LINC01943-202ENST00000628090 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
LINC01943-202ENST00000628090 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
LINC01943-202ENST00000628090 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
LINC01943-202ENST00000628090 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
LINC01943-202ENST00000628090 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
LINC01943-202ENST00000628090 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
LINC01943-202ENST00000628090 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
LINC01943-202ENST00000628090 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
LINC01943-202ENST00000628090 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
LINC01943-202ENST00000628090 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
LINC01943-202ENST00000628090 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
LINC01943-202ENST00000628090 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
LINC01943-202ENST00000628090 ATAD2BQ9ULI0 1458 aa18.25■□□□□ 0.51
LINC01943-202ENST00000628090 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
LINC01943-202ENST00000628090 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
LINC01943-202ENST00000628090 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
LINC01943-202ENST00000628090 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
LINC01943-202ENST00000628090 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
LINC01943-202ENST00000628090 NESP48681 1621 aa18.05■□□□□ 0.48
LINC01943-202ENST00000628090 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
LINC01943-202ENST00000628090 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
LINC01943-202ENST00000628090 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
LINC01943-202ENST00000628090 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
LINC01943-202ENST00000628090 CUX2O14529 1486 aa17.92■□□□□ 0.46
LINC01943-202ENST00000628090 WIZO95785 1651 aa17.84■□□□□ 0.45
LINC01943-202ENST00000628090 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
LINC01943-202ENST00000628090 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
LINC01943-202ENST00000628090 CADPSQ9ULU8 1353 aa17.74■□□□□ 0.43
LINC01943-202ENST00000628090 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
LINC01943-202ENST00000628090 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
LINC01943-202ENST00000628090 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
LINC01943-202ENST00000628090 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
LINC01943-202ENST00000628090 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
LINC01943-202ENST00000628090 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
LINC01943-202ENST00000628090 CFTRP13569 1480 aa17.54■□□□□ 0.4
LINC01943-202ENST00000628090 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
LINC01943-202ENST00000628090 WDR62O43379 1518 aa17.51■□□□□ 0.39
LINC01943-202ENST00000628090 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
LINC01943-202ENST00000628090 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
LINC01943-202ENST00000628090 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
LINC01943-202ENST00000628090 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LINC01943-202ENST00000628090 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
LINC01943-202ENST00000628090 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
LINC01943-202ENST00000628090 FOXD1Q16676 465 aa17.22■□□□□ 0.35
LINC01943-202ENST00000628090 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
LINC01943-202ENST00000628090 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.35
LINC01943-202ENST00000628090 TOPBP1Q92547 1522 aa17.21■□□□□ 0.34
LINC01943-202ENST00000628090 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
LINC01943-202ENST00000628090 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
LINC01943-202ENST00000628090 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
LINC01943-202ENST00000628090 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
LINC01943-202ENST00000628090 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
LINC01943-202ENST00000628090 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
LINC01943-202ENST00000628090 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
LINC01943-202ENST00000628090 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
LINC01943-202ENST00000628090 TDRD9Q8NDG6 1382 aaKnown RBP17■□□□□ 0.31
LINC01943-202ENST00000628090 SOGA1O94964 1423 aa16.99■□□□□ 0.31
LINC01943-202ENST00000628090 FBLN2P98095 1184 aa16.97■□□□□ 0.31
LINC01943-202ENST00000628090 CUX1P39880 1505 aa16.96■□□□□ 0.3
LINC01943-202ENST00000628090 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
LINC01943-202ENST00000628090 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
LINC01943-202ENST00000628090 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
LINC01943-202ENST00000628090 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
LINC01943-202ENST00000628090 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
LINC01943-202ENST00000628090 CHD1O14646 1710 aa16.9■□□□□ 0.3
LINC01943-202ENST00000628090 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
LINC01943-202ENST00000628090 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
LINC01943-202ENST00000628090 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
LINC01943-202ENST00000628090 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
LINC01943-202ENST00000628090 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
LINC01943-202ENST00000628090 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
LINC01943-202ENST00000628090 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
LINC01943-202ENST00000628090 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
LINC01943-202ENST00000628090 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
LINC01943-202ENST00000628090 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
LINC01943-202ENST00000628090 CLASP1Q7Z460 1538 aa16.71■□□□□ 0.27
LINC01943-202ENST00000628090 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
LINC01943-202ENST00000628090 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
LINC01943-202ENST00000628090 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
LINC01943-202ENST00000628090 ABCA5Q8WWZ7 1642 aa16.67■□□□□ 0.26
LINC01943-202ENST00000628090 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
LINC01943-202ENST00000628090 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
LINC01943-202ENST00000628090 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
LINC01943-202ENST00000628090 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
LINC01943-202ENST00000628090 ADRA2BP18089 450 aa16.58■□□□□ 0.24
LINC01943-202ENST00000628090 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
LINC01943-202ENST00000628090 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
LINC01943-202ENST00000628090 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
LINC01943-202ENST00000628090 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms