RNA–Protein interactions for RNA: ENST00000628080.1

PUDPP2-202, Transcript of pseudouridine 5'-phosphatase pseudogene 2, humanhuman

TSL 5 BASIC

Gene PUDPP2, Length 737 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP2-202ENST00000628080 NISCHQ9Y2I1 1504 aa29.5■■■□□ 2.31
PUDPP2-202ENST00000628080 ABCC9O60706 1549 aa27■■□□□ 1.91
PUDPP2-202ENST00000628080 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
PUDPP2-202ENST00000628080 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
PUDPP2-202ENST00000628080 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
PUDPP2-202ENST00000628080 NACADO15069 1562 aa25.27■■□□□ 1.64
PUDPP2-202ENST00000628080 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
PUDPP2-202ENST00000628080 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
PUDPP2-202ENST00000628080 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
PUDPP2-202ENST00000628080 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
PUDPP2-202ENST00000628080 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
PUDPP2-202ENST00000628080 SHROOM4Q9ULL8 1493 aa24.45■■□□□ 1.5
PUDPP2-202ENST00000628080 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
PUDPP2-202ENST00000628080 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
PUDPP2-202ENST00000628080 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
PUDPP2-202ENST00000628080 CC2D2AQ9P2K1 1620 aa24.34■■□□□ 1.49
PUDPP2-202ENST00000628080 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
PUDPP2-202ENST00000628080 EIF4G1Q04637 1599 aaKnown RBP24.21■■□□□ 1.47
PUDPP2-202ENST00000628080 DNAJC5Q9H3Z4 198 aa23.87■■□□□ 1.41
PUDPP2-202ENST00000628080 CUX2O14529 1486 aa23.43■■□□□ 1.34
PUDPP2-202ENST00000628080 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
PUDPP2-202ENST00000628080 ERCC6Q03468 1493 aa23.35■■□□□ 1.33
PUDPP2-202ENST00000628080 ATAD2BQ9ULI0 1458 aa23.23■■□□□ 1.31
PUDPP2-202ENST00000628080 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
PUDPP2-202ENST00000628080 HMGXB3Q12766 1538 aa23.12■■□□□ 1.29
PUDPP2-202ENST00000628080 NESP48681 1621 aa23.08■■□□□ 1.29
PUDPP2-202ENST00000628080 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
PUDPP2-202ENST00000628080 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
PUDPP2-202ENST00000628080 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
PUDPP2-202ENST00000628080 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
PUDPP2-202ENST00000628080 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
PUDPP2-202ENST00000628080 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
PUDPP2-202ENST00000628080 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
PUDPP2-202ENST00000628080 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
PUDPP2-202ENST00000628080 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
PUDPP2-202ENST00000628080 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
PUDPP2-202ENST00000628080 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
PUDPP2-202ENST00000628080 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.2
PUDPP2-202ENST00000628080 WDR62O43379 1518 aa22.52■■□□□ 1.2
PUDPP2-202ENST00000628080 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
PUDPP2-202ENST00000628080 WIZO95785 1651 aa22.4■■□□□ 1.18
PUDPP2-202ENST00000628080 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
PUDPP2-202ENST00000628080 OSCARQ8IYS5 282 aa22.33■■□□□ 1.17
PUDPP2-202ENST00000628080 CFTRP13569 1480 aa22.28■■□□□ 1.16
PUDPP2-202ENST00000628080 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
PUDPP2-202ENST00000628080 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
PUDPP2-202ENST00000628080 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
PUDPP2-202ENST00000628080 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
PUDPP2-202ENST00000628080 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
PUDPP2-202ENST00000628080 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
PUDPP2-202ENST00000628080 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
PUDPP2-202ENST00000628080 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
PUDPP2-202ENST00000628080 ARHGEF11O15085 1522 aa21.93■■□□□ 1.1
PUDPP2-202ENST00000628080 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
PUDPP2-202ENST00000628080 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
PUDPP2-202ENST00000628080 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
PUDPP2-202ENST00000628080 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
PUDPP2-202ENST00000628080 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
PUDPP2-202ENST00000628080 CYB5RLQ6IPT4 315 aa21.82■■□□□ 1.08
PUDPP2-202ENST00000628080 EIF4G3O43432 1585 aaKnown RBP21.81■■□□□ 1.08
PUDPP2-202ENST00000628080 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
PUDPP2-202ENST00000628080 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.07
PUDPP2-202ENST00000628080 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
PUDPP2-202ENST00000628080 TARBP1Q13395 1621 aaKnown RBP21.7■■□□□ 1.06
PUDPP2-202ENST00000628080 FBLN2P98095 1184 aa21.7■■□□□ 1.06
PUDPP2-202ENST00000628080 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
PUDPP2-202ENST00000628080 CHD1O14646 1710 aa21.67■■□□□ 1.06
PUDPP2-202ENST00000628080 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
PUDPP2-202ENST00000628080 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
PUDPP2-202ENST00000628080 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
PUDPP2-202ENST00000628080 SOGA1O94964 1423 aa21.56■■□□□ 1.04
PUDPP2-202ENST00000628080 SNAPC4Q5SXM2 1469 aa21.51■■□□□ 1.03
PUDPP2-202ENST00000628080 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
PUDPP2-202ENST00000628080 CLASP1Q7Z460 1538 aa21.48■■□□□ 1.03
PUDPP2-202ENST00000628080 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
PUDPP2-202ENST00000628080 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
PUDPP2-202ENST00000628080 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
PUDPP2-202ENST00000628080 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
PUDPP2-202ENST00000628080 GRIN2BQ13224 1484 aa21.41■■□□□ 1.02
PUDPP2-202ENST00000628080 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
PUDPP2-202ENST00000628080 CUX1P39880 1505 aa21.37■■□□□ 1.01
PUDPP2-202ENST00000628080 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
PUDPP2-202ENST00000628080 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
PUDPP2-202ENST00000628080 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
PUDPP2-202ENST00000628080 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
PUDPP2-202ENST00000628080 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
PUDPP2-202ENST00000628080 GRIN2AQ12879 1464 aa21.13■□□□□ 0.97
PUDPP2-202ENST00000628080 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
PUDPP2-202ENST00000628080 NUP160Q12769 1436 aa21.08■□□□□ 0.97
PUDPP2-202ENST00000628080 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
PUDPP2-202ENST00000628080 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
PUDPP2-202ENST00000628080 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
PUDPP2-202ENST00000628080 FHAD1B1AJZ9 1412 aa21.01■□□□□ 0.95
PUDPP2-202ENST00000628080 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
PUDPP2-202ENST00000628080 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
PUDPP2-202ENST00000628080 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
PUDPP2-202ENST00000628080 PRG4Q92954 1404 aaPredicted RBP20.91■□□□□ 0.94
PUDPP2-202ENST00000628080 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
PUDPP2-202ENST00000628080 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
PUDPP2-202ENST00000628080 JPH4Q96JJ6 628 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms