RNA–Protein interactions for RNA: ENST00000627535.2

GRIN2B-202, Transcript of glutamate ionotropic receptor NMDA type subunit 2B, humanhuman

TSL 5

Gene GRIN2B, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2B-202ENST00000627535 AEBP2Q6ZN18 517 aaPredicted RBP33.92■■■■□ 3.02
GRIN2B-202ENST00000627535 CHIC1Q5VXU3 224 aa32.15■■■□□ 2.74
GRIN2B-202ENST00000627535 NISCHQ9Y2I1 1504 aa30.75■■■□□ 2.51
GRIN2B-202ENST00000627535 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
GRIN2B-202ENST00000627535 PHF23Q9BUL5 403 aaPredicted RBP28.42■■■□□ 2.14
GRIN2B-202ENST00000627535 ABCC9O60706 1549 aa28.28■■■□□ 2.12
GRIN2B-202ENST00000627535 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.06
GRIN2B-202ENST00000627535 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
GRIN2B-202ENST00000627535 FOXD1Q16676 465 aa26.89■■□□□ 1.9
GRIN2B-202ENST00000627535 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
GRIN2B-202ENST00000627535 NACADO15069 1562 aa26.46■■□□□ 1.83
GRIN2B-202ENST00000627535 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
GRIN2B-202ENST00000627535 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.78
GRIN2B-202ENST00000627535 DCAF8L2P0C7V8 631 aa26.09■■□□□ 1.77
GRIN2B-202ENST00000627535 BICRAQ9NZM4 1560 aa25.98■■□□□ 1.75
GRIN2B-202ENST00000627535 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
GRIN2B-202ENST00000627535 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
GRIN2B-202ENST00000627535 SHROOM4Q9ULL8 1493 aa25.63■■□□□ 1.69
GRIN2B-202ENST00000627535 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
GRIN2B-202ENST00000627535 CECR2Q9BXF3 1484 aa25.55■■□□□ 1.68
GRIN2B-202ENST00000627535 DCAF1Q9Y4B6 1507 aa25.41■■□□□ 1.66
GRIN2B-202ENST00000627535 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
GRIN2B-202ENST00000627535 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
GRIN2B-202ENST00000627535 SCRIBQ14160 1630 aa25.32■■□□□ 1.64
GRIN2B-202ENST00000627535 PPP6R1Q9UPN7 881 aa25.25■■□□□ 1.63
GRIN2B-202ENST00000627535 DNAJC5Q9H3Z4 198 aa25.15■■□□□ 1.62
GRIN2B-202ENST00000627535 ADRA2BP18089 450 aa25.12■■□□□ 1.61
GRIN2B-202ENST00000627535 PIAS4Q8N2W9 510 aaPredicted RBP25.06■■□□□ 1.6
GRIN2B-202ENST00000627535 MSH5O43196 834 aa24.99■■□□□ 1.59
GRIN2B-202ENST00000627535 CUX2O14529 1486 aa24.64■■□□□ 1.53
GRIN2B-202ENST00000627535 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
GRIN2B-202ENST00000627535 POTEDQ86YR6 584 aa24.42■■□□□ 1.5
GRIN2B-202ENST00000627535 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
GRIN2B-202ENST00000627535 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
GRIN2B-202ENST00000627535 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
GRIN2B-202ENST00000627535 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
GRIN2B-202ENST00000627535 NESP48681 1621 aa24.15■■□□□ 1.46
GRIN2B-202ENST00000627535 SMARCA4P51532 1647 aa24.12■■□□□ 1.45
GRIN2B-202ENST00000627535 THOC2Q8NI27 1593 aaKnown RBP24.07■■□□□ 1.44
GRIN2B-202ENST00000627535 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
GRIN2B-202ENST00000627535 LAMC3Q9Y6N6 1575 aa23.96■■□□□ 1.43
GRIN2B-202ENST00000627535 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
GRIN2B-202ENST00000627535 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
GRIN2B-202ENST00000627535 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
GRIN2B-202ENST00000627535 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
GRIN2B-202ENST00000627535 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
GRIN2B-202ENST00000627535 MROH2BQ7Z745 1585 aa23.67■■□□□ 1.38
GRIN2B-202ENST00000627535 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
GRIN2B-202ENST00000627535 WDR62O43379 1518 aa23.61■■□□□ 1.37
GRIN2B-202ENST00000627535 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
GRIN2B-202ENST00000627535 CEP164Q9UPV0 1460 aa23.44■■□□□ 1.34
GRIN2B-202ENST00000627535 WIZO95785 1651 aa23.39■■□□□ 1.34
GRIN2B-202ENST00000627535 OSCARQ8IYS5 282 aa23.37■■□□□ 1.33
GRIN2B-202ENST00000627535 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
GRIN2B-202ENST00000627535 CFTRP13569 1480 aa23.25■■□□□ 1.31
GRIN2B-202ENST00000627535 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
GRIN2B-202ENST00000627535 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
GRIN2B-202ENST00000627535 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
GRIN2B-202ENST00000627535 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
GRIN2B-202ENST00000627535 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
GRIN2B-202ENST00000627535 MAPK8IP2Q13387 824 aaPredicted RBP23.08■■□□□ 1.29
GRIN2B-202ENST00000627535 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
GRIN2B-202ENST00000627535 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
GRIN2B-202ENST00000627535 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
GRIN2B-202ENST00000627535 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
GRIN2B-202ENST00000627535 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
GRIN2B-202ENST00000627535 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
GRIN2B-202ENST00000627535 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
GRIN2B-202ENST00000627535 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
GRIN2B-202ENST00000627535 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
GRIN2B-202ENST00000627535 CHD1O14646 1710 aa22.84■■□□□ 1.25
GRIN2B-202ENST00000627535 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
GRIN2B-202ENST00000627535 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
GRIN2B-202ENST00000627535 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
GRIN2B-202ENST00000627535 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
GRIN2B-202ENST00000627535 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
GRIN2B-202ENST00000627535 TRHP20396 242 aaPredicted RBP22.75■■□□□ 1.23
GRIN2B-202ENST00000627535 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
GRIN2B-202ENST00000627535 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.22
GRIN2B-202ENST00000627535 FBLN2P98095 1184 aa22.63■■□□□ 1.21
GRIN2B-202ENST00000627535 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
GRIN2B-202ENST00000627535 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
GRIN2B-202ENST00000627535 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
GRIN2B-202ENST00000627535 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
GRIN2B-202ENST00000627535 RAD54L2Q9Y4B4 1467 aa22.49■■□□□ 1.19
GRIN2B-202ENST00000627535 SYNJ1O43426 1573 aa22.48■■□□□ 1.19
GRIN2B-202ENST00000627535 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
GRIN2B-202ENST00000627535 TDRD9Q8NDG6 1382 aaKnown RBP22.46■■□□□ 1.19
GRIN2B-202ENST00000627535 SOGA1O94964 1423 aa22.46■■□□□ 1.19
GRIN2B-202ENST00000627535 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
GRIN2B-202ENST00000627535 CHMP7Q8WUX9 453 aaPredicted RBP22.4■■□□□ 1.18
GRIN2B-202ENST00000627535 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
GRIN2B-202ENST00000627535 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
GRIN2B-202ENST00000627535 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
GRIN2B-202ENST00000627535 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
GRIN2B-202ENST00000627535 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
GRIN2B-202ENST00000627535 CUX1P39880 1505 aa22.28■■□□□ 1.16
GRIN2B-202ENST00000627535 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
GRIN2B-202ENST00000627535 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
GRIN2B-202ENST00000627535 ERCC6L2Q5T890 1561 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms