RNA–Protein interactions for RNA: ENST00000626262.2

UBAP1-205, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2

Gene UBAP1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-205ENST00000626262 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
UBAP1-205ENST00000626262 CCDC180Q9P1Z9 1646 aa39.72■■■■□ 3.95
UBAP1-205ENST00000626262 ZCCHC6Q5VYS8 1495 aaKnown RBP38.43■■■■□ 3.74
UBAP1-205ENST00000626262 DCAF1Q9Y4B6 1507 aa37.76■■■■□ 3.64
UBAP1-205ENST00000626262 DCAF8L2P0C7V8 631 aa37.5■■■■□ 3.59
UBAP1-205ENST00000626262 SHROOM4Q9ULL8 1493 aa37.42■■■■□ 3.58
UBAP1-205ENST00000626262 ABCC9O60706 1549 aa37.19■■■■□ 3.54
UBAP1-205ENST00000626262 MYO15BQ96JP2 1530 aa37.19■■■■□ 3.54
UBAP1-205ENST00000626262 NACADO15069 1562 aa36.87■■■■□ 3.49
UBAP1-205ENST00000626262 SCRIBQ14160 1630 aa36.54■■■■□ 3.44
UBAP1-205ENST00000626262 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
UBAP1-205ENST00000626262 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
UBAP1-205ENST00000626262 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
UBAP1-205ENST00000626262 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
UBAP1-205ENST00000626262 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
UBAP1-205ENST00000626262 BICRAQ9NZM4 1560 aa35.39■■■■□ 3.26
UBAP1-205ENST00000626262 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
UBAP1-205ENST00000626262 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
UBAP1-205ENST00000626262 PABPN1Q86U42 306 aaKnown RBP eCLIP35.09■■■■□ 3.21
UBAP1-205ENST00000626262 SMARCA4P51532 1647 aa35.06■■■■□ 3.2
UBAP1-205ENST00000626262 WIZO95785 1651 aa35.04■■■■□ 3.2
UBAP1-205ENST00000626262 CHIC1Q5VXU3 224 aa34.77■■■■□ 3.16
UBAP1-205ENST00000626262 TOP2AP11388 1531 aaKnown RBP34.68■■■■□ 3.14
UBAP1-205ENST00000626262 PEG3Q9GZU2 1588 aa34.62■■■■□ 3.13
UBAP1-205ENST00000626262 SMARCA2P51531 1590 aa34.37■■■■□ 3.09
UBAP1-205ENST00000626262 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
UBAP1-205ENST00000626262 CCDC88BA6NC98 1476 aa34.29■■■■□ 3.08
UBAP1-205ENST00000626262 EIF4G1Q04637 1599 aaKnown RBP34.29■■■■□ 3.08
UBAP1-205ENST00000626262 BAZ1BQ9UIG0 1483 aaKnown RBP34.19■■■■□ 3.06
UBAP1-205ENST00000626262 HMGXB3Q12766 1538 aa34.02■■■■□ 3.04
UBAP1-205ENST00000626262 NCAPD3P42695 1498 aa33.99■■■■□ 3.03
UBAP1-205ENST00000626262 TRIM41Q8WV44 630 aa33.96■■■■□ 3.03
UBAP1-205ENST00000626262 ABCC8Q09428 1581 aa33.71■■■□□ 2.99
UBAP1-205ENST00000626262 CC2D2AQ9P2K1 1620 aa33.7■■■□□ 2.99
UBAP1-205ENST00000626262 LOC105371045A0A1W2PR82 267 aa33.44■■■□□ 2.94
UBAP1-205ENST00000626262 WRNQ14191 1432 aaPredicted RBP eCLIP33.43■■■□□ 2.94
UBAP1-205ENST00000626262 CFTRP13569 1480 aa33.34■■■□□ 2.93
UBAP1-205ENST00000626262 FAM9AQ8IZU1 332 aaPredicted RBP33.34■■■□□ 2.93
UBAP1-205ENST00000626262 SYNJ1O43426 1573 aa33.32■■■□□ 2.92
UBAP1-205ENST00000626262 PRDM2Q13029 1718 aa33.3■■■□□ 2.92
UBAP1-205ENST00000626262 TOP2BQ02880 1626 aa33.16■■■□□ 2.9
UBAP1-205ENST00000626262 BIVM-ERCC5R4GMW8 1640 aa33.15■■■□□ 2.9
UBAP1-205ENST00000626262 CADPSQ9ULU8 1353 aa33.13■■■□□ 2.89
UBAP1-205ENST00000626262 EEA1Q15075 1411 aa33.12■■■□□ 2.89
UBAP1-205ENST00000626262 SOGA1O94964 1423 aa33.11■■■□□ 2.89
UBAP1-205ENST00000626262 CUX1P39880 1505 aa32.98■■■□□ 2.87
UBAP1-205ENST00000626262 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
UBAP1-205ENST00000626262 CSRNP3Q8WYN3 585 aa32.86■■■□□ 2.85
UBAP1-205ENST00000626262 EHMT2Q96KQ7 1210 aa32.85■■■□□ 2.85
UBAP1-205ENST00000626262 LAMC3Q9Y6N6 1575 aa32.83■■■□□ 2.85
UBAP1-205ENST00000626262 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
UBAP1-205ENST00000626262 NESP48681 1621 aa32.76■■■□□ 2.84
UBAP1-205ENST00000626262 KIF21BO75037 1637 aa32.72■■■□□ 2.83
UBAP1-205ENST00000626262 GOLGA3Q08378 1498 aa32.69■■■□□ 2.82
UBAP1-205ENST00000626262 DNAJC5BQ9UF47 199 aa32.66■■■□□ 2.82
UBAP1-205ENST00000626262 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
UBAP1-205ENST00000626262 TNIKQ9UKE5 1360 aa32.62■■■□□ 2.81
UBAP1-205ENST00000626262 DNMBPQ6XZF7 1577 aa32.59■■■□□ 2.81
UBAP1-205ENST00000626262 FGD5Q6ZNL6 1462 aa32.56■■■□□ 2.8
UBAP1-205ENST00000626262 KIF27Q86VH2 1401 aa32.55■■■□□ 2.8
UBAP1-205ENST00000626262 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.8
UBAP1-205ENST00000626262 TOPBP1Q92547 1522 aa32.49■■■□□ 2.79
UBAP1-205ENST00000626262 CEP162Q5TB80 1403 aa32.49■■■□□ 2.79
UBAP1-205ENST00000626262 UBTFP17480 764 aaKnown RBP32.46■■■□□ 2.79
UBAP1-205ENST00000626262 KIF21AQ7Z4S6 1674 aa32.44■■■□□ 2.78
UBAP1-205ENST00000626262 RAPGEF2Q9Y4G8 1499 aa32.44■■■□□ 2.78
UBAP1-205ENST00000626262 ERICH3Q5RHP9 1530 aa32.44■■■□□ 2.78
UBAP1-205ENST00000626262 PRXQ9BXM0 1461 aa32.42■■■□□ 2.78
UBAP1-205ENST00000626262 CUX2O14529 1486 aa32.39■■■□□ 2.78
UBAP1-205ENST00000626262 URB2Q14146 1524 aaKnown RBP32.38■■■□□ 2.77
UBAP1-205ENST00000626262 POLA1P09884 1462 aaPredicted RBP32.36■■■□□ 2.77
UBAP1-205ENST00000626262 ABCA10Q8WWZ4 1543 aa32.28■■■□□ 2.76
UBAP1-205ENST00000626262 PCGF6Q9BYE7 350 aa32.26■■■□□ 2.75
UBAP1-205ENST00000626262 RAD54L2Q9Y4B4 1467 aa32.23■■■□□ 2.75
UBAP1-205ENST00000626262 WDR97A6NE52 1622 aa32.22■■■□□ 2.75
UBAP1-205ENST00000626262 IGF1RP08069 1367 aa32.2■■■□□ 2.74
UBAP1-205ENST00000626262 TRIM26Q12899 539 aaPredicted RBP32.19■■■□□ 2.74
UBAP1-205ENST00000626262 CLIP1P30622 1438 aa32.15■■■□□ 2.74
UBAP1-205ENST00000626262 MRC2Q9UBG0 1479 aa32.11■■■□□ 2.73
UBAP1-205ENST00000626262 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
UBAP1-205ENST00000626262 ABCA5Q8WWZ7 1642 aa32.03■■■□□ 2.72
UBAP1-205ENST00000626262 CUL7Q14999 1698 aa32.01■■■□□ 2.72
UBAP1-205ENST00000626262 TARBP1Q13395 1621 aaKnown RBP32.01■■■□□ 2.71
UBAP1-205ENST00000626262 WDR62O43379 1518 aa31.95■■■□□ 2.71
UBAP1-205ENST00000626262 VPS8Q8N3P4 1428 aa31.94■■■□□ 2.7
UBAP1-205ENST00000626262 GAPVD1Q14C86 1478 aa31.89■■■□□ 2.7
UBAP1-205ENST00000626262 TDRD9Q8NDG6 1382 aaKnown RBP31.86■■■□□ 2.69
UBAP1-205ENST00000626262 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
UBAP1-205ENST00000626262 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
UBAP1-205ENST00000626262 RANGAP1P46060 587 aaPredicted RBP31.83■■■□□ 2.69
UBAP1-205ENST00000626262 ARAP1Q96P48 1450 aa31.83■■■□□ 2.69
UBAP1-205ENST00000626262 THOC2Q8NI27 1593 aaKnown RBP31.8■■■□□ 2.68
UBAP1-205ENST00000626262 PBRM1Q86U86 1689 aa31.77■■■□□ 2.68
UBAP1-205ENST00000626262 IFT140Q96RY7 1462 aa31.76■■■□□ 2.67
UBAP1-205ENST00000626262 ARHGAP35Q9NRY4 1499 aa31.76■■■□□ 2.67
UBAP1-205ENST00000626262 CTTNBP2Q8WZ74 1663 aa31.74■■■□□ 2.67
UBAP1-205ENST00000626262 AQRO60306 1485 aaKnown RBP eCLIP31.62■■■□□ 2.653e-7■■■■□ 19.7
UBAP1-205ENST00000626262 HRCP23327 699 aa31.61■■■□□ 2.65
UBAP1-205ENST00000626262 GRIN2BQ13224 1484 aa31.59■■■□□ 2.65
UBAP1-205ENST00000626262 ADAMTS12P58397 1594 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms