RNA–Protein interactions for RNA: ENST00000625925.2

TCF4-251, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-251ENST00000625925 NISCHQ9Y2I1 1504 aa20.39■□□□□ 0.85
TCF4-251ENST00000625925 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
TCF4-251ENST00000625925 ABCC9O60706 1549 aa17.76■□□□□ 0.43
TCF4-251ENST00000625925 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
TCF4-251ENST00000625925 NACADO15069 1562 aa17.22■□□□□ 0.35
TCF4-251ENST00000625925 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
TCF4-251ENST00000625925 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
TCF4-251ENST00000625925 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
TCF4-251ENST00000625925 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
TCF4-251ENST00000625925 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
TCF4-251ENST00000625925 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
TCF4-251ENST00000625925 BICRAQ9NZM4 1560 aa16.68■□□□□ 0.26
TCF4-251ENST00000625925 SCRIBQ14160 1630 aa16.52■□□□□ 0.24
TCF4-251ENST00000625925 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
TCF4-251ENST00000625925 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
TCF4-251ENST00000625925 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
TCF4-251ENST00000625925 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
TCF4-251ENST00000625925 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
TCF4-251ENST00000625925 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
TCF4-251ENST00000625925 SMARCA4P51532 1647 aa15.9■□□□□ 0.14
TCF4-251ENST00000625925 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
TCF4-251ENST00000625925 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
TCF4-251ENST00000625925 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.13
TCF4-251ENST00000625925 HMGXB3Q12766 1538 aa15.83■□□□□ 0.12
TCF4-251ENST00000625925 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
TCF4-251ENST00000625925 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
TCF4-251ENST00000625925 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
TCF4-251ENST00000625925 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
TCF4-251ENST00000625925 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
TCF4-251ENST00000625925 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
TCF4-251ENST00000625925 WIZO95785 1651 aa15.5■□□□□ 0.07
TCF4-251ENST00000625925 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
TCF4-251ENST00000625925 CUX2O14529 1486 aa15.4■□□□□ 0.06
TCF4-251ENST00000625925 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
TCF4-251ENST00000625925 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
TCF4-251ENST00000625925 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
TCF4-251ENST00000625925 NESP48681 1621 aa15.34■□□□□ 0.05
TCF4-251ENST00000625925 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
TCF4-251ENST00000625925 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
TCF4-251ENST00000625925 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
TCF4-251ENST00000625925 CADPSQ9ULU8 1353 aa15.28■□□□□ 0.04
TCF4-251ENST00000625925 CFTRP13569 1480 aa15.22■□□□□ 0.03
TCF4-251ENST00000625925 WDR62O43379 1518 aa15.17■□□□□ 0.02
TCF4-251ENST00000625925 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
TCF4-251ENST00000625925 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
TCF4-251ENST00000625925 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
TCF4-251ENST00000625925 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
TCF4-251ENST00000625925 ABCC8Q09428 1581 aa14.98□□□□□ -0.01
TCF4-251ENST00000625925 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
TCF4-251ENST00000625925 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
TCF4-251ENST00000625925 DNAJC5Q9H3Z4 198 aa14.89□□□□□ -0.03
TCF4-251ENST00000625925 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
TCF4-251ENST00000625925 IFT140Q96RY7 1462 aa14.84□□□□□ -0.03
TCF4-251ENST00000625925 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
TCF4-251ENST00000625925 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
TCF4-251ENST00000625925 EIF4G3O43432 1585 aaKnown RBP14.76□□□□□ -0.05
TCF4-251ENST00000625925 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
TCF4-251ENST00000625925 CUX1P39880 1505 aa14.71□□□□□ -0.06
TCF4-251ENST00000625925 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
TCF4-251ENST00000625925 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
TCF4-251ENST00000625925 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
TCF4-251ENST00000625925 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
TCF4-251ENST00000625925 TOP2BQ02880 1626 aa14.64□□□□□ -0.07
TCF4-251ENST00000625925 CHD1O14646 1710 aa14.63□□□□□ -0.07
TCF4-251ENST00000625925 SOGA1O94964 1423 aa14.61□□□□□ -0.07
TCF4-251ENST00000625925 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
TCF4-251ENST00000625925 ABCA5Q8WWZ7 1642 aa14.59□□□□□ -0.07
TCF4-251ENST00000625925 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
TCF4-251ENST00000625925 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
TCF4-251ENST00000625925 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
TCF4-251ENST00000625925 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
TCF4-251ENST00000625925 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
TCF4-251ENST00000625925 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCF4-251ENST00000625925 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
TCF4-251ENST00000625925 GRIN2BQ13224 1484 aa14.53□□□□□ -0.08
TCF4-251ENST00000625925 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
TCF4-251ENST00000625925 SYNJ2O15056 1496 aa14.48□□□□□ -0.09
TCF4-251ENST00000625925 SNAPC4Q5SXM2 1469 aa14.48□□□□□ -0.09
TCF4-251ENST00000625925 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
TCF4-251ENST00000625925 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
TCF4-251ENST00000625925 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
TCF4-251ENST00000625925 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
TCF4-251ENST00000625925 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
TCF4-251ENST00000625925 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
TCF4-251ENST00000625925 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
TCF4-251ENST00000625925 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
TCF4-251ENST00000625925 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
TCF4-251ENST00000625925 CUL7Q14999 1698 aa14.35□□□□□ -0.11
TCF4-251ENST00000625925 FHAD1B1AJZ9 1412 aa14.33□□□□□ -0.11
TCF4-251ENST00000625925 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
TCF4-251ENST00000625925 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
TCF4-251ENST00000625925 NUP160Q12769 1436 aa14.31□□□□□ -0.12
TCF4-251ENST00000625925 CEP170Q5SW79 1584 aa14.29□□□□□ -0.12
TCF4-251ENST00000625925 FBLN2P98095 1184 aa14.28□□□□□ -0.12
TCF4-251ENST00000625925 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
TCF4-251ENST00000625925 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
TCF4-251ENST00000625925 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
TCF4-251ENST00000625925 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
TCF4-251ENST00000625925 IGF1RP08069 1367 aa14.16□□□□□ -0.14
TCF4-251ENST00000625925 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms