RNA–Protein interactions for RNA: ENST00000625300.1

MECP2-214, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 350 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-214ENST00000625300 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
MECP2-214ENST00000625300 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
MECP2-214ENST00000625300 ABCC9O60706 1549 aa19.03■□□□□ 0.64
MECP2-214ENST00000625300 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
MECP2-214ENST00000625300 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
MECP2-214ENST00000625300 NACADO15069 1562 aa18.47■□□□□ 0.55
MECP2-214ENST00000625300 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
MECP2-214ENST00000625300 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
MECP2-214ENST00000625300 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
MECP2-214ENST00000625300 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
MECP2-214ENST00000625300 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
MECP2-214ENST00000625300 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.44
MECP2-214ENST00000625300 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
MECP2-214ENST00000625300 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
MECP2-214ENST00000625300 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
MECP2-214ENST00000625300 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
MECP2-214ENST00000625300 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
MECP2-214ENST00000625300 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
MECP2-214ENST00000625300 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
MECP2-214ENST00000625300 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
MECP2-214ENST00000625300 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
MECP2-214ENST00000625300 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
MECP2-214ENST00000625300 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
MECP2-214ENST00000625300 ATAD2BQ9ULI0 1458 aa16.99■□□□□ 0.31
MECP2-214ENST00000625300 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
MECP2-214ENST00000625300 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
MECP2-214ENST00000625300 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
MECP2-214ENST00000625300 WIZO95785 1651 aa16.92■□□□□ 0.3
MECP2-214ENST00000625300 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
MECP2-214ENST00000625300 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.28
MECP2-214ENST00000625300 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
MECP2-214ENST00000625300 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
MECP2-214ENST00000625300 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
MECP2-214ENST00000625300 NESP48681 1621 aa16.49■□□□□ 0.23
MECP2-214ENST00000625300 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
MECP2-214ENST00000625300 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
MECP2-214ENST00000625300 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
MECP2-214ENST00000625300 KIF21AQ7Z4S6 1674 aa16.44■□□□□ 0.22
MECP2-214ENST00000625300 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
MECP2-214ENST00000625300 CFTRP13569 1480 aa16.42■□□□□ 0.22
MECP2-214ENST00000625300 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
MECP2-214ENST00000625300 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
MECP2-214ENST00000625300 THOC2Q8NI27 1593 aaKnown RBP16.3■□□□□ 0.2
MECP2-214ENST00000625300 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
MECP2-214ENST00000625300 CUX2O14529 1486 aa16.22■□□□□ 0.19
MECP2-214ENST00000625300 WDR62O43379 1518 aa16.19■□□□□ 0.18
MECP2-214ENST00000625300 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
MECP2-214ENST00000625300 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
MECP2-214ENST00000625300 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
MECP2-214ENST00000625300 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
MECP2-214ENST00000625300 CUX1P39880 1505 aa15.99■□□□□ 0.15
MECP2-214ENST00000625300 BIVM-ERCC5R4GMW8 1640 aa15.99■□□□□ 0.15
MECP2-214ENST00000625300 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
MECP2-214ENST00000625300 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
MECP2-214ENST00000625300 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
MECP2-214ENST00000625300 POLA1P09884 1462 aaPredicted RBP15.94■□□□□ 0.14
MECP2-214ENST00000625300 FGD5Q6ZNL6 1462 aa15.93■□□□□ 0.14
MECP2-214ENST00000625300 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
MECP2-214ENST00000625300 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
MECP2-214ENST00000625300 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
MECP2-214ENST00000625300 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
MECP2-214ENST00000625300 SOGA1O94964 1423 aa15.85■□□□□ 0.13
MECP2-214ENST00000625300 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
MECP2-214ENST00000625300 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
MECP2-214ENST00000625300 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
MECP2-214ENST00000625300 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
MECP2-214ENST00000625300 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
MECP2-214ENST00000625300 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.11
MECP2-214ENST00000625300 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
MECP2-214ENST00000625300 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
MECP2-214ENST00000625300 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
MECP2-214ENST00000625300 CHD1O14646 1710 aa15.68■□□□□ 0.1
MECP2-214ENST00000625300 MAGI1Q96QZ7 1491 aaPredicted RBP15.66■□□□□ 0.1
MECP2-214ENST00000625300 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
MECP2-214ENST00000625300 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
MECP2-214ENST00000625300 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
MECP2-214ENST00000625300 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
MECP2-214ENST00000625300 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
MECP2-214ENST00000625300 CUL7Q14999 1698 aa15.6■□□□□ 0.09
MECP2-214ENST00000625300 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
MECP2-214ENST00000625300 FBLN2P98095 1184 aa15.53■□□□□ 0.08
MECP2-214ENST00000625300 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
MECP2-214ENST00000625300 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
MECP2-214ENST00000625300 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
MECP2-214ENST00000625300 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
MECP2-214ENST00000625300 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
MECP2-214ENST00000625300 EEA1Q15075 1411 aa15.47■□□□□ 0.07
MECP2-214ENST00000625300 IGF1RP08069 1367 aa15.44■□□□□ 0.06
MECP2-214ENST00000625300 CLASP1Q7Z460 1538 aa15.43■□□□□ 0.06
MECP2-214ENST00000625300 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
MECP2-214ENST00000625300 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
MECP2-214ENST00000625300 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
MECP2-214ENST00000625300 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
MECP2-214ENST00000625300 NUP160Q12769 1436 aa15.38■□□□□ 0.05
MECP2-214ENST00000625300 RAPGEF2Q9Y4G8 1499 aa15.38■□□□□ 0.05
MECP2-214ENST00000625300 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
MECP2-214ENST00000625300 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
MECP2-214ENST00000625300 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
MECP2-214ENST00000625300 SHROOM2Q13796 1616 aa15.33■□□□□ 0.04
MECP2-214ENST00000625300 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms