RNA–Protein interactions for RNA: ENST00000620724.4

SGPL1-208, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 5

Gene SGPL1, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-208ENST00000620724 NISCHQ9Y2I1 1504 aa27.19■■□□□ 1.94
SGPL1-208ENST00000620724 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
SGPL1-208ENST00000620724 ABCC9O60706 1549 aa24.24■■□□□ 1.47
SGPL1-208ENST00000620724 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
SGPL1-208ENST00000620724 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
SGPL1-208ENST00000620724 NACADO15069 1562 aa22.91■■□□□ 1.26
SGPL1-208ENST00000620724 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
SGPL1-208ENST00000620724 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
SGPL1-208ENST00000620724 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
SGPL1-208ENST00000620724 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
SGPL1-208ENST00000620724 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
SGPL1-208ENST00000620724 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
SGPL1-208ENST00000620724 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
SGPL1-208ENST00000620724 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
SGPL1-208ENST00000620724 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
SGPL1-208ENST00000620724 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
SGPL1-208ENST00000620724 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
SGPL1-208ENST00000620724 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
SGPL1-208ENST00000620724 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
SGPL1-208ENST00000620724 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
SGPL1-208ENST00000620724 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
SGPL1-208ENST00000620724 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
SGPL1-208ENST00000620724 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
SGPL1-208ENST00000620724 MROH2BQ7Z745 1585 aa21.01■□□□□ 0.95
SGPL1-208ENST00000620724 HMGXB3Q12766 1538 aa21■□□□□ 0.95
SGPL1-208ENST00000620724 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
SGPL1-208ENST00000620724 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
SGPL1-208ENST00000620724 NESP48681 1621 aa20.91■□□□□ 0.94
SGPL1-208ENST00000620724 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
SGPL1-208ENST00000620724 WIZO95785 1651 aa20.76■□□□□ 0.91
SGPL1-208ENST00000620724 CUX2O14529 1486 aa20.73■□□□□ 0.91
SGPL1-208ENST00000620724 DNAJC5Q9H3Z4 198 aa20.68■□□□□ 0.9
SGPL1-208ENST00000620724 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
SGPL1-208ENST00000620724 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
SGPL1-208ENST00000620724 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
SGPL1-208ENST00000620724 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
SGPL1-208ENST00000620724 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
SGPL1-208ENST00000620724 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
SGPL1-208ENST00000620724 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
SGPL1-208ENST00000620724 CFTRP13569 1480 aa20.36■□□□□ 0.85
SGPL1-208ENST00000620724 MRC2Q9UBG0 1479 aa20.36■□□□□ 0.85
SGPL1-208ENST00000620724 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
SGPL1-208ENST00000620724 WDR62O43379 1518 aa20.31■□□□□ 0.84
SGPL1-208ENST00000620724 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
SGPL1-208ENST00000620724 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
SGPL1-208ENST00000620724 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
SGPL1-208ENST00000620724 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
SGPL1-208ENST00000620724 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
SGPL1-208ENST00000620724 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
SGPL1-208ENST00000620724 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
SGPL1-208ENST00000620724 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
SGPL1-208ENST00000620724 DNMBPQ6XZF7 1577 aa19.87■□□□□ 0.77
SGPL1-208ENST00000620724 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
SGPL1-208ENST00000620724 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
SGPL1-208ENST00000620724 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
SGPL1-208ENST00000620724 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
SGPL1-208ENST00000620724 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
SGPL1-208ENST00000620724 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
SGPL1-208ENST00000620724 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
SGPL1-208ENST00000620724 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
SGPL1-208ENST00000620724 EIF4G3O43432 1585 aaKnown RBP19.75■□□□□ 0.75
SGPL1-208ENST00000620724 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
SGPL1-208ENST00000620724 CUX1P39880 1505 aa19.71■□□□□ 0.75
SGPL1-208ENST00000620724 SOGA1O94964 1423 aa19.69■□□□□ 0.74
SGPL1-208ENST00000620724 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
SGPL1-208ENST00000620724 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
SGPL1-208ENST00000620724 CHD1O14646 1710 aa19.61■□□□□ 0.73
SGPL1-208ENST00000620724 RIMBP3CA6NJZ7 1639 aa19.61■□□□□ 0.73
SGPL1-208ENST00000620724 RIMBP3BA6NNM3 1639 aa19.61■□□□□ 0.73
SGPL1-208ENST00000620724 RIMBP3Q9UFD9 1639 aa19.61■□□□□ 0.73
SGPL1-208ENST00000620724 FBLN2P98095 1184 aa19.59■□□□□ 0.73
SGPL1-208ENST00000620724 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
SGPL1-208ENST00000620724 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
SGPL1-208ENST00000620724 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
SGPL1-208ENST00000620724 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
SGPL1-208ENST00000620724 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
SGPL1-208ENST00000620724 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
SGPL1-208ENST00000620724 GAPVD1Q14C86 1478 aa19.43■□□□□ 0.7
SGPL1-208ENST00000620724 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
SGPL1-208ENST00000620724 MAGI1Q96QZ7 1491 aaPredicted RBP19.42■□□□□ 0.7
SGPL1-208ENST00000620724 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
SGPL1-208ENST00000620724 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
SGPL1-208ENST00000620724 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
SGPL1-208ENST00000620724 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
SGPL1-208ENST00000620724 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
SGPL1-208ENST00000620724 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
SGPL1-208ENST00000620724 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
SGPL1-208ENST00000620724 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
SGPL1-208ENST00000620724 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
SGPL1-208ENST00000620724 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
SGPL1-208ENST00000620724 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
SGPL1-208ENST00000620724 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
SGPL1-208ENST00000620724 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
SGPL1-208ENST00000620724 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
SGPL1-208ENST00000620724 NUP160Q12769 1436 aa19.17■□□□□ 0.66
SGPL1-208ENST00000620724 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
SGPL1-208ENST00000620724 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
SGPL1-208ENST00000620724 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
SGPL1-208ENST00000620724 IGF1RP08069 1367 aa19.06■□□□□ 0.64
SGPL1-208ENST00000620724 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms