RNA–Protein interactions for RNA: ENST00000620613.1

IGKV2-40-201, Transcript of immunoglobulin kappa variable 2-40, humanhuman

APPRIS P5

Gene IGKV2-40, Length 314 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-40-201ENST00000620613 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
IGKV2-40-201ENST00000620613 ABCC9O60706 1549 aa22.66■■□□□ 1.22
IGKV2-40-201ENST00000620613 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
IGKV2-40-201ENST00000620613 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
IGKV2-40-201ENST00000620613 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
IGKV2-40-201ENST00000620613 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
IGKV2-40-201ENST00000620613 NACADO15069 1562 aa21.31■■□□□ 1
IGKV2-40-201ENST00000620613 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
IGKV2-40-201ENST00000620613 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
IGKV2-40-201ENST00000620613 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
IGKV2-40-201ENST00000620613 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
IGKV2-40-201ENST00000620613 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
IGKV2-40-201ENST00000620613 DCAF1Q9Y4B6 1507 aa20.65■□□□□ 0.9
IGKV2-40-201ENST00000620613 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
IGKV2-40-201ENST00000620613 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
IGKV2-40-201ENST00000620613 SCRIBQ14160 1630 aa20.42■□□□□ 0.86
IGKV2-40-201ENST00000620613 CC2D2AQ9P2K1 1620 aa20.4■□□□□ 0.86
IGKV2-40-201ENST00000620613 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
IGKV2-40-201ENST00000620613 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
IGKV2-40-201ENST00000620613 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
IGKV2-40-201ENST00000620613 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
IGKV2-40-201ENST00000620613 CUX2O14529 1486 aa19.6■□□□□ 0.73
IGKV2-40-201ENST00000620613 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
IGKV2-40-201ENST00000620613 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
IGKV2-40-201ENST00000620613 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
IGKV2-40-201ENST00000620613 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
IGKV2-40-201ENST00000620613 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
IGKV2-40-201ENST00000620613 BAZ1AQ9NRL2 1556 aaPredicted RBP19.4■□□□□ 0.7
IGKV2-40-201ENST00000620613 NESP48681 1621 aa19.4■□□□□ 0.7
IGKV2-40-201ENST00000620613 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
IGKV2-40-201ENST00000620613 MROH2BQ7Z745 1585 aa19.26■□□□□ 0.67
IGKV2-40-201ENST00000620613 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
IGKV2-40-201ENST00000620613 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
IGKV2-40-201ENST00000620613 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
IGKV2-40-201ENST00000620613 CADPSQ9ULU8 1353 aa19.14■□□□□ 0.65
IGKV2-40-201ENST00000620613 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
IGKV2-40-201ENST00000620613 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
IGKV2-40-201ENST00000620613 WIZO95785 1651 aa18.95■□□□□ 0.62
IGKV2-40-201ENST00000620613 WDR62O43379 1518 aa18.92■□□□□ 0.62
IGKV2-40-201ENST00000620613 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
IGKV2-40-201ENST00000620613 TRIM41Q8WV44 630 aa18.89■□□□□ 0.61
IGKV2-40-201ENST00000620613 FANCD2Q9BXW9 1451 aa18.88■□□□□ 0.61
IGKV2-40-201ENST00000620613 CFTRP13569 1480 aa18.86■□□□□ 0.61
IGKV2-40-201ENST00000620613 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
IGKV2-40-201ENST00000620613 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
IGKV2-40-201ENST00000620613 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
IGKV2-40-201ENST00000620613 URB2Q14146 1524 aaKnown RBP18.7■□□□□ 0.58
IGKV2-40-201ENST00000620613 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
IGKV2-40-201ENST00000620613 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
IGKV2-40-201ENST00000620613 ZNF608Q9ULD9 1512 aaPredicted RBP18.51■□□□□ 0.55
IGKV2-40-201ENST00000620613 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
IGKV2-40-201ENST00000620613 TOPBP1Q92547 1522 aa18.48■□□□□ 0.55
IGKV2-40-201ENST00000620613 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
IGKV2-40-201ENST00000620613 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
IGKV2-40-201ENST00000620613 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
IGKV2-40-201ENST00000620613 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
IGKV2-40-201ENST00000620613 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
IGKV2-40-201ENST00000620613 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.53
IGKV2-40-201ENST00000620613 ARHGEF11O15085 1522 aa18.35■□□□□ 0.53
IGKV2-40-201ENST00000620613 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
IGKV2-40-201ENST00000620613 FBLN2P98095 1184 aa18.33■□□□□ 0.52
IGKV2-40-201ENST00000620613 EIF4G3O43432 1585 aaKnown RBP18.31■□□□□ 0.52
IGKV2-40-201ENST00000620613 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
IGKV2-40-201ENST00000620613 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
IGKV2-40-201ENST00000620613 SOGA1O94964 1423 aa18.26■□□□□ 0.51
IGKV2-40-201ENST00000620613 TDRD9Q8NDG6 1382 aaKnown RBP18.25■□□□□ 0.51
IGKV2-40-201ENST00000620613 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
IGKV2-40-201ENST00000620613 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
IGKV2-40-201ENST00000620613 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
IGKV2-40-201ENST00000620613 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
IGKV2-40-201ENST00000620613 CHD1O14646 1710 aa18.15■□□□□ 0.5
IGKV2-40-201ENST00000620613 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
IGKV2-40-201ENST00000620613 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
IGKV2-40-201ENST00000620613 CUX1P39880 1505 aa18.09■□□□□ 0.49
IGKV2-40-201ENST00000620613 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
IGKV2-40-201ENST00000620613 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
IGKV2-40-201ENST00000620613 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
IGKV2-40-201ENST00000620613 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
IGKV2-40-201ENST00000620613 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
IGKV2-40-201ENST00000620613 SYNJ1O43426 1573 aa18.02■□□□□ 0.48
IGKV2-40-201ENST00000620613 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
IGKV2-40-201ENST00000620613 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
IGKV2-40-201ENST00000620613 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
IGKV2-40-201ENST00000620613 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.46
IGKV2-40-201ENST00000620613 ABCA5Q8WWZ7 1642 aa17.85■□□□□ 0.45
IGKV2-40-201ENST00000620613 PBRM1Q86U86 1689 aa17.83■□□□□ 0.45
IGKV2-40-201ENST00000620613 GRIN2AQ12879 1464 aa17.83■□□□□ 0.45
IGKV2-40-201ENST00000620613 NUP160Q12769 1436 aa17.8■□□□□ 0.44
IGKV2-40-201ENST00000620613 FHAD1B1AJZ9 1412 aa17.79■□□□□ 0.44
IGKV2-40-201ENST00000620613 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
IGKV2-40-201ENST00000620613 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
IGKV2-40-201ENST00000620613 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
IGKV2-40-201ENST00000620613 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
IGKV2-40-201ENST00000620613 CEP170Q5SW79 1584 aa17.72■□□□□ 0.43
IGKV2-40-201ENST00000620613 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
IGKV2-40-201ENST00000620613 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
IGKV2-40-201ENST00000620613 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
IGKV2-40-201ENST00000620613 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
IGKV2-40-201ENST00000620613 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
IGKV2-40-201ENST00000620613 NPM1P06748 294 aaKnown RBP eCLIP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms