RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
SYNRG-228ENST00000620424 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
SYNRG-228ENST00000620424 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
SYNRG-228ENST00000620424 ABCC9O60706 1549 aa20.3■□□□□ 0.84
SYNRG-228ENST00000620424 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
SYNRG-228ENST00000620424 DCAF8L2P0C7V8 631 aa19.43■□□□□ 0.7
SYNRG-228ENST00000620424 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
SYNRG-228ENST00000620424 NACADO15069 1562 aa19.36■□□□□ 0.69
SYNRG-228ENST00000620424 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
SYNRG-228ENST00000620424 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
SYNRG-228ENST00000620424 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
SYNRG-228ENST00000620424 UNC13AQ9UPW8 1703 aa19.02■□□□□ 0.63
SYNRG-228ENST00000620424 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYNRG-228ENST00000620424 BICRAQ9NZM4 1560 aa18.9■□□□□ 0.62
SYNRG-228ENST00000620424 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
SYNRG-228ENST00000620424 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
SYNRG-228ENST00000620424 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
SYNRG-228ENST00000620424 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
SYNRG-228ENST00000620424 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
SYNRG-228ENST00000620424 CECR2Q9BXF3 1484 aa18.2■□□□□ 0.5
SYNRG-228ENST00000620424 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
SYNRG-228ENST00000620424 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
SYNRG-228ENST00000620424 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
SYNRG-228ENST00000620424 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
SYNRG-228ENST00000620424 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
SYNRG-228ENST00000620424 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
SYNRG-228ENST00000620424 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
SYNRG-228ENST00000620424 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
SYNRG-228ENST00000620424 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
SYNRG-228ENST00000620424 WIZO95785 1651 aa17.71■□□□□ 0.43
SYNRG-228ENST00000620424 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
SYNRG-228ENST00000620424 NESP48681 1621 aa17.58■□□□□ 0.4
SYNRG-228ENST00000620424 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
SYNRG-228ENST00000620424 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
SYNRG-228ENST00000620424 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
SYNRG-228ENST00000620424 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
SYNRG-228ENST00000620424 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
SYNRG-228ENST00000620424 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
SYNRG-228ENST00000620424 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
SYNRG-228ENST00000620424 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
SYNRG-228ENST00000620424 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
SYNRG-228ENST00000620424 CFTRP13569 1480 aa17.27■□□□□ 0.36
SYNRG-228ENST00000620424 THOC2Q8NI27 1593 aaKnown RBP17.27■□□□□ 0.35
SYNRG-228ENST00000620424 CUX2O14529 1486 aa17.25■□□□□ 0.35
SYNRG-228ENST00000620424 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
SYNRG-228ENST00000620424 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
SYNRG-228ENST00000620424 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
SYNRG-228ENST00000620424 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
SYNRG-228ENST00000620424 WDR62O43379 1518 aa17.11■□□□□ 0.33
SYNRG-228ENST00000620424 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
SYNRG-228ENST00000620424 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
SYNRG-228ENST00000620424 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
SYNRG-228ENST00000620424 DNMBPQ6XZF7 1577 aa16.87■□□□□ 0.29
SYNRG-228ENST00000620424 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
SYNRG-228ENST00000620424 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
SYNRG-228ENST00000620424 CUX1P39880 1505 aa16.8■□□□□ 0.28
SYNRG-228ENST00000620424 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
SYNRG-228ENST00000620424 IFT140Q96RY7 1462 aa16.8■□□□□ 0.28
SYNRG-228ENST00000620424 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
SYNRG-228ENST00000620424 RAD54L2Q9Y4B4 1467 aa16.75■□□□□ 0.27
SYNRG-228ENST00000620424 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
SYNRG-228ENST00000620424 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
SYNRG-228ENST00000620424 SOGA1O94964 1423 aa16.7■□□□□ 0.26
SYNRG-228ENST00000620424 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.265e-8■■■□□ 18.8
SYNRG-228ENST00000620424 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
SYNRG-228ENST00000620424 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
SYNRG-228ENST00000620424 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
SYNRG-228ENST00000620424 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
SYNRG-228ENST00000620424 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
SYNRG-228ENST00000620424 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
SYNRG-228ENST00000620424 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
SYNRG-228ENST00000620424 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
SYNRG-228ENST00000620424 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
SYNRG-228ENST00000620424 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
SYNRG-228ENST00000620424 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
SYNRG-228ENST00000620424 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
SYNRG-228ENST00000620424 CHD1O14646 1710 aa16.49■□□□□ 0.23
SYNRG-228ENST00000620424 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
SYNRG-228ENST00000620424 FBLN2P98095 1184 aa16.47■□□□□ 0.23
SYNRG-228ENST00000620424 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
SYNRG-228ENST00000620424 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
SYNRG-228ENST00000620424 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
SYNRG-228ENST00000620424 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
SYNRG-228ENST00000620424 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
SYNRG-228ENST00000620424 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
SYNRG-228ENST00000620424 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
SYNRG-228ENST00000620424 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
SYNRG-228ENST00000620424 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
SYNRG-228ENST00000620424 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
SYNRG-228ENST00000620424 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
SYNRG-228ENST00000620424 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
SYNRG-228ENST00000620424 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
SYNRG-228ENST00000620424 FHAD1B1AJZ9 1412 aa16.29■□□□□ 0.2
SYNRG-228ENST00000620424 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
SYNRG-228ENST00000620424 IGF1RP08069 1367 aa16.26■□□□□ 0.19
SYNRG-228ENST00000620424 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
SYNRG-228ENST00000620424 NUP160Q12769 1436 aa16.23■□□□□ 0.19
SYNRG-228ENST00000620424 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
SYNRG-228ENST00000620424 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
SYNRG-228ENST00000620424 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms