RNA–Protein interactions for RNA: ENST00000619873.1

SNX18P5-201, Transcript of sorting nexin 18 pseudogene 5, humanhuman

BASIC

Gene SNX18P5, Length 868 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P5-201ENST00000619873 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
SNX18P5-201ENST00000619873 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
SNX18P5-201ENST00000619873 ABCC9O60706 1549 aa19.55■□□□□ 0.72
SNX18P5-201ENST00000619873 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
SNX18P5-201ENST00000619873 NACADO15069 1562 aa18.71■□□□□ 0.59
SNX18P5-201ENST00000619873 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
SNX18P5-201ENST00000619873 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
SNX18P5-201ENST00000619873 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
SNX18P5-201ENST00000619873 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
SNX18P5-201ENST00000619873 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
SNX18P5-201ENST00000619873 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
SNX18P5-201ENST00000619873 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
SNX18P5-201ENST00000619873 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX18P5-201ENST00000619873 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
SNX18P5-201ENST00000619873 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
SNX18P5-201ENST00000619873 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
SNX18P5-201ENST00000619873 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
SNX18P5-201ENST00000619873 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
SNX18P5-201ENST00000619873 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
SNX18P5-201ENST00000619873 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
SNX18P5-201ENST00000619873 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
SNX18P5-201ENST00000619873 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
SNX18P5-201ENST00000619873 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
SNX18P5-201ENST00000619873 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
SNX18P5-201ENST00000619873 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
SNX18P5-201ENST00000619873 HMGXB3Q12766 1538 aa17.17■□□□□ 0.34
SNX18P5-201ENST00000619873 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SNX18P5-201ENST00000619873 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
SNX18P5-201ENST00000619873 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
SNX18P5-201ENST00000619873 WIZO95785 1651 aa16.95■□□□□ 0.3
SNX18P5-201ENST00000619873 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
SNX18P5-201ENST00000619873 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
SNX18P5-201ENST00000619873 NESP48681 1621 aa16.85■□□□□ 0.29
SNX18P5-201ENST00000619873 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
SNX18P5-201ENST00000619873 CUX2O14529 1486 aa16.79■□□□□ 0.28
SNX18P5-201ENST00000619873 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
SNX18P5-201ENST00000619873 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
SNX18P5-201ENST00000619873 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
SNX18P5-201ENST00000619873 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
SNX18P5-201ENST00000619873 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
SNX18P5-201ENST00000619873 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
SNX18P5-201ENST00000619873 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
SNX18P5-201ENST00000619873 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
SNX18P5-201ENST00000619873 CFTRP13569 1480 aa16.55■□□□□ 0.24
SNX18P5-201ENST00000619873 FANCD2Q9BXW9 1451 aa16.54■□□□□ 0.24
SNX18P5-201ENST00000619873 WDR62O43379 1518 aa16.52■□□□□ 0.24
SNX18P5-201ENST00000619873 CCDC88BA6NC98 1476 aa16.49■□□□□ 0.23
SNX18P5-201ENST00000619873 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
SNX18P5-201ENST00000619873 DNAJC5Q9H3Z4 198 aa16.36■□□□□ 0.21
SNX18P5-201ENST00000619873 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
SNX18P5-201ENST00000619873 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
SNX18P5-201ENST00000619873 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
SNX18P5-201ENST00000619873 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
SNX18P5-201ENST00000619873 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
SNX18P5-201ENST00000619873 EIF4G3O43432 1585 aaKnown RBP16.13■□□□□ 0.17
SNX18P5-201ENST00000619873 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
SNX18P5-201ENST00000619873 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
SNX18P5-201ENST00000619873 POLA1P09884 1462 aaPredicted RBP16.09■□□□□ 0.17
SNX18P5-201ENST00000619873 CUX1P39880 1505 aa16.06■□□□□ 0.16
SNX18P5-201ENST00000619873 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
SNX18P5-201ENST00000619873 WDR97A6NE52 1622 aa16.02■□□□□ 0.16
SNX18P5-201ENST00000619873 CHD1O14646 1710 aa16■□□□□ 0.15
SNX18P5-201ENST00000619873 SOGA1O94964 1423 aa16■□□□□ 0.15
SNX18P5-201ENST00000619873 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
SNX18P5-201ENST00000619873 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
SNX18P5-201ENST00000619873 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNX18P5-201ENST00000619873 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
SNX18P5-201ENST00000619873 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
SNX18P5-201ENST00000619873 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
SNX18P5-201ENST00000619873 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
SNX18P5-201ENST00000619873 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
SNX18P5-201ENST00000619873 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
SNX18P5-201ENST00000619873 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
SNX18P5-201ENST00000619873 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
SNX18P5-201ENST00000619873 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
SNX18P5-201ENST00000619873 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
SNX18P5-201ENST00000619873 MAGI1Q96QZ7 1491 aaPredicted RBP15.86■□□□□ 0.13
SNX18P5-201ENST00000619873 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
SNX18P5-201ENST00000619873 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
SNX18P5-201ENST00000619873 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
SNX18P5-201ENST00000619873 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
SNX18P5-201ENST00000619873 FBLN2P98095 1184 aa15.83■□□□□ 0.12
SNX18P5-201ENST00000619873 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
SNX18P5-201ENST00000619873 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
SNX18P5-201ENST00000619873 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
SNX18P5-201ENST00000619873 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
SNX18P5-201ENST00000619873 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
SNX18P5-201ENST00000619873 ADAMTS12P58397 1594 aa15.74■□□□□ 0.11
SNX18P5-201ENST00000619873 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
SNX18P5-201ENST00000619873 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
SNX18P5-201ENST00000619873 SENP3Q9H4L4 574 aaPredicted RBP15.65■□□□□ 0.1
SNX18P5-201ENST00000619873 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
SNX18P5-201ENST00000619873 ARAP1Q96P48 1450 aa15.64■□□□□ 0.09
SNX18P5-201ENST00000619873 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
SNX18P5-201ENST00000619873 CUL7Q14999 1698 aa15.6■□□□□ 0.09
SNX18P5-201ENST00000619873 NUP160Q12769 1436 aa15.58■□□□□ 0.08
SNX18P5-201ENST00000619873 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
SNX18P5-201ENST00000619873 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
SNX18P5-201ENST00000619873 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
SNX18P5-201ENST00000619873 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms