RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 NISCHQ9Y2I1 1504 aa27.9■■■□□ 2.06
TARDBP-221ENST00000619555 ABCC9O60706 1549 aa25.02■■□□□ 1.6
TARDBP-221ENST00000619555 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
TARDBP-221ENST00000619555 RB1CC1Q8TDY2 1594 aa23.77■■□□□ 1.4
TARDBP-221ENST00000619555 DCAF8L2P0C7V8 631 aa23.62■■□□□ 1.37
TARDBP-221ENST00000619555 NACADO15069 1562 aa23.61■■□□□ 1.37
TARDBP-221ENST00000619555 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
TARDBP-221ENST00000619555 PABPN1Q86U42 306 aaKnown RBP eCLIP23.34■■□□□ 1.33
TARDBP-221ENST00000619555 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
TARDBP-221ENST00000619555 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
TARDBP-221ENST00000619555 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
TARDBP-221ENST00000619555 BICRAQ9NZM4 1560 aa23.1■■□□□ 1.29
TARDBP-221ENST00000619555 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
TARDBP-221ENST00000619555 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
TARDBP-221ENST00000619555 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
TARDBP-221ENST00000619555 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
TARDBP-221ENST00000619555 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
TARDBP-221ENST00000619555 CECR2Q9BXF3 1484 aa22.51■■□□□ 1.19
TARDBP-221ENST00000619555 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
TARDBP-221ENST00000619555 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
TARDBP-221ENST00000619555 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
TARDBP-221ENST00000619555 SMARCA2P51531 1590 aa21.68■■□□□ 1.06
TARDBP-221ENST00000619555 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
TARDBP-221ENST00000619555 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
TARDBP-221ENST00000619555 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
TARDBP-221ENST00000619555 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
TARDBP-221ENST00000619555 MROH2BQ7Z745 1585 aa21.52■■□□□ 1.04
TARDBP-221ENST00000619555 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
TARDBP-221ENST00000619555 NESP48681 1621 aa21.51■■□□□ 1.03
TARDBP-221ENST00000619555 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
TARDBP-221ENST00000619555 CUX2O14529 1486 aa21.49■■□□□ 1.03
TARDBP-221ENST00000619555 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
TARDBP-221ENST00000619555 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
TARDBP-221ENST00000619555 WIZO95785 1651 aa21.25■□□□□ 0.99
TARDBP-221ENST00000619555 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
TARDBP-221ENST00000619555 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
TARDBP-221ENST00000619555 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
TARDBP-221ENST00000619555 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
TARDBP-221ENST00000619555 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
TARDBP-221ENST00000619555 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
TARDBP-221ENST00000619555 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
TARDBP-221ENST00000619555 WDR62O43379 1518 aa20.94■□□□□ 0.94
TARDBP-221ENST00000619555 CFTRP13569 1480 aa20.93■□□□□ 0.94
TARDBP-221ENST00000619555 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
TARDBP-221ENST00000619555 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
TARDBP-221ENST00000619555 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
TARDBP-221ENST00000619555 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
TARDBP-221ENST00000619555 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
TARDBP-221ENST00000619555 TRIM41Q8WV44 630 aa20.6■□□□□ 0.89
TARDBP-221ENST00000619555 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
TARDBP-221ENST00000619555 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
TARDBP-221ENST00000619555 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
TARDBP-221ENST00000619555 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
TARDBP-221ENST00000619555 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
TARDBP-221ENST00000619555 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
TARDBP-221ENST00000619555 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
TARDBP-221ENST00000619555 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
TARDBP-221ENST00000619555 AQRO60306 1485 aaKnown RBP eCLIP20.35■□□□□ 0.855e-11■■□□□ 14.4
TARDBP-221ENST00000619555 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
TARDBP-221ENST00000619555 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
TARDBP-221ENST00000619555 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
TARDBP-221ENST00000619555 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
TARDBP-221ENST00000619555 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
TARDBP-221ENST00000619555 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
TARDBP-221ENST00000619555 SOGA1O94964 1423 aa20.26■□□□□ 0.83
TARDBP-221ENST00000619555 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
TARDBP-221ENST00000619555 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
TARDBP-221ENST00000619555 FBLN2P98095 1184 aa20.22■□□□□ 0.83
TARDBP-221ENST00000619555 CHD1O14646 1710 aa20.22■□□□□ 0.83
TARDBP-221ENST00000619555 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
TARDBP-221ENST00000619555 ARHGEF11O15085 1522 aa20.21■□□□□ 0.83
TARDBP-221ENST00000619555 CUX1P39880 1505 aa20.21■□□□□ 0.83
TARDBP-221ENST00000619555 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
TARDBP-221ENST00000619555 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
TARDBP-221ENST00000619555 WDR97A6NE52 1622 aa20.08■□□□□ 0.8
TARDBP-221ENST00000619555 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
TARDBP-221ENST00000619555 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
TARDBP-221ENST00000619555 MAGI1Q96QZ7 1491 aaPredicted RBP20.03■□□□□ 0.8
TARDBP-221ENST00000619555 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
TARDBP-221ENST00000619555 GAPVD1Q14C86 1478 aa19.99■□□□□ 0.79
TARDBP-221ENST00000619555 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
TARDBP-221ENST00000619555 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
TARDBP-221ENST00000619555 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
TARDBP-221ENST00000619555 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
TARDBP-221ENST00000619555 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
TARDBP-221ENST00000619555 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
TARDBP-221ENST00000619555 WRNQ14191 1432 aaPredicted RBP eCLIP19.9■□□□□ 0.78
TARDBP-221ENST00000619555 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
TARDBP-221ENST00000619555 TOP2BQ02880 1626 aa19.87■□□□□ 0.77
TARDBP-221ENST00000619555 BIVM-ERCC5R4GMW8 1640 aa19.86■□□□□ 0.77
TARDBP-221ENST00000619555 GRIN2AQ12879 1464 aa19.79■□□□□ 0.76
TARDBP-221ENST00000619555 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
TARDBP-221ENST00000619555 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
TARDBP-221ENST00000619555 NUP160Q12769 1436 aa19.73■□□□□ 0.75
TARDBP-221ENST00000619555 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
TARDBP-221ENST00000619555 ERCC6L2Q5T890 1561 aa19.71■□□□□ 0.75
TARDBP-221ENST00000619555 ERICH3Q5RHP9 1530 aa19.71■□□□□ 0.75
TARDBP-221ENST00000619555 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
TARDBP-221ENST00000619555 JPH4Q96JJ6 628 aa19.57■□□□□ 0.72
TARDBP-221ENST00000619555 PRG4Q92954 1404 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms