RNA–Protein interactions for RNA: ENST00000619495.1

AL109954.1-201, humanhuman

TSL 4 BASIC

Gene AL109954.1, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.1-201ENST00000619495 NISCHQ9Y2I1 1504 aa18.48■□□□□ 0.55
AL109954.1-201ENST00000619495 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
AL109954.1-201ENST00000619495 ABCC9O60706 1549 aa16.56■□□□□ 0.24
AL109954.1-201ENST00000619495 AEBP2Q6ZN18 517 aaPredicted RBP16.17■□□□□ 0.18
AL109954.1-201ENST00000619495 CHIC1Q5VXU3 224 aa15.77■□□□□ 0.12
AL109954.1-201ENST00000619495 RB1CC1Q8TDY2 1594 aa15.74■□□□□ 0.11
AL109954.1-201ENST00000619495 NACADO15069 1562 aa15.62■□□□□ 0.09
AL109954.1-201ENST00000619495 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
AL109954.1-201ENST00000619495 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
AL109954.1-201ENST00000619495 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.08
AL109954.1-201ENST00000619495 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
AL109954.1-201ENST00000619495 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
AL109954.1-201ENST00000619495 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
AL109954.1-201ENST00000619495 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
AL109954.1-201ENST00000619495 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
AL109954.1-201ENST00000619495 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
AL109954.1-201ENST00000619495 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
AL109954.1-201ENST00000619495 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
AL109954.1-201ENST00000619495 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
AL109954.1-201ENST00000619495 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
AL109954.1-201ENST00000619495 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
AL109954.1-201ENST00000619495 NCAPD3P42695 1498 aa14.43□□□□□ -0.1
AL109954.1-201ENST00000619495 ATAD2BQ9ULI0 1458 aa14.41□□□□□ -0.1
AL109954.1-201ENST00000619495 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
AL109954.1-201ENST00000619495 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
AL109954.1-201ENST00000619495 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
AL109954.1-201ENST00000619495 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
AL109954.1-201ENST00000619495 NESP48681 1621 aa14.26□□□□□ -0.13
AL109954.1-201ENST00000619495 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
AL109954.1-201ENST00000619495 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
AL109954.1-201ENST00000619495 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
AL109954.1-201ENST00000619495 CUX2O14529 1486 aa14.2□□□□□ -0.14
AL109954.1-201ENST00000619495 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
AL109954.1-201ENST00000619495 WIZO95785 1651 aa14.13□□□□□ -0.15
AL109954.1-201ENST00000619495 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
AL109954.1-201ENST00000619495 THOC2Q8NI27 1593 aaKnown RBP14.11□□□□□ -0.15
AL109954.1-201ENST00000619495 LAMC3Q9Y6N6 1575 aa14.11□□□□□ -0.15
AL109954.1-201ENST00000619495 RSF1Q96T23 1441 aaPredicted RBP14.09□□□□□ -0.15
AL109954.1-201ENST00000619495 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
AL109954.1-201ENST00000619495 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
AL109954.1-201ENST00000619495 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
AL109954.1-201ENST00000619495 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
AL109954.1-201ENST00000619495 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
AL109954.1-201ENST00000619495 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
AL109954.1-201ENST00000619495 WDR62O43379 1518 aa13.88□□□□□ -0.19
AL109954.1-201ENST00000619495 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
AL109954.1-201ENST00000619495 CEP164Q9UPV0 1460 aa13.85□□□□□ -0.19
AL109954.1-201ENST00000619495 CFTRP13569 1480 aa13.84□□□□□ -0.19
AL109954.1-201ENST00000619495 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
AL109954.1-201ENST00000619495 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
AL109954.1-201ENST00000619495 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
AL109954.1-201ENST00000619495 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
AL109954.1-201ENST00000619495 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
AL109954.1-201ENST00000619495 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
AL109954.1-201ENST00000619495 DNMBPQ6XZF7 1577 aa13.55□□□□□ -0.24
AL109954.1-201ENST00000619495 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
AL109954.1-201ENST00000619495 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
AL109954.1-201ENST00000619495 EIF4G3O43432 1585 aaKnown RBP13.53□□□□□ -0.24
AL109954.1-201ENST00000619495 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
AL109954.1-201ENST00000619495 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
AL109954.1-201ENST00000619495 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
AL109954.1-201ENST00000619495 CHD1O14646 1710 aa13.46□□□□□ -0.25
AL109954.1-201ENST00000619495 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.25
AL109954.1-201ENST00000619495 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
AL109954.1-201ENST00000619495 RIMBP3CA6NJZ7 1639 aa13.46□□□□□ -0.26
AL109954.1-201ENST00000619495 RIMBP3BA6NNM3 1639 aa13.46□□□□□ -0.26
AL109954.1-201ENST00000619495 RIMBP3Q9UFD9 1639 aa13.46□□□□□ -0.26
AL109954.1-201ENST00000619495 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
AL109954.1-201ENST00000619495 CUX1P39880 1505 aa13.4□□□□□ -0.26
AL109954.1-201ENST00000619495 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
AL109954.1-201ENST00000619495 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
AL109954.1-201ENST00000619495 SOGA1O94964 1423 aa13.37□□□□□ -0.27
AL109954.1-201ENST00000619495 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
AL109954.1-201ENST00000619495 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
AL109954.1-201ENST00000619495 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
AL109954.1-201ENST00000619495 FBLN2P98095 1184 aa13.31□□□□□ -0.28
AL109954.1-201ENST00000619495 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
AL109954.1-201ENST00000619495 WRNQ14191 1432 aaPredicted RBP eCLIP13.28□□□□□ -0.28
AL109954.1-201ENST00000619495 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
AL109954.1-201ENST00000619495 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
AL109954.1-201ENST00000619495 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
AL109954.1-201ENST00000619495 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
AL109954.1-201ENST00000619495 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
AL109954.1-201ENST00000619495 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
AL109954.1-201ENST00000619495 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
AL109954.1-201ENST00000619495 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
AL109954.1-201ENST00000619495 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
AL109954.1-201ENST00000619495 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
AL109954.1-201ENST00000619495 SYNJ2O15056 1496 aa13.2□□□□□ -0.3
AL109954.1-201ENST00000619495 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
AL109954.1-201ENST00000619495 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
AL109954.1-201ENST00000619495 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
AL109954.1-201ENST00000619495 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
AL109954.1-201ENST00000619495 ERCC6L2Q5T890 1561 aa13.1□□□□□ -0.31
AL109954.1-201ENST00000619495 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
AL109954.1-201ENST00000619495 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
AL109954.1-201ENST00000619495 NUP160Q12769 1436 aa13.05□□□□□ -0.32
AL109954.1-201ENST00000619495 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
AL109954.1-201ENST00000619495 ERICH3Q5RHP9 1530 aa13.04□□□□□ -0.32
AL109954.1-201ENST00000619495 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms