RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 NISCHQ9Y2I1 1504 aa13.62□□□□□ -0.23
CDH11-219ENST00000619158 CCDC180Q9P1Z9 1646 aa12.41□□□□□ -0.42
CDH11-219ENST00000619158 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
CDH11-219ENST00000619158 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
CDH11-219ENST00000619158 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
CDH11-219ENST00000619158 DCAF1Q9Y4B6 1507 aa11.54□□□□□ -0.56
CDH11-219ENST00000619158 ZCCHC6Q5VYS8 1495 aaKnown RBP11.45□□□□□ -0.58
CDH11-219ENST00000619158 NACADO15069 1562 aa11.43□□□□□ -0.58
CDH11-219ENST00000619158 ABCC9O60706 1549 aa11.42□□□□□ -0.58
CDH11-219ENST00000619158 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
CDH11-219ENST00000619158 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
CDH11-219ENST00000619158 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
CDH11-219ENST00000619158 BICRAQ9NZM4 1560 aa11.16□□□□□ -0.62
CDH11-219ENST00000619158 SCRIBQ14160 1630 aa10.89□□□□□ -0.67
CDH11-219ENST00000619158 PHF23Q9BUL5 403 aaPredicted RBP10.75□□□□□ -0.69
CDH11-219ENST00000619158 PEG3Q9GZU2 1588 aa10.72□□□□□ -0.69
CDH11-219ENST00000619158 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.69
CDH11-219ENST00000619158 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
CDH11-219ENST00000619158 SMARCA4P51532 1647 aa10.62□□□□□ -0.71
CDH11-219ENST00000619158 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
CDH11-219ENST00000619158 SMARCA2P51531 1590 aa10.55□□□□□ -0.72
CDH11-219ENST00000619158 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
CDH11-219ENST00000619158 NCAPD3P42695 1498 aa10.47□□□□□ -0.73
CDH11-219ENST00000619158 CECR2Q9BXF3 1484 aa10.44□□□□□ -0.74
CDH11-219ENST00000619158 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
CDH11-219ENST00000619158 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH11-219ENST00000619158 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
CDH11-219ENST00000619158 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
CDH11-219ENST00000619158 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.75
CDH11-219ENST00000619158 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
CDH11-219ENST00000619158 WIZO95785 1651 aa10.36□□□□□ -0.75
CDH11-219ENST00000619158 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
CDH11-219ENST00000619158 RSF1Q96T23 1441 aaPredicted RBP10.27□□□□□ -0.77
CDH11-219ENST00000619158 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
CDH11-219ENST00000619158 BAZ1BQ9UIG0 1483 aaKnown RBP10.22□□□□□ -0.77
CDH11-219ENST00000619158 THOC2Q8NI27 1593 aaKnown RBP10.21□□□□□ -0.77
CDH11-219ENST00000619158 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
CDH11-219ENST00000619158 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
CDH11-219ENST00000619158 SENP3Q9H4L4 574 aaPredicted RBP10.11□□□□□ -0.79
CDH11-219ENST00000619158 CFTRP13569 1480 aa10.1□□□□□ -0.79
CDH11-219ENST00000619158 WDR62O43379 1518 aa10.08□□□□□ -0.8
CDH11-219ENST00000619158 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
CDH11-219ENST00000619158 CUX2O14529 1486 aa10.03□□□□□ -0.8
CDH11-219ENST00000619158 WDR97A6NE52 1622 aa10.02□□□□□ -0.8
CDH11-219ENST00000619158 NESP48681 1621 aa10□□□□□ -0.81
CDH11-219ENST00000619158 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
CDH11-219ENST00000619158 BIVM-ERCC5R4GMW8 1640 aa9.97□□□□□ -0.81
CDH11-219ENST00000619158 MRC2Q9UBG0 1479 aa9.93□□□□□ -0.82
CDH11-219ENST00000619158 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CDH11-219ENST00000619158 DNMBPQ6XZF7 1577 aa9.92□□□□□ -0.82
CDH11-219ENST00000619158 TARBP1Q13395 1621 aaKnown RBP9.92□□□□□ -0.82
CDH11-219ENST00000619158 URB2Q14146 1524 aaKnown RBP9.9□□□□□ -0.82
CDH11-219ENST00000619158 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
CDH11-219ENST00000619158 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
CDH11-219ENST00000619158 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
CDH11-219ENST00000619158 ABCC8Q09428 1581 aa9.85□□□□□ -0.83
CDH11-219ENST00000619158 TOP2BQ02880 1626 aa9.84□□□□□ -0.83
CDH11-219ENST00000619158 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
CDH11-219ENST00000619158 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
CDH11-219ENST00000619158 CUX1P39880 1505 aa9.82□□□□□ -0.84
CDH11-219ENST00000619158 PBRM1Q86U86 1689 aa9.79□□□□□ -0.84
CDH11-219ENST00000619158 EIF4G3O43432 1585 aaKnown RBP9.77□□□□□ -0.85
CDH11-219ENST00000619158 ERCC6Q03468 1493 aa9.77□□□□□ -0.85
CDH11-219ENST00000619158 SYNJ1O43426 1573 aa9.77□□□□□ -0.85
CDH11-219ENST00000619158 IFT140Q96RY7 1462 aa9.74□□□□□ -0.85
CDH11-219ENST00000619158 EHMT2Q96KQ7 1210 aa9.74□□□□□ -0.85
CDH11-219ENST00000619158 POLA1P09884 1462 aaPredicted RBP9.71□□□□□ -0.85
CDH11-219ENST00000619158 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
CDH11-219ENST00000619158 CHD1O14646 1710 aa9.68□□□□□ -0.86
CDH11-219ENST00000619158 ADRA2BP18089 450 aa9.67□□□□□ -0.86
CDH11-219ENST00000619158 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
CDH11-219ENST00000619158 ADAMTS12P58397 1594 aa9.65□□□□□ -0.87
CDH11-219ENST00000619158 CLASP1Q7Z460 1538 aa9.63□□□□□ -0.87
CDH11-219ENST00000619158 SHROOM2Q13796 1616 aa9.63□□□□□ -0.87
CDH11-219ENST00000619158 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
CDH11-219ENST00000619158 CUL7Q14999 1698 aa9.61□□□□□ -0.87
CDH11-219ENST00000619158 ZNF608Q9ULD9 1512 aaPredicted RBP9.6□□□□□ -0.87
CDH11-219ENST00000619158 MAGI1Q96QZ7 1491 aaPredicted RBP9.59□□□□□ -0.87
CDH11-219ENST00000619158 WRNQ14191 1432 aaPredicted RBP eCLIP9.57□□□□□ -0.88
CDH11-219ENST00000619158 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
CDH11-219ENST00000619158 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
CDH11-219ENST00000619158 GRIN2BQ13224 1484 aa9.52□□□□□ -0.89
CDH11-219ENST00000619158 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
CDH11-219ENST00000619158 SOGA1O94964 1423 aa9.5□□□□□ -0.89
CDH11-219ENST00000619158 CTTNBP2Q8WZ74 1663 aa9.49□□□□□ -0.89
CDH11-219ENST00000619158 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
CDH11-219ENST00000619158 PPP6R1Q9UPN7 881 aa9.49□□□□□ -0.89
CDH11-219ENST00000619158 NUP160Q12769 1436 aa9.48□□□□□ -0.89
CDH11-219ENST00000619158 GAPVD1Q14C86 1478 aa9.48□□□□□ -0.89
CDH11-219ENST00000619158 SNAPC4Q5SXM2 1469 aa9.48□□□□□ -0.89
CDH11-219ENST00000619158 KCNA4P22459 653 aa9.47□□□□□ -0.89
CDH11-219ENST00000619158 RIMBP3CA6NJZ7 1639 aa9.45□□□□□ -0.9
CDH11-219ENST00000619158 RIMBP3BA6NNM3 1639 aa9.45□□□□□ -0.9
CDH11-219ENST00000619158 RIMBP3Q9UFD9 1639 aa9.45□□□□□ -0.9
CDH11-219ENST00000619158 GRIN2AQ12879 1464 aa9.43□□□□□ -0.9
CDH11-219ENST00000619158 AQRO60306 1485 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDH11-219ENST00000619158 KIF21BO75037 1637 aa9.43□□□□□ -0.9
CDH11-219ENST00000619158 FHAD1B1AJZ9 1412 aa9.42□□□□□ -0.9
CDH11-219ENST00000619158 FOXD1Q16676 465 aa9.4□□□□□ -0.9
CDH11-219ENST00000619158 PRXQ9BXM0 1461 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms