RNA–Protein interactions for RNA: ENST00000618698.4

CPEB1-217, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2

Gene CPEB1, Length 2,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-217ENST00000618698 NISCHQ9Y2I1 1504 aa21.74■■□□□ 1.07
CPEB1-217ENST00000618698 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
CPEB1-217ENST00000618698 ABCC9O60706 1549 aa18.28■□□□□ 0.52
CPEB1-217ENST00000618698 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
CPEB1-217ENST00000618698 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
CPEB1-217ENST00000618698 MYO15BQ96JP2 1530 aa18.02■□□□□ 0.48
CPEB1-217ENST00000618698 NACADO15069 1562 aa17.94■□□□□ 0.46
CPEB1-217ENST00000618698 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
CPEB1-217ENST00000618698 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
CPEB1-217ENST00000618698 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.39
CPEB1-217ENST00000618698 SCRIBQ14160 1630 aa17.46■□□□□ 0.39
CPEB1-217ENST00000618698 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
CPEB1-217ENST00000618698 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
CPEB1-217ENST00000618698 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
CPEB1-217ENST00000618698 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
CPEB1-217ENST00000618698 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
CPEB1-217ENST00000618698 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
CPEB1-217ENST00000618698 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
CPEB1-217ENST00000618698 MROH2BQ7Z745 1585 aa16.74■□□□□ 0.27
CPEB1-217ENST00000618698 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
CPEB1-217ENST00000618698 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
CPEB1-217ENST00000618698 CC2D2AQ9P2K1 1620 aa16.62■□□□□ 0.25
CPEB1-217ENST00000618698 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
CPEB1-217ENST00000618698 WIZO95785 1651 aa16.59■□□□□ 0.25
CPEB1-217ENST00000618698 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
CPEB1-217ENST00000618698 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
CPEB1-217ENST00000618698 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
CPEB1-217ENST00000618698 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
CPEB1-217ENST00000618698 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
CPEB1-217ENST00000618698 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
CPEB1-217ENST00000618698 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
CPEB1-217ENST00000618698 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
CPEB1-217ENST00000618698 CFTRP13569 1480 aa16.05■□□□□ 0.16
CPEB1-217ENST00000618698 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
CPEB1-217ENST00000618698 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
CPEB1-217ENST00000618698 CADPSQ9ULU8 1353 aa16.03■□□□□ 0.16
CPEB1-217ENST00000618698 NESP48681 1621 aa15.96■□□□□ 0.15
CPEB1-217ENST00000618698 HRCP23327 699 aa15.92■□□□□ 0.14
CPEB1-217ENST00000618698 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
CPEB1-217ENST00000618698 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
CPEB1-217ENST00000618698 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
CPEB1-217ENST00000618698 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
CPEB1-217ENST00000618698 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
CPEB1-217ENST00000618698 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
CPEB1-217ENST00000618698 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.1
CPEB1-217ENST00000618698 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
CPEB1-217ENST00000618698 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
CPEB1-217ENST00000618698 CUX1P39880 1505 aa15.69■□□□□ 0.1
CPEB1-217ENST00000618698 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
CPEB1-217ENST00000618698 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
CPEB1-217ENST00000618698 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
CPEB1-217ENST00000618698 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
CPEB1-217ENST00000618698 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
CPEB1-217ENST00000618698 SYNJ1O43426 1573 aa15.68■□□□□ 0.1
CPEB1-217ENST00000618698 WDR62O43379 1518 aa15.68■□□□□ 0.1
CPEB1-217ENST00000618698 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
CPEB1-217ENST00000618698 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
CPEB1-217ENST00000618698 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.09
CPEB1-217ENST00000618698 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
CPEB1-217ENST00000618698 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
CPEB1-217ENST00000618698 CUX2O14529 1486 aa15.51■□□□□ 0.07
CPEB1-217ENST00000618698 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
CPEB1-217ENST00000618698 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
CPEB1-217ENST00000618698 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
CPEB1-217ENST00000618698 PELP1Q8IZL8 1130 aaKnown RBP15.48■□□□□ 0.07
CPEB1-217ENST00000618698 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
CPEB1-217ENST00000618698 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
CPEB1-217ENST00000618698 SOGA1O94964 1423 aa15.44■□□□□ 0.06
CPEB1-217ENST00000618698 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
CPEB1-217ENST00000618698 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
CPEB1-217ENST00000618698 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.04
CPEB1-217ENST00000618698 EEA1Q15075 1411 aa15.33■□□□□ 0.04
CPEB1-217ENST00000618698 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.04
CPEB1-217ENST00000618698 KIF27Q86VH2 1401 aa15.32■□□□□ 0.04
CPEB1-217ENST00000618698 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
CPEB1-217ENST00000618698 PBRM1Q86U86 1689 aa15.3■□□□□ 0.04
CPEB1-217ENST00000618698 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
CPEB1-217ENST00000618698 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
CPEB1-217ENST00000618698 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
CPEB1-217ENST00000618698 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■□□ 19.1
CPEB1-217ENST00000618698 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
CPEB1-217ENST00000618698 IGF1RP08069 1367 aa15.23■□□□□ 0.03
CPEB1-217ENST00000618698 CUL7Q14999 1698 aa15.23■□□□□ 0.03
CPEB1-217ENST00000618698 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
CPEB1-217ENST00000618698 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
CPEB1-217ENST00000618698 PRXQ9BXM0 1461 aa15.19■□□□□ 0.02
CPEB1-217ENST00000618698 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
CPEB1-217ENST00000618698 KIF21BO75037 1637 aa15.18■□□□□ 0.02
CPEB1-217ENST00000618698 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
CPEB1-217ENST00000618698 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
CPEB1-217ENST00000618698 FHAD1B1AJZ9 1412 aa15.14■□□□□ 0.01
CPEB1-217ENST00000618698 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
CPEB1-217ENST00000618698 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
CPEB1-217ENST00000618698 FAM9AQ8IZU1 332 aaPredicted RBP15.1■□□□□ 0.01
CPEB1-217ENST00000618698 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
CPEB1-217ENST00000618698 CHD1O14646 1710 aa15.08■□□□□ 0
CPEB1-217ENST00000618698 GRIN2AQ12879 1464 aa15.06■□□□□ 0
CPEB1-217ENST00000618698 GOLGA3Q08378 1498 aa15.05■□□□□ 0
CPEB1-217ENST00000618698 NUP160Q12769 1436 aa15.01□□□□□ -0.01
CPEB1-217ENST00000618698 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 437.5 ms