RNA–Protein interactions for RNA: ENST00000617591.4

RDM1-221, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-221ENST00000617591 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
RDM1-221ENST00000617591 CHIC1Q5VXU3 224 aa10.13□□□□□ -0.79
RDM1-221ENST00000617591 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
RDM1-221ENST00000617591 PHF23Q9BUL5 403 aaPredicted RBP8.97□□□□□ -0.97
RDM1-221ENST00000617591 SENP3Q9H4L4 574 aaPredicted RBP8.87□□□□□ -0.99
RDM1-221ENST00000617591 ABCC9O60706 1549 aa8.86□□□□□ -0.99
RDM1-221ENST00000617591 CCDC180Q9P1Z9 1646 aa8.85□□□□□ -0.99
RDM1-221ENST00000617591 RB1CC1Q8TDY2 1594 aa8.48□□□□□ -1.05
RDM1-221ENST00000617591 NACADO15069 1562 aa8.37□□□□□ -1.07
RDM1-221ENST00000617591 DCAF8L2P0C7V8 631 aa8.36□□□□□ -1.07
RDM1-221ENST00000617591 FOXD1Q16676 465 aa8.3□□□□□ -1.08
RDM1-221ENST00000617591 DNAJC5BQ9UF47 199 aa8.22□□□□□ -1.09
RDM1-221ENST00000617591 PABPN1Q86U42 306 aaKnown RBP eCLIP8.21□□□□□ -1.1
RDM1-221ENST00000617591 MYO15BQ96JP2 1530 aa8.19□□□□□ -1.1
RDM1-221ENST00000617591 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
RDM1-221ENST00000617591 PLPPR3Q6T4P5 718 aa8.14□□□□□ -1.11
RDM1-221ENST00000617591 SHROOM4Q9ULL8 1493 aa8.13□□□□□ -1.11
RDM1-221ENST00000617591 BICRAQ9NZM4 1560 aa8.06□□□□□ -1.12
RDM1-221ENST00000617591 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
RDM1-221ENST00000617591 ZCCHC6Q5VYS8 1495 aaKnown RBP8.03□□□□□ -1.12
RDM1-221ENST00000617591 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
RDM1-221ENST00000617591 SCRIBQ14160 1630 aa8.02□□□□□ -1.13
RDM1-221ENST00000617591 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
RDM1-221ENST00000617591 EIF4G1Q04637 1599 aaKnown RBP7.97□□□□□ -1.13
RDM1-221ENST00000617591 PPP6R1Q9UPN7 881 aa7.94□□□□□ -1.14
RDM1-221ENST00000617591 ADRA2BP18089 450 aa7.91□□□□□ -1.14
RDM1-221ENST00000617591 ERCC6Q03468 1493 aa7.78□□□□□ -1.16
RDM1-221ENST00000617591 PIAS4Q8N2W9 510 aaPredicted RBP7.77□□□□□ -1.17
RDM1-221ENST00000617591 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
RDM1-221ENST00000617591 CUX2O14529 1486 aa7.74□□□□□ -1.17
RDM1-221ENST00000617591 SMARCA2P51531 1590 aa7.7□□□□□ -1.18
RDM1-221ENST00000617591 NCAPD3P42695 1498 aa7.66□□□□□ -1.18
RDM1-221ENST00000617591 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
RDM1-221ENST00000617591 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
RDM1-221ENST00000617591 BAZ1BQ9UIG0 1483 aaKnown RBP7.63□□□□□ -1.19
RDM1-221ENST00000617591 SMARCA4P51532 1647 aa7.63□□□□□ -1.19
RDM1-221ENST00000617591 MSH5O43196 834 aa7.62□□□□□ -1.19
RDM1-221ENST00000617591 ATAD2BQ9ULI0 1458 aa7.62□□□□□ -1.19
RDM1-221ENST00000617591 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
RDM1-221ENST00000617591 PDS5BQ9NTI5 1447 aa7.57□□□□□ -1.2
RDM1-221ENST00000617591 NESP48681 1621 aa7.53□□□□□ -1.2
RDM1-221ENST00000617591 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
RDM1-221ENST00000617591 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
RDM1-221ENST00000617591 KIF21AQ7Z4S6 1674 aa7.5□□□□□ -1.21
RDM1-221ENST00000617591 TRIM41Q8WV44 630 aa7.47□□□□□ -1.21
RDM1-221ENST00000617591 MRC2Q9UBG0 1479 aa7.47□□□□□ -1.21
RDM1-221ENST00000617591 CADPSQ9ULU8 1353 aa7.46□□□□□ -1.22
RDM1-221ENST00000617591 CEP164Q9UPV0 1460 aa7.44□□□□□ -1.22
RDM1-221ENST00000617591 MROH2BQ7Z745 1585 aa7.44□□□□□ -1.22
RDM1-221ENST00000617591 WDR62O43379 1518 aa7.42□□□□□ -1.22
RDM1-221ENST00000617591 OSCARQ8IYS5 282 aa7.39□□□□□ -1.23
RDM1-221ENST00000617591 WIZO95785 1651 aa7.38□□□□□ -1.23
RDM1-221ENST00000617591 FANCD2Q9BXW9 1451 aa7.38□□□□□ -1.23
RDM1-221ENST00000617591 PRDM2Q13029 1718 aa7.35□□□□□ -1.23
RDM1-221ENST00000617591 TOP2AP11388 1531 aaKnown RBP7.33□□□□□ -1.24
RDM1-221ENST00000617591 CFTRP13569 1480 aa7.32□□□□□ -1.24
RDM1-221ENST00000617591 ABCC8Q09428 1581 aa7.3□□□□□ -1.24
RDM1-221ENST00000617591 IFT140Q96RY7 1462 aa7.29□□□□□ -1.24
RDM1-221ENST00000617591 URB2Q14146 1524 aaKnown RBP7.27□□□□□ -1.25
RDM1-221ENST00000617591 RSF1Q96T23 1441 aaPredicted RBP7.27□□□□□ -1.25
RDM1-221ENST00000617591 RIMBP3CA6NJZ7 1639 aa7.23□□□□□ -1.25
RDM1-221ENST00000617591 RIMBP3BA6NNM3 1639 aa7.23□□□□□ -1.25
RDM1-221ENST00000617591 RIMBP3Q9UFD9 1639 aa7.23□□□□□ -1.25
RDM1-221ENST00000617591 TRHP20396 242 aaPredicted RBP7.23□□□□□ -1.25
RDM1-221ENST00000617591 FBLN2P98095 1184 aa7.23□□□□□ -1.25
RDM1-221ENST00000617591 DNMBPQ6XZF7 1577 aa7.22□□□□□ -1.25
RDM1-221ENST00000617591 TOPBP1Q92547 1522 aa7.22□□□□□ -1.25
RDM1-221ENST00000617591 EIF4G3O43432 1585 aaKnown RBP7.21□□□□□ -1.25
RDM1-221ENST00000617591 MAPK8IP2Q13387 824 aaPredicted RBP7.21□□□□□ -1.26
RDM1-221ENST00000617591 ARHGEF11O15085 1522 aa7.21□□□□□ -1.26
RDM1-221ENST00000617591 CCDC88BA6NC98 1476 aa7.19□□□□□ -1.26
RDM1-221ENST00000617591 CHD1O14646 1710 aa7.19□□□□□ -1.26
RDM1-221ENST00000617591 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
RDM1-221ENST00000617591 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
RDM1-221ENST00000617591 ZNF608Q9ULD9 1512 aaPredicted RBP7.17□□□□□ -1.26
RDM1-221ENST00000617591 WDR97A6NE52 1622 aa7.17□□□□□ -1.26
RDM1-221ENST00000617591 POTEDQ86YR6 584 aa7.17□□□□□ -1.26
RDM1-221ENST00000617591 CHMP7Q8WUX9 453 aaPredicted RBP7.16□□□□□ -1.26
RDM1-221ENST00000617591 SYNJ1O43426 1573 aa7.16□□□□□ -1.26
RDM1-221ENST00000617591 SOGA1O94964 1423 aa7.13□□□□□ -1.27
RDM1-221ENST00000617591 AQRO60306 1485 aaKnown RBP eCLIP7.12□□□□□ -1.27
RDM1-221ENST00000617591 POLA1P09884 1462 aaPredicted RBP7.12□□□□□ -1.27
RDM1-221ENST00000617591 TARBP1Q13395 1621 aaKnown RBP7.12□□□□□ -1.27
RDM1-221ENST00000617591 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
RDM1-221ENST00000617591 GRIN2BQ13224 1484 aa7.11□□□□□ -1.27
RDM1-221ENST00000617591 SCAF1Q9H7N4 1312 aaKnown RBP7.1□□□□□ -1.27
RDM1-221ENST00000617591 SNAPC4Q5SXM2 1469 aa7.1□□□□□ -1.27
RDM1-221ENST00000617591 TDRD9Q8NDG6 1382 aaKnown RBP7.09□□□□□ -1.27
RDM1-221ENST00000617591 DMRT2Q9Y5R5 561 aa7.09□□□□□ -1.27
RDM1-221ENST00000617591 FGD5Q6ZNL6 1462 aa7.09□□□□□ -1.27
RDM1-221ENST00000617591 ARAP1Q96P48 1450 aa7.09□□□□□ -1.27
RDM1-221ENST00000617591 SYNJ2O15056 1496 aa7.08□□□□□ -1.28
RDM1-221ENST00000617591 PBRM1Q86U86 1689 aa7.07□□□□□ -1.28
RDM1-221ENST00000617591 RAD54L2Q9Y4B4 1467 aa7.07□□□□□ -1.28
RDM1-221ENST00000617591 GAPVD1Q14C86 1478 aa7.04□□□□□ -1.28
RDM1-221ENST00000617591 CLASP1Q7Z460 1538 aa7.04□□□□□ -1.28
RDM1-221ENST00000617591 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
RDM1-221ENST00000617591 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
RDM1-221ENST00000617591 CUX1P39880 1505 aa7.01□□□□□ -1.29
RDM1-221ENST00000617591 ABCA10Q8WWZ4 1543 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms