RNA–Protein interactions for RNA: ENST00000617196.4

SYNJ2BP-COX16-203, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

APPRIS ALT2 TSL 2

Gene SYNJ2BP-COX16, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-203ENST00000617196 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
SYNJ2BP-COX16-203ENST00000617196 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
SYNJ2BP-COX16-203ENST00000617196 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
SYNJ2BP-COX16-203ENST00000617196 ABCC9O60706 1549 aa21.64■■□□□ 1.05
SYNJ2BP-COX16-203ENST00000617196 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
SYNJ2BP-COX16-203ENST00000617196 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
SYNJ2BP-COX16-203ENST00000617196 NACADO15069 1562 aa21.3■■□□□ 1
SYNJ2BP-COX16-203ENST00000617196 RB1CC1Q8TDY2 1594 aa21.15■□□□□ 0.98
SYNJ2BP-COX16-203ENST00000617196 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
SYNJ2BP-COX16-203ENST00000617196 SCRIBQ14160 1630 aa20.72■□□□□ 0.91
SYNJ2BP-COX16-203ENST00000617196 UNC13AQ9UPW8 1703 aa20.63■□□□□ 0.89
SYNJ2BP-COX16-203ENST00000617196 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
SYNJ2BP-COX16-203ENST00000617196 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
SYNJ2BP-COX16-203ENST00000617196 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.85
SYNJ2BP-COX16-203ENST00000617196 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
SYNJ2BP-COX16-203ENST00000617196 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
SYNJ2BP-COX16-203ENST00000617196 CECR2Q9BXF3 1484 aa20.01■□□□□ 0.79
SYNJ2BP-COX16-203ENST00000617196 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
SYNJ2BP-COX16-203ENST00000617196 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
SYNJ2BP-COX16-203ENST00000617196 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
SYNJ2BP-COX16-203ENST00000617196 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
SYNJ2BP-COX16-203ENST00000617196 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
SYNJ2BP-COX16-203ENST00000617196 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
SYNJ2BP-COX16-203ENST00000617196 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
SYNJ2BP-COX16-203ENST00000617196 WIZO95785 1651 aa19.66■□□□□ 0.74
SYNJ2BP-COX16-203ENST00000617196 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
SYNJ2BP-COX16-203ENST00000617196 HMGXB3Q12766 1538 aa19.65■□□□□ 0.74
SYNJ2BP-COX16-203ENST00000617196 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
SYNJ2BP-COX16-203ENST00000617196 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
SYNJ2BP-COX16-203ENST00000617196 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
SYNJ2BP-COX16-203ENST00000617196 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
SYNJ2BP-COX16-203ENST00000617196 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
SYNJ2BP-COX16-203ENST00000617196 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.67
SYNJ2BP-COX16-203ENST00000617196 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
SYNJ2BP-COX16-203ENST00000617196 CFTRP13569 1480 aa19.09■□□□□ 0.65
SYNJ2BP-COX16-203ENST00000617196 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
SYNJ2BP-COX16-203ENST00000617196 LAMC3Q9Y6N6 1575 aa19.03■□□□□ 0.64
SYNJ2BP-COX16-203ENST00000617196 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
SYNJ2BP-COX16-203ENST00000617196 NESP48681 1621 aa18.89■□□□□ 0.62
SYNJ2BP-COX16-203ENST00000617196 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
SYNJ2BP-COX16-203ENST00000617196 FANCD2Q9BXW9 1451 aa18.82■□□□□ 0.6
SYNJ2BP-COX16-203ENST00000617196 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
SYNJ2BP-COX16-203ENST00000617196 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
SYNJ2BP-COX16-203ENST00000617196 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
SYNJ2BP-COX16-203ENST00000617196 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 BIVM-ERCC5R4GMW8 1640 aa18.67■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 CUX1P39880 1505 aa18.64■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.58
SYNJ2BP-COX16-203ENST00000617196 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 THOC2Q8NI27 1593 aaKnown RBP18.61■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 WDR62O43379 1518 aa18.61■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
SYNJ2BP-COX16-203ENST00000617196 FGD5Q6ZNL6 1462 aa18.49■□□□□ 0.55
SYNJ2BP-COX16-203ENST00000617196 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
SYNJ2BP-COX16-203ENST00000617196 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
SYNJ2BP-COX16-203ENST00000617196 CUX2O14529 1486 aa18.39■□□□□ 0.54
SYNJ2BP-COX16-203ENST00000617196 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
SYNJ2BP-COX16-203ENST00000617196 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
SYNJ2BP-COX16-203ENST00000617196 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
SYNJ2BP-COX16-203ENST00000617196 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
SYNJ2BP-COX16-203ENST00000617196 EEA1Q15075 1411 aa18.34■□□□□ 0.53
SYNJ2BP-COX16-203ENST00000617196 SOGA1O94964 1423 aa18.33■□□□□ 0.53
SYNJ2BP-COX16-203ENST00000617196 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
SYNJ2BP-COX16-203ENST00000617196 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-203ENST00000617196 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-203ENST00000617196 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
SYNJ2BP-COX16-203ENST00000617196 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
SYNJ2BP-COX16-203ENST00000617196 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
SYNJ2BP-COX16-203ENST00000617196 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
SYNJ2BP-COX16-203ENST00000617196 ZNF608Q9ULD9 1512 aaPredicted RBP18.18■□□□□ 0.5
SYNJ2BP-COX16-203ENST00000617196 TDRD9Q8NDG6 1382 aaKnown RBP18.14■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 IGF1RP08069 1367 aa18.11■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 CUL7Q14999 1698 aa18.11■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 KIF21BO75037 1637 aa18.1■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
SYNJ2BP-COX16-203ENST00000617196 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
SYNJ2BP-COX16-203ENST00000617196 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
SYNJ2BP-COX16-203ENST00000617196 ADAMTS12P58397 1594 aa18.06■□□□□ 0.48
SYNJ2BP-COX16-203ENST00000617196 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
SYNJ2BP-COX16-203ENST00000617196 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 GOLGA3Q08378 1498 aa18■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 RAPGEF2Q9Y4G8 1499 aa17.99■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
SYNJ2BP-COX16-203ENST00000617196 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
SYNJ2BP-COX16-203ENST00000617196 NUP160Q12769 1436 aa17.85■□□□□ 0.45
SYNJ2BP-COX16-203ENST00000617196 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
SYNJ2BP-COX16-203ENST00000617196 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
SYNJ2BP-COX16-203ENST00000617196 CHD1O14646 1710 aa17.79■□□□□ 0.44
SYNJ2BP-COX16-203ENST00000617196 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
SYNJ2BP-COX16-203ENST00000617196 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.43
SYNJ2BP-COX16-203ENST00000617196 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms