RNA–Protein interactions for RNA: ENST00000616702.1

CCL3L3-202, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 2

Gene CCL3L3, Length 548 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-202ENST00000616702 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
CCL3L3-202ENST00000616702 AEBP2Q6ZN18 517 aaPredicted RBP31.6■■■□□ 2.65
CCL3L3-202ENST00000616702 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
CCL3L3-202ENST00000616702 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
CCL3L3-202ENST00000616702 ABCC9O60706 1549 aa29.53■■■□□ 2.32
CCL3L3-202ENST00000616702 DCAF8L2P0C7V8 631 aa28.23■■■□□ 2.11
CCL3L3-202ENST00000616702 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
CCL3L3-202ENST00000616702 NACADO15069 1562 aa28.06■■■□□ 2.08
CCL3L3-202ENST00000616702 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
CCL3L3-202ENST00000616702 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
CCL3L3-202ENST00000616702 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
CCL3L3-202ENST00000616702 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
CCL3L3-202ENST00000616702 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
CCL3L3-202ENST00000616702 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
CCL3L3-202ENST00000616702 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
CCL3L3-202ENST00000616702 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
CCL3L3-202ENST00000616702 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
CCL3L3-202ENST00000616702 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
CCL3L3-202ENST00000616702 SENP3Q9H4L4 574 aaPredicted RBP26.7■■□□□ 1.86
CCL3L3-202ENST00000616702 EIF4G1Q04637 1599 aaKnown RBP26.65■■□□□ 1.86
CCL3L3-202ENST00000616702 CC2D2AQ9P2K1 1620 aa26.62■■□□□ 1.85
CCL3L3-202ENST00000616702 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
CCL3L3-202ENST00000616702 NCAPD3P42695 1498 aa25.92■■□□□ 1.74
CCL3L3-202ENST00000616702 SMARCA4P51532 1647 aa25.91■■□□□ 1.74
CCL3L3-202ENST00000616702 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
CCL3L3-202ENST00000616702 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
CCL3L3-202ENST00000616702 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
CCL3L3-202ENST00000616702 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
CCL3L3-202ENST00000616702 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
CCL3L3-202ENST00000616702 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
CCL3L3-202ENST00000616702 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
CCL3L3-202ENST00000616702 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
CCL3L3-202ENST00000616702 NESP48681 1621 aa25.43■■□□□ 1.66
CCL3L3-202ENST00000616702 WIZO95785 1651 aa25.39■■□□□ 1.66
CCL3L3-202ENST00000616702 RSF1Q96T23 1441 aaPredicted RBP25.32■■□□□ 1.64
CCL3L3-202ENST00000616702 CUX2O14529 1486 aa25.26■■□□□ 1.63
CCL3L3-202ENST00000616702 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
CCL3L3-202ENST00000616702 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
CCL3L3-202ENST00000616702 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
CCL3L3-202ENST00000616702 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
CCL3L3-202ENST00000616702 KIF21AQ7Z4S6 1674 aa25.03■■□□□ 1.6
CCL3L3-202ENST00000616702 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
CCL3L3-202ENST00000616702 CFTRP13569 1480 aa24.94■■□□□ 1.58
CCL3L3-202ENST00000616702 FOXD1Q16676 465 aa24.93■■□□□ 1.58
CCL3L3-202ENST00000616702 DNAJC5Q9H3Z4 198 aa24.93■■□□□ 1.58
CCL3L3-202ENST00000616702 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
CCL3L3-202ENST00000616702 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.58
CCL3L3-202ENST00000616702 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
CCL3L3-202ENST00000616702 CCDC88BA6NC98 1476 aa24.86■■□□□ 1.57
CCL3L3-202ENST00000616702 WDR62O43379 1518 aa24.79■■□□□ 1.56
CCL3L3-202ENST00000616702 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
CCL3L3-202ENST00000616702 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
CCL3L3-202ENST00000616702 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
CCL3L3-202ENST00000616702 PLPPR3Q6T4P5 718 aa24.48■■□□□ 1.51
CCL3L3-202ENST00000616702 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
CCL3L3-202ENST00000616702 ABCC8Q09428 1581 aa24.42■■□□□ 1.5
CCL3L3-202ENST00000616702 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
CCL3L3-202ENST00000616702 DNMBPQ6XZF7 1577 aa24.35■■□□□ 1.49
CCL3L3-202ENST00000616702 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
CCL3L3-202ENST00000616702 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
CCL3L3-202ENST00000616702 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
CCL3L3-202ENST00000616702 SOGA1O94964 1423 aa24.17■■□□□ 1.46
CCL3L3-202ENST00000616702 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCL3L3-202ENST00000616702 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
CCL3L3-202ENST00000616702 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
CCL3L3-202ENST00000616702 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
CCL3L3-202ENST00000616702 CUX1P39880 1505 aa24.13■■□□□ 1.45
CCL3L3-202ENST00000616702 FGD5Q6ZNL6 1462 aa24.12■■□□□ 1.45
CCL3L3-202ENST00000616702 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
CCL3L3-202ENST00000616702 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
CCL3L3-202ENST00000616702 FBLN2P98095 1184 aa24.04■■□□□ 1.44
CCL3L3-202ENST00000616702 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
CCL3L3-202ENST00000616702 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
CCL3L3-202ENST00000616702 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
CCL3L3-202ENST00000616702 POTEDQ86YR6 584 aa23.89■■□□□ 1.41
CCL3L3-202ENST00000616702 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
CCL3L3-202ENST00000616702 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
CCL3L3-202ENST00000616702 CHD1O14646 1710 aa23.86■■□□□ 1.41
CCL3L3-202ENST00000616702 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
CCL3L3-202ENST00000616702 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
CCL3L3-202ENST00000616702 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
CCL3L3-202ENST00000616702 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
CCL3L3-202ENST00000616702 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
CCL3L3-202ENST00000616702 RIMBP3CA6NJZ7 1639 aa23.79■■□□□ 1.4
CCL3L3-202ENST00000616702 RIMBP3BA6NNM3 1639 aa23.79■■□□□ 1.4
CCL3L3-202ENST00000616702 RIMBP3Q9UFD9 1639 aa23.79■■□□□ 1.4
CCL3L3-202ENST00000616702 ARHGEF11O15085 1522 aa23.78■■□□□ 1.4
CCL3L3-202ENST00000616702 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
CCL3L3-202ENST00000616702 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
CCL3L3-202ENST00000616702 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
CCL3L3-202ENST00000616702 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
CCL3L3-202ENST00000616702 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
CCL3L3-202ENST00000616702 CYB5RLQ6IPT4 315 aa23.71■■□□□ 1.39
CCL3L3-202ENST00000616702 ADRA2BP18089 450 aa23.69■■□□□ 1.38
CCL3L3-202ENST00000616702 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
CCL3L3-202ENST00000616702 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
CCL3L3-202ENST00000616702 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
CCL3L3-202ENST00000616702 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
CCL3L3-202ENST00000616702 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
CCL3L3-202ENST00000616702 ADAMTS12P58397 1594 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms