RNA–Protein interactions for RNA: ENST00000616453.1

CEACAM5-209, Transcript of carcinoembryonic antigen related cell adhesion molecule 5, humanhuman

TSL 5 BASIC

Gene CEACAM5, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM5-209ENST00000616453 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
CEACAM5-209ENST00000616453 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
CEACAM5-209ENST00000616453 CHIC1Q5VXU3 224 aa22.57■■□□□ 1.2
CEACAM5-209ENST00000616453 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
CEACAM5-209ENST00000616453 ABCC9O60706 1549 aa20.6■□□□□ 0.89
CEACAM5-209ENST00000616453 PHF23Q9BUL5 403 aaPredicted RBP19.89■□□□□ 0.77
CEACAM5-209ENST00000616453 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
CEACAM5-209ENST00000616453 NACADO15069 1562 aa19.66■□□□□ 0.74
CEACAM5-209ENST00000616453 SENP3Q9H4L4 574 aaPredicted RBP19.58■□□□□ 0.72
CEACAM5-209ENST00000616453 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
CEACAM5-209ENST00000616453 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
CEACAM5-209ENST00000616453 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
CEACAM5-209ENST00000616453 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
CEACAM5-209ENST00000616453 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
CEACAM5-209ENST00000616453 DNAJC5BQ9UF47 199 aa19.25■□□□□ 0.67
CEACAM5-209ENST00000616453 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
CEACAM5-209ENST00000616453 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
CEACAM5-209ENST00000616453 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
CEACAM5-209ENST00000616453 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
CEACAM5-209ENST00000616453 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
CEACAM5-209ENST00000616453 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
CEACAM5-209ENST00000616453 CECR2Q9BXF3 1484 aa18.56■□□□□ 0.56
CEACAM5-209ENST00000616453 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
CEACAM5-209ENST00000616453 FOXD1Q16676 465 aa18.22■□□□□ 0.51
CEACAM5-209ENST00000616453 NCAPD3P42695 1498 aa18.15■□□□□ 0.5
CEACAM5-209ENST00000616453 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
CEACAM5-209ENST00000616453 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
CEACAM5-209ENST00000616453 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
CEACAM5-209ENST00000616453 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
CEACAM5-209ENST00000616453 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
CEACAM5-209ENST00000616453 PEG3Q9GZU2 1588 aa17.96■□□□□ 0.47
CEACAM5-209ENST00000616453 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
CEACAM5-209ENST00000616453 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
CEACAM5-209ENST00000616453 NESP48681 1621 aa17.76■□□□□ 0.43
CEACAM5-209ENST00000616453 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
CEACAM5-209ENST00000616453 CUX2O14529 1486 aa17.74■□□□□ 0.43
CEACAM5-209ENST00000616453 WIZO95785 1651 aa17.7■□□□□ 0.42
CEACAM5-209ENST00000616453 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
CEACAM5-209ENST00000616453 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
CEACAM5-209ENST00000616453 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
CEACAM5-209ENST00000616453 DNAJC5Q9H3Z4 198 aa17.59■□□□□ 0.41
CEACAM5-209ENST00000616453 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
CEACAM5-209ENST00000616453 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
CEACAM5-209ENST00000616453 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
CEACAM5-209ENST00000616453 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
CEACAM5-209ENST00000616453 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CEACAM5-209ENST00000616453 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
CEACAM5-209ENST00000616453 CFTRP13569 1480 aa17.43■□□□□ 0.38
CEACAM5-209ENST00000616453 MRC2Q9UBG0 1479 aa17.38■□□□□ 0.37
CEACAM5-209ENST00000616453 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
CEACAM5-209ENST00000616453 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
CEACAM5-209ENST00000616453 WDR62O43379 1518 aa17.35■□□□□ 0.37
CEACAM5-209ENST00000616453 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
CEACAM5-209ENST00000616453 PRDM2Q13029 1718 aa17.25■□□□□ 0.35
CEACAM5-209ENST00000616453 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
CEACAM5-209ENST00000616453 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
CEACAM5-209ENST00000616453 ABCC8Q09428 1581 aa17.07■□□□□ 0.32
CEACAM5-209ENST00000616453 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
CEACAM5-209ENST00000616453 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
CEACAM5-209ENST00000616453 DNMBPQ6XZF7 1577 aa17■□□□□ 0.31
CEACAM5-209ENST00000616453 OSCARQ8IYS5 282 aa16.98■□□□□ 0.31
CEACAM5-209ENST00000616453 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
CEACAM5-209ENST00000616453 SUPT5HO00267 1087 aaKnown RBP16.91■□□□□ 0.3
CEACAM5-209ENST00000616453 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
CEACAM5-209ENST00000616453 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
CEACAM5-209ENST00000616453 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
CEACAM5-209ENST00000616453 SOGA1O94964 1423 aa16.84■□□□□ 0.29
CEACAM5-209ENST00000616453 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
CEACAM5-209ENST00000616453 CUX1P39880 1505 aa16.8■□□□□ 0.28
CEACAM5-209ENST00000616453 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
CEACAM5-209ENST00000616453 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
CEACAM5-209ENST00000616453 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
CEACAM5-209ENST00000616453 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
CEACAM5-209ENST00000616453 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
CEACAM5-209ENST00000616453 MSH5O43196 834 aa16.74■□□□□ 0.27
CEACAM5-209ENST00000616453 CHD1O14646 1710 aa16.71■□□□□ 0.27
CEACAM5-209ENST00000616453 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
CEACAM5-209ENST00000616453 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
CEACAM5-209ENST00000616453 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
CEACAM5-209ENST00000616453 FBLN2P98095 1184 aa16.67■□□□□ 0.26
CEACAM5-209ENST00000616453 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
CEACAM5-209ENST00000616453 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
CEACAM5-209ENST00000616453 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
CEACAM5-209ENST00000616453 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
CEACAM5-209ENST00000616453 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
CEACAM5-209ENST00000616453 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
CEACAM5-209ENST00000616453 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
CEACAM5-209ENST00000616453 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
CEACAM5-209ENST00000616453 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
CEACAM5-209ENST00000616453 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
CEACAM5-209ENST00000616453 ABCA5Q8WWZ7 1642 aa16.59■□□□□ 0.25
CEACAM5-209ENST00000616453 SYNJ2O15056 1496 aa16.58■□□□□ 0.24
CEACAM5-209ENST00000616453 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
CEACAM5-209ENST00000616453 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
CEACAM5-209ENST00000616453 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
CEACAM5-209ENST00000616453 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
CEACAM5-209ENST00000616453 ARAP1Q96P48 1450 aa16.49■□□□□ 0.23
CEACAM5-209ENST00000616453 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
CEACAM5-209ENST00000616453 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
CEACAM5-209ENST00000616453 FHAD1B1AJZ9 1412 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms