RNA–Protein interactions for RNA: ENST00000616246.4

POLR3A-205, Transcript of RNA polymerase III subunit A, humanhuman

TSL 1 (best) BASIC

Gene POLR3A, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3A-205ENST00000616246 NISCHQ9Y2I1 1504 aa26.37■■□□□ 1.81
POLR3A-205ENST00000616246 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
POLR3A-205ENST00000616246 ABCC9O60706 1549 aa22.91■■□□□ 1.26
POLR3A-205ENST00000616246 RB1CC1Q8TDY2 1594 aa22■■□□□ 1.11
POLR3A-205ENST00000616246 NACADO15069 1562 aa21.99■■□□□ 1.11
POLR3A-205ENST00000616246 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
POLR3A-205ENST00000616246 DCAF8L2P0C7V8 631 aa21.9■■□□□ 1.1
POLR3A-205ENST00000616246 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
POLR3A-205ENST00000616246 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
POLR3A-205ENST00000616246 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
POLR3A-205ENST00000616246 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
POLR3A-205ENST00000616246 SCRIBQ14160 1630 aa21.4■■□□□ 1.02
POLR3A-205ENST00000616246 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
POLR3A-205ENST00000616246 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
POLR3A-205ENST00000616246 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
POLR3A-205ENST00000616246 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.93
POLR3A-205ENST00000616246 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
POLR3A-205ENST00000616246 CECR2Q9BXF3 1484 aa20.59■□□□□ 0.89
POLR3A-205ENST00000616246 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
POLR3A-205ENST00000616246 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
POLR3A-205ENST00000616246 MROH2BQ7Z745 1585 aa20.36■□□□□ 0.85
POLR3A-205ENST00000616246 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
POLR3A-205ENST00000616246 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
POLR3A-205ENST00000616246 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
POLR3A-205ENST00000616246 SMARCA2P51531 1590 aa20.27■□□□□ 0.83
POLR3A-205ENST00000616246 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
POLR3A-205ENST00000616246 WIZO95785 1651 aa20.16■□□□□ 0.82
POLR3A-205ENST00000616246 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
POLR3A-205ENST00000616246 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
POLR3A-205ENST00000616246 NESP48681 1621 aa19.88■□□□□ 0.77
POLR3A-205ENST00000616246 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
POLR3A-205ENST00000616246 LAMC3Q9Y6N6 1575 aa19.77■□□□□ 0.76
POLR3A-205ENST00000616246 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
POLR3A-205ENST00000616246 KIF21AQ7Z4S6 1674 aa19.67■□□□□ 0.74
POLR3A-205ENST00000616246 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
POLR3A-205ENST00000616246 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
POLR3A-205ENST00000616246 CFTRP13569 1480 aa19.61■□□□□ 0.73
POLR3A-205ENST00000616246 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
POLR3A-205ENST00000616246 PDS5BQ9NTI5 1447 aa19.57■□□□□ 0.72
POLR3A-205ENST00000616246 PRDM2Q13029 1718 aa19.53■□□□□ 0.72
POLR3A-205ENST00000616246 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
POLR3A-205ENST00000616246 CUX2O14529 1486 aa19.49■□□□□ 0.71
POLR3A-205ENST00000616246 FANCD2Q9BXW9 1451 aa19.48■□□□□ 0.71
POLR3A-205ENST00000616246 CEP164Q9UPV0 1460 aa19.43■□□□□ 0.7
POLR3A-205ENST00000616246 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
POLR3A-205ENST00000616246 WDR62O43379 1518 aa19.39■□□□□ 0.69
POLR3A-205ENST00000616246 URB2Q14146 1524 aaKnown RBP19.34■□□□□ 0.69
POLR3A-205ENST00000616246 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
POLR3A-205ENST00000616246 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
POLR3A-205ENST00000616246 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
POLR3A-205ENST00000616246 CUX1P39880 1505 aa19.09■□□□□ 0.65
POLR3A-205ENST00000616246 POLA1P09884 1462 aaPredicted RBP19.04■□□□□ 0.64
POLR3A-205ENST00000616246 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
POLR3A-205ENST00000616246 ZNF608Q9ULD9 1512 aaPredicted RBP19.02■□□□□ 0.64
POLR3A-205ENST00000616246 IFT140Q96RY7 1462 aa19.02■□□□□ 0.63
POLR3A-205ENST00000616246 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
POLR3A-205ENST00000616246 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
POLR3A-205ENST00000616246 SYNJ1O43426 1573 aa18.94■□□□□ 0.62
POLR3A-205ENST00000616246 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
POLR3A-205ENST00000616246 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
POLR3A-205ENST00000616246 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
POLR3A-205ENST00000616246 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
POLR3A-205ENST00000616246 SOGA1O94964 1423 aa18.91■□□□□ 0.62
POLR3A-205ENST00000616246 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
POLR3A-205ENST00000616246 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
POLR3A-205ENST00000616246 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.612e-7■■■■■ 36.8
POLR3A-205ENST00000616246 TDRD9Q8NDG6 1382 aaKnown RBP18.82■□□□□ 0.6
POLR3A-205ENST00000616246 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
POLR3A-205ENST00000616246 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.59
POLR3A-205ENST00000616246 PBRM1Q86U86 1689 aa18.74■□□□□ 0.59
POLR3A-205ENST00000616246 CHD1O14646 1710 aa18.73■□□□□ 0.59
POLR3A-205ENST00000616246 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
POLR3A-205ENST00000616246 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
POLR3A-205ENST00000616246 GRIN2BQ13224 1484 aa18.68■□□□□ 0.58
POLR3A-205ENST00000616246 OSCARQ8IYS5 282 aa18.63■□□□□ 0.57
POLR3A-205ENST00000616246 MAGI1Q96QZ7 1491 aaPredicted RBP18.63■□□□□ 0.57
POLR3A-205ENST00000616246 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
POLR3A-205ENST00000616246 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
POLR3A-205ENST00000616246 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
POLR3A-205ENST00000616246 FBLN2P98095 1184 aa18.55■□□□□ 0.56
POLR3A-205ENST00000616246 CLASP1Q7Z460 1538 aa18.5■□□□□ 0.55
POLR3A-205ENST00000616246 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
POLR3A-205ENST00000616246 GRIN2AQ12879 1464 aa18.47■□□□□ 0.55
POLR3A-205ENST00000616246 FHAD1B1AJZ9 1412 aa18.46■□□□□ 0.55
POLR3A-205ENST00000616246 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
POLR3A-205ENST00000616246 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
POLR3A-205ENST00000616246 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
POLR3A-205ENST00000616246 KIF27Q86VH2 1401 aa18.46■□□□□ 0.55
POLR3A-205ENST00000616246 IGF1RP08069 1367 aa18.45■□□□□ 0.54
POLR3A-205ENST00000616246 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
POLR3A-205ENST00000616246 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
POLR3A-205ENST00000616246 ARHGEF11O15085 1522 aa18.43■□□□□ 0.54
POLR3A-205ENST00000616246 NUP160Q12769 1436 aa18.41■□□□□ 0.54
POLR3A-205ENST00000616246 CUL7Q14999 1698 aa18.39■□□□□ 0.53
POLR3A-205ENST00000616246 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
POLR3A-205ENST00000616246 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
POLR3A-205ENST00000616246 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
POLR3A-205ENST00000616246 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
POLR3A-205ENST00000616246 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
POLR3A-205ENST00000616246 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms