RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
LINC00649-217ENST00000616030 CCDC180Q9P1Z9 1646 aa23.16■■□□□ 1.3
LINC00649-217ENST00000616030 ABCC9O60706 1549 aa22.61■■□□□ 1.21
LINC00649-217ENST00000616030 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
LINC00649-217ENST00000616030 NACADO15069 1562 aa21.78■■□□□ 1.08
LINC00649-217ENST00000616030 MYO15BQ96JP2 1530 aa21.7■■□□□ 1.07
LINC00649-217ENST00000616030 ZCCHC6Q5VYS8 1495 aaKnown RBP21.55■■□□□ 1.04
LINC00649-217ENST00000616030 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
LINC00649-217ENST00000616030 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
LINC00649-217ENST00000616030 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
LINC00649-217ENST00000616030 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
LINC00649-217ENST00000616030 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
LINC00649-217ENST00000616030 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
LINC00649-217ENST00000616030 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
LINC00649-217ENST00000616030 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
LINC00649-217ENST00000616030 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
LINC00649-217ENST00000616030 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
LINC00649-217ENST00000616030 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
LINC00649-217ENST00000616030 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
LINC00649-217ENST00000616030 NCAPD3P42695 1498 aa20.08■□□□□ 0.81
LINC00649-217ENST00000616030 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
LINC00649-217ENST00000616030 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
LINC00649-217ENST00000616030 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
LINC00649-217ENST00000616030 SMARCA2P51531 1590 aa20.02■□□□□ 0.8
LINC00649-217ENST00000616030 HMGXB3Q12766 1538 aa20.02■□□□□ 0.79
LINC00649-217ENST00000616030 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
LINC00649-217ENST00000616030 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
LINC00649-217ENST00000616030 WIZO95785 1651 aa19.65■□□□□ 0.74
LINC00649-217ENST00000616030 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
LINC00649-217ENST00000616030 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
LINC00649-217ENST00000616030 NESP48681 1621 aa19.54■□□□□ 0.72
LINC00649-217ENST00000616030 CUX2O14529 1486 aa19.51■□□□□ 0.71
LINC00649-217ENST00000616030 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
LINC00649-217ENST00000616030 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
LINC00649-217ENST00000616030 CADPSQ9ULU8 1353 aa19.42■□□□□ 0.7
LINC00649-217ENST00000616030 THOC2Q8NI27 1593 aaKnown RBP19.41■□□□□ 0.7
LINC00649-217ENST00000616030 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
LINC00649-217ENST00000616030 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
LINC00649-217ENST00000616030 CFTRP13569 1480 aa19.33■□□□□ 0.68
LINC00649-217ENST00000616030 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
LINC00649-217ENST00000616030 WDR62O43379 1518 aa19.22■□□□□ 0.67
LINC00649-217ENST00000616030 MRC2Q9UBG0 1479 aa19.22■□□□□ 0.67
LINC00649-217ENST00000616030 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
LINC00649-217ENST00000616030 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
LINC00649-217ENST00000616030 FANCD2Q9BXW9 1451 aa19.19■□□□□ 0.66
LINC00649-217ENST00000616030 AEBP2Q6ZN18 517 aaPredicted RBP19.07■□□□□ 0.64
LINC00649-217ENST00000616030 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
LINC00649-217ENST00000616030 DNAJC5Q9H3Z4 198 aa18.99■□□□□ 0.63
LINC00649-217ENST00000616030 ABCC8Q09428 1581 aa18.91■□□□□ 0.62
LINC00649-217ENST00000616030 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
LINC00649-217ENST00000616030 DNMBPQ6XZF7 1577 aa18.88■□□□□ 0.61
LINC00649-217ENST00000616030 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
LINC00649-217ENST00000616030 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
LINC00649-217ENST00000616030 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
LINC00649-217ENST00000616030 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
LINC00649-217ENST00000616030 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
LINC00649-217ENST00000616030 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
LINC00649-217ENST00000616030 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
LINC00649-217ENST00000616030 WDR97A6NE52 1622 aa18.68■□□□□ 0.58
LINC00649-217ENST00000616030 CUX1P39880 1505 aa18.68■□□□□ 0.58
LINC00649-217ENST00000616030 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
LINC00649-217ENST00000616030 SOGA1O94964 1423 aa18.57■□□□□ 0.56
LINC00649-217ENST00000616030 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
LINC00649-217ENST00000616030 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
LINC00649-217ENST00000616030 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.56
LINC00649-217ENST00000616030 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
LINC00649-217ENST00000616030 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
LINC00649-217ENST00000616030 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
LINC00649-217ENST00000616030 ABCA5Q8WWZ7 1642 aa18.46■□□□□ 0.55
LINC00649-217ENST00000616030 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
LINC00649-217ENST00000616030 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
LINC00649-217ENST00000616030 CHD1O14646 1710 aa18.45■□□□□ 0.54
LINC00649-217ENST00000616030 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
LINC00649-217ENST00000616030 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
LINC00649-217ENST00000616030 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
LINC00649-217ENST00000616030 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
LINC00649-217ENST00000616030 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
LINC00649-217ENST00000616030 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
LINC00649-217ENST00000616030 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
LINC00649-217ENST00000616030 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
LINC00649-217ENST00000616030 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
LINC00649-217ENST00000616030 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
LINC00649-217ENST00000616030 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
LINC00649-217ENST00000616030 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
LINC00649-217ENST00000616030 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
LINC00649-217ENST00000616030 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
LINC00649-217ENST00000616030 GRIN2AQ12879 1464 aa18.2■□□□□ 0.5
LINC00649-217ENST00000616030 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
LINC00649-217ENST00000616030 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
LINC00649-217ENST00000616030 FBLN2P98095 1184 aa18.18■□□□□ 0.5
LINC00649-217ENST00000616030 NUP160Q12769 1436 aa18.17■□□□□ 0.5
LINC00649-217ENST00000616030 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
LINC00649-217ENST00000616030 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
LINC00649-217ENST00000616030 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
LINC00649-217ENST00000616030 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
LINC00649-217ENST00000616030 KIF27Q86VH2 1401 aa18.08■□□□□ 0.49
LINC00649-217ENST00000616030 CUL7Q14999 1698 aa18.08■□□□□ 0.48
LINC00649-217ENST00000616030 IGF1RP08069 1367 aa18.03■□□□□ 0.48
LINC00649-217ENST00000616030 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.47
LINC00649-217ENST00000616030 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms