RNA–Protein interactions for RNA: ENST00000615899.1

HSPA4-204, Transcript of heat shock protein family A (Hsp70) member 4, humanhuman

TSL 5 BASIC

Gene HSPA4, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA4-204ENST00000615899 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
HSPA4-204ENST00000615899 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
HSPA4-204ENST00000615899 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
HSPA4-204ENST00000615899 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
HSPA4-204ENST00000615899 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
HSPA4-204ENST00000615899 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
HSPA4-204ENST00000615899 ABCC9O60706 1549 aa23.57■■□□□ 1.36
HSPA4-204ENST00000615899 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
HSPA4-204ENST00000615899 NACADO15069 1562 aa23.26■■□□□ 1.31
HSPA4-204ENST00000615899 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
HSPA4-204ENST00000615899 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
HSPA4-204ENST00000615899 RB1CC1Q8TDY2 1594 aa23.02■■□□□ 1.28
HSPA4-204ENST00000615899 UNC13AQ9UPW8 1703 aa22.63■■□□□ 1.21
HSPA4-204ENST00000615899 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
HSPA4-204ENST00000615899 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
HSPA4-204ENST00000615899 MROH2BQ7Z745 1585 aa22.43■■□□□ 1.18
HSPA4-204ENST00000615899 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
HSPA4-204ENST00000615899 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.16
HSPA4-204ENST00000615899 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
HSPA4-204ENST00000615899 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
HSPA4-204ENST00000615899 WIZO95785 1651 aa22.28■■□□□ 1.16
HSPA4-204ENST00000615899 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
HSPA4-204ENST00000615899 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
HSPA4-204ENST00000615899 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
HSPA4-204ENST00000615899 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
HSPA4-204ENST00000615899 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
HSPA4-204ENST00000615899 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.07
HSPA4-204ENST00000615899 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
HSPA4-204ENST00000615899 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
HSPA4-204ENST00000615899 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
HSPA4-204ENST00000615899 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
HSPA4-204ENST00000615899 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
HSPA4-204ENST00000615899 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
HSPA4-204ENST00000615899 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
HSPA4-204ENST00000615899 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.03
HSPA4-204ENST00000615899 CC2D2AQ9P2K1 1620 aa21.29■■□□□ 1
HSPA4-204ENST00000615899 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
HSPA4-204ENST00000615899 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
HSPA4-204ENST00000615899 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
HSPA4-204ENST00000615899 SOGA1O94964 1423 aa21.15■□□□□ 0.98
HSPA4-204ENST00000615899 CFTRP13569 1480 aa21.12■□□□□ 0.97
HSPA4-204ENST00000615899 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
HSPA4-204ENST00000615899 EEA1Q15075 1411 aa21.04■□□□□ 0.96
HSPA4-204ENST00000615899 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
HSPA4-204ENST00000615899 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
HSPA4-204ENST00000615899 BIVM-ERCC5R4GMW8 1640 aa21■□□□□ 0.95
HSPA4-204ENST00000615899 CADPSQ9ULU8 1353 aa20.98■□□□□ 0.95
HSPA4-204ENST00000615899 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
HSPA4-204ENST00000615899 CUX1P39880 1505 aa20.95■□□□□ 0.94
HSPA4-204ENST00000615899 PCGF6Q9BYE7 350 aa20.88■□□□□ 0.93
HSPA4-204ENST00000615899 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
HSPA4-204ENST00000615899 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
HSPA4-204ENST00000615899 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
HSPA4-204ENST00000615899 KIF21BO75037 1637 aa20.79■□□□□ 0.92
HSPA4-204ENST00000615899 NESP48681 1621 aa20.79■□□□□ 0.92
HSPA4-204ENST00000615899 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
HSPA4-204ENST00000615899 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
HSPA4-204ENST00000615899 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
HSPA4-204ENST00000615899 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
HSPA4-204ENST00000615899 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
HSPA4-204ENST00000615899 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
HSPA4-204ENST00000615899 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
HSPA4-204ENST00000615899 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
HSPA4-204ENST00000615899 FGD5Q6ZNL6 1462 aa20.67■□□□□ 0.9
HSPA4-204ENST00000615899 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
HSPA4-204ENST00000615899 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
HSPA4-204ENST00000615899 CUX2O14529 1486 aa20.61■□□□□ 0.89
HSPA4-204ENST00000615899 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
HSPA4-204ENST00000615899 TOPBP1Q92547 1522 aa20.59■□□□□ 0.89
HSPA4-204ENST00000615899 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
HSPA4-204ENST00000615899 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
HSPA4-204ENST00000615899 CLIP1P30622 1438 aa20.53■□□□□ 0.88
HSPA4-204ENST00000615899 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
HSPA4-204ENST00000615899 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.88
HSPA4-204ENST00000615899 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
HSPA4-204ENST00000615899 RAD54L2Q9Y4B4 1467 aa20.5■□□□□ 0.87
HSPA4-204ENST00000615899 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
HSPA4-204ENST00000615899 IGF1RP08069 1367 aa20.48■□□□□ 0.87
HSPA4-204ENST00000615899 HRCP23327 699 aa20.46■□□□□ 0.87
HSPA4-204ENST00000615899 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
HSPA4-204ENST00000615899 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
HSPA4-204ENST00000615899 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
HSPA4-204ENST00000615899 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
HSPA4-204ENST00000615899 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
HSPA4-204ENST00000615899 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
HSPA4-204ENST00000615899 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
HSPA4-204ENST00000615899 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.84
HSPA4-204ENST00000615899 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
HSPA4-204ENST00000615899 CUL7Q14999 1698 aa20.26■□□□□ 0.83
HSPA4-204ENST00000615899 TARBP1Q13395 1621 aaKnown RBP20.25■□□□□ 0.83
HSPA4-204ENST00000615899 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
HSPA4-204ENST00000615899 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
HSPA4-204ENST00000615899 APLP2Q06481 763 aa20.2■□□□□ 0.82
HSPA4-204ENST00000615899 WDR62O43379 1518 aa20.16■□□□□ 0.82
HSPA4-204ENST00000615899 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
HSPA4-204ENST00000615899 CTTNBP2Q8WZ74 1663 aa20.11■□□□□ 0.81
HSPA4-204ENST00000615899 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
HSPA4-204ENST00000615899 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■■■ 27.8
HSPA4-204ENST00000615899 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
HSPA4-204ENST00000615899 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms