RNA–Protein interactions for RNA: ENST00000615695.1

DDB2-210, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-210ENST00000615695 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
DDB2-210ENST00000615695 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
DDB2-210ENST00000615695 ABCC9O60706 1549 aa22.68■■□□□ 1.22
DDB2-210ENST00000615695 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
DDB2-210ENST00000615695 NACADO15069 1562 aa21.35■■□□□ 1.01
DDB2-210ENST00000615695 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
DDB2-210ENST00000615695 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
DDB2-210ENST00000615695 DCAF8L2P0C7V8 631 aa21.1■□□□□ 0.97
DDB2-210ENST00000615695 PABPN1Q86U42 306 aaKnown RBP eCLIP21.01■□□□□ 0.95
DDB2-210ENST00000615695 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
DDB2-210ENST00000615695 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
DDB2-210ENST00000615695 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
DDB2-210ENST00000615695 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
DDB2-210ENST00000615695 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
DDB2-210ENST00000615695 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
DDB2-210ENST00000615695 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
DDB2-210ENST00000615695 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
DDB2-210ENST00000615695 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
DDB2-210ENST00000615695 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
DDB2-210ENST00000615695 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
DDB2-210ENST00000615695 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
DDB2-210ENST00000615695 HMGXB3Q12766 1538 aa19.6■□□□□ 0.73
DDB2-210ENST00000615695 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
DDB2-210ENST00000615695 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
DDB2-210ENST00000615695 CUX2O14529 1486 aa19.54■□□□□ 0.72
DDB2-210ENST00000615695 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
DDB2-210ENST00000615695 BAZ1AQ9NRL2 1556 aaPredicted RBP19.5■□□□□ 0.71
DDB2-210ENST00000615695 NESP48681 1621 aa19.48■□□□□ 0.71
DDB2-210ENST00000615695 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
DDB2-210ENST00000615695 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
DDB2-210ENST00000615695 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
DDB2-210ENST00000615695 KIF21AQ7Z4S6 1674 aa19.39■□□□□ 0.69
DDB2-210ENST00000615695 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
DDB2-210ENST00000615695 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
DDB2-210ENST00000615695 WIZO95785 1651 aa19.21■□□□□ 0.67
DDB2-210ENST00000615695 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
DDB2-210ENST00000615695 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
DDB2-210ENST00000615695 WDR62O43379 1518 aa19.02■□□□□ 0.64
DDB2-210ENST00000615695 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
DDB2-210ENST00000615695 MRC2Q9UBG0 1479 aa19.02■□□□□ 0.63
DDB2-210ENST00000615695 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
DDB2-210ENST00000615695 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
DDB2-210ENST00000615695 CEP164Q9UPV0 1460 aa18.94■□□□□ 0.62
DDB2-210ENST00000615695 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
DDB2-210ENST00000615695 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
DDB2-210ENST00000615695 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
DDB2-210ENST00000615695 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
DDB2-210ENST00000615695 CFTRP13569 1480 aa18.83■□□□□ 0.6
DDB2-210ENST00000615695 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
DDB2-210ENST00000615695 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
DDB2-210ENST00000615695 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
DDB2-210ENST00000615695 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
DDB2-210ENST00000615695 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
DDB2-210ENST00000615695 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
DDB2-210ENST00000615695 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
DDB2-210ENST00000615695 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
DDB2-210ENST00000615695 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
DDB2-210ENST00000615695 IFT140Q96RY7 1462 aa18.52■□□□□ 0.55
DDB2-210ENST00000615695 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
DDB2-210ENST00000615695 CHD1O14646 1710 aa18.51■□□□□ 0.55
DDB2-210ENST00000615695 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
DDB2-210ENST00000615695 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
DDB2-210ENST00000615695 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
DDB2-210ENST00000615695 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
DDB2-210ENST00000615695 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
DDB2-210ENST00000615695 AQRO60306 1485 aaKnown RBP eCLIP18.33■□□□□ 0.523e-7■■■■■ 36.6
DDB2-210ENST00000615695 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
DDB2-210ENST00000615695 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
DDB2-210ENST00000615695 FGD5Q6ZNL6 1462 aa18.23■□□□□ 0.51
DDB2-210ENST00000615695 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
DDB2-210ENST00000615695 CUX1P39880 1505 aa18.21■□□□□ 0.51
DDB2-210ENST00000615695 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
DDB2-210ENST00000615695 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
DDB2-210ENST00000615695 SOGA1O94964 1423 aa18.17■□□□□ 0.5
DDB2-210ENST00000615695 FBLN2P98095 1184 aa18.17■□□□□ 0.5
DDB2-210ENST00000615695 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
DDB2-210ENST00000615695 CLASP1Q7Z460 1538 aa18.15■□□□□ 0.5
DDB2-210ENST00000615695 CYB5RLQ6IPT4 315 aa18.13■□□□□ 0.49
DDB2-210ENST00000615695 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
DDB2-210ENST00000615695 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
DDB2-210ENST00000615695 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
DDB2-210ENST00000615695 GRIN2BQ13224 1484 aa18.07■□□□□ 0.48
DDB2-210ENST00000615695 SYNJ2O15056 1496 aa18.03■□□□□ 0.48
DDB2-210ENST00000615695 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
DDB2-210ENST00000615695 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
DDB2-210ENST00000615695 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
DDB2-210ENST00000615695 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
DDB2-210ENST00000615695 BIVM-ERCC5R4GMW8 1640 aa17.97■□□□□ 0.47
DDB2-210ENST00000615695 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
DDB2-210ENST00000615695 TOP2BQ02880 1626 aa17.91■□□□□ 0.46
DDB2-210ENST00000615695 ERCC6L2Q5T890 1561 aa17.9■□□□□ 0.46
DDB2-210ENST00000615695 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
DDB2-210ENST00000615695 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
DDB2-210ENST00000615695 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
DDB2-210ENST00000615695 SHROOM2Q13796 1616 aa17.83■□□□□ 0.44
DDB2-210ENST00000615695 NUP160Q12769 1436 aa17.79■□□□□ 0.44
DDB2-210ENST00000615695 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.43
DDB2-210ENST00000615695 KIF13AQ9H1H9 1805 aa17.76■□□□□ 0.43
DDB2-210ENST00000615695 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
DDB2-210ENST00000615695 RUSC2Q8N2Y8 1516 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms