RNA–Protein interactions for RNA: ENST00000615020.1

AP003027.1-201, humanhuman

Gene AP003027.1, Length 2,080 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003027.1-201ENST00000615020 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
AP003027.1-201ENST00000615020 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
AP003027.1-201ENST00000615020 ABCC9O60706 1549 aa20.03■□□□□ 0.8
AP003027.1-201ENST00000615020 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
AP003027.1-201ENST00000615020 NACADO15069 1562 aa18.94■□□□□ 0.62
AP003027.1-201ENST00000615020 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
AP003027.1-201ENST00000615020 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
AP003027.1-201ENST00000615020 UNC13AQ9UPW8 1703 aa18.75■□□□□ 0.59
AP003027.1-201ENST00000615020 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
AP003027.1-201ENST00000615020 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
AP003027.1-201ENST00000615020 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
AP003027.1-201ENST00000615020 ZCCHC6Q5VYS8 1495 aaKnown RBP18.64■□□□□ 0.57
AP003027.1-201ENST00000615020 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
AP003027.1-201ENST00000615020 DCAF1Q9Y4B6 1507 aa18.49■□□□□ 0.55
AP003027.1-201ENST00000615020 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
AP003027.1-201ENST00000615020 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
AP003027.1-201ENST00000615020 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
AP003027.1-201ENST00000615020 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
AP003027.1-201ENST00000615020 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
AP003027.1-201ENST00000615020 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
AP003027.1-201ENST00000615020 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
AP003027.1-201ENST00000615020 MYT1Q01538 1121 aa17.54■□□□□ 0.4
AP003027.1-201ENST00000615020 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
AP003027.1-201ENST00000615020 NCAPD3P42695 1498 aa17.47■□□□□ 0.39
AP003027.1-201ENST00000615020 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
AP003027.1-201ENST00000615020 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
AP003027.1-201ENST00000615020 BAZ1AQ9NRL2 1556 aaPredicted RBP17.39■□□□□ 0.38
AP003027.1-201ENST00000615020 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
AP003027.1-201ENST00000615020 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
AP003027.1-201ENST00000615020 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.36
AP003027.1-201ENST00000615020 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
AP003027.1-201ENST00000615020 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
AP003027.1-201ENST00000615020 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
AP003027.1-201ENST00000615020 NESP48681 1621 aa17.25■□□□□ 0.35
AP003027.1-201ENST00000615020 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
AP003027.1-201ENST00000615020 WIZO95785 1651 aa17.16■□□□□ 0.34
AP003027.1-201ENST00000615020 CUX2O14529 1486 aa17.13■□□□□ 0.33
AP003027.1-201ENST00000615020 DAXXQ9UER7 740 aaPredicted RBP17.11■□□□□ 0.33
AP003027.1-201ENST00000615020 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.32
AP003027.1-201ENST00000615020 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
AP003027.1-201ENST00000615020 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
AP003027.1-201ENST00000615020 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
AP003027.1-201ENST00000615020 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
AP003027.1-201ENST00000615020 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
AP003027.1-201ENST00000615020 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
AP003027.1-201ENST00000615020 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
AP003027.1-201ENST00000615020 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.29
AP003027.1-201ENST00000615020 APLP2Q06481 763 aa16.81■□□□□ 0.28
AP003027.1-201ENST00000615020 WDR62O43379 1518 aa16.8■□□□□ 0.28
AP003027.1-201ENST00000615020 CFTRP13569 1480 aa16.79■□□□□ 0.28
AP003027.1-201ENST00000615020 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
AP003027.1-201ENST00000615020 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
AP003027.1-201ENST00000615020 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
AP003027.1-201ENST00000615020 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
AP003027.1-201ENST00000615020 PRDM2Q13029 1718 aa16.71■□□□□ 0.27
AP003027.1-201ENST00000615020 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
AP003027.1-201ENST00000615020 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
AP003027.1-201ENST00000615020 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
AP003027.1-201ENST00000615020 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
AP003027.1-201ENST00000615020 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
AP003027.1-201ENST00000615020 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
AP003027.1-201ENST00000615020 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
AP003027.1-201ENST00000615020 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
AP003027.1-201ENST00000615020 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
AP003027.1-201ENST00000615020 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
AP003027.1-201ENST00000615020 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
AP003027.1-201ENST00000615020 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
AP003027.1-201ENST00000615020 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
AP003027.1-201ENST00000615020 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
AP003027.1-201ENST00000615020 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
AP003027.1-201ENST00000615020 AQRO60306 1485 aaKnown RBP eCLIP16.31■□□□□ 0.2
AP003027.1-201ENST00000615020 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
AP003027.1-201ENST00000615020 EHMT2Q96KQ7 1210 aa16.29■□□□□ 0.2
AP003027.1-201ENST00000615020 CUX1P39880 1505 aa16.28■□□□□ 0.2
AP003027.1-201ENST00000615020 CHD1O14646 1710 aa16.27■□□□□ 0.19
AP003027.1-201ENST00000615020 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
AP003027.1-201ENST00000615020 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
AP003027.1-201ENST00000615020 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
AP003027.1-201ENST00000615020 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
AP003027.1-201ENST00000615020 SOGA1O94964 1423 aa16.22■□□□□ 0.19
AP003027.1-201ENST00000615020 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
AP003027.1-201ENST00000615020 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
AP003027.1-201ENST00000615020 ARHGEF11O15085 1522 aa16.17■□□□□ 0.18
AP003027.1-201ENST00000615020 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
AP003027.1-201ENST00000615020 FBLN2P98095 1184 aa16.14■□□□□ 0.17
AP003027.1-201ENST00000615020 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
AP003027.1-201ENST00000615020 PLPPR3Q6T4P5 718 aa16.11■□□□□ 0.17
AP003027.1-201ENST00000615020 PBRM1Q86U86 1689 aa16.1■□□□□ 0.17
AP003027.1-201ENST00000615020 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
AP003027.1-201ENST00000615020 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
AP003027.1-201ENST00000615020 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
AP003027.1-201ENST00000615020 SYNJ1O43426 1573 aa16.06■□□□□ 0.16
AP003027.1-201ENST00000615020 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
AP003027.1-201ENST00000615020 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
AP003027.1-201ENST00000615020 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
AP003027.1-201ENST00000615020 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
AP003027.1-201ENST00000615020 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
AP003027.1-201ENST00000615020 ARAP1Q96P48 1450 aa16.02■□□□□ 0.16
AP003027.1-201ENST00000615020 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
AP003027.1-201ENST00000615020 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms