RNA–Protein interactions for RNA: ENST00000614784.1

SPPL2B-210, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 1,411 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-210ENST00000614784 NISCHQ9Y2I1 1504 aa43.57■■■■■ 4.56
SPPL2B-210ENST00000614784 ABCC9O60706 1549 aa39.36■■■■□ 3.89
SPPL2B-210ENST00000614784 CCDC180Q9P1Z9 1646 aa39.1■■■■□ 3.85
SPPL2B-210ENST00000614784 RB1CC1Q8TDY2 1594 aa37.3■■■■□ 3.56
SPPL2B-210ENST00000614784 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
SPPL2B-210ENST00000614784 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.51
SPPL2B-210ENST00000614784 NACADO15069 1562 aa36.98■■■■□ 3.51
SPPL2B-210ENST00000614784 PABPN1Q86U42 306 aaKnown RBP eCLIP36.67■■■■□ 3.46
SPPL2B-210ENST00000614784 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
SPPL2B-210ENST00000614784 MYO15BQ96JP2 1530 aa36.36■■■■□ 3.41
SPPL2B-210ENST00000614784 BICRAQ9NZM4 1560 aa36.25■■■■□ 3.39
SPPL2B-210ENST00000614784 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.37
SPPL2B-210ENST00000614784 DCAF1Q9Y4B6 1507 aa35.88■■■■□ 3.33
SPPL2B-210ENST00000614784 SCRIBQ14160 1630 aa35.75■■■■□ 3.31
SPPL2B-210ENST00000614784 SHROOM4Q9ULL8 1493 aa35.59■■■■□ 3.29
SPPL2B-210ENST00000614784 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
SPPL2B-210ENST00000614784 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
SPPL2B-210ENST00000614784 EIF4G1Q04637 1599 aaKnown RBP35.37■■■■□ 3.25
SPPL2B-210ENST00000614784 NCAPD3P42695 1498 aa34.15■■■■□ 3.06
SPPL2B-210ENST00000614784 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
SPPL2B-210ENST00000614784 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
SPPL2B-210ENST00000614784 DNAJC5Q9H3Z4 198 aa34.01■■■■□ 3.03
SPPL2B-210ENST00000614784 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
SPPL2B-210ENST00000614784 SMARCA2P51531 1590 aa33.94■■■■□ 3.02
SPPL2B-210ENST00000614784 HMGXB3Q12766 1538 aa33.88■■■■□ 3.01
SPPL2B-210ENST00000614784 CUX2O14529 1486 aa33.84■■■■□ 3.01
SPPL2B-210ENST00000614784 BAZ1AQ9NRL2 1556 aaPredicted RBP33.8■■■■□ 3
SPPL2B-210ENST00000614784 NESP48681 1621 aa33.79■■■■□ 3
SPPL2B-210ENST00000614784 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■□□ 2.99
SPPL2B-210ENST00000614784 MROH2BQ7Z745 1585 aa33.63■■■□□ 2.97
SPPL2B-210ENST00000614784 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
SPPL2B-210ENST00000614784 LAMC3Q9Y6N6 1575 aa33.41■■■□□ 2.94
SPPL2B-210ENST00000614784 THOC2Q8NI27 1593 aaKnown RBP33.39■■■□□ 2.94
SPPL2B-210ENST00000614784 KIF21AQ7Z4S6 1674 aa33.32■■■□□ 2.92
SPPL2B-210ENST00000614784 WIZO95785 1651 aa33.24■■■□□ 2.91
SPPL2B-210ENST00000614784 PDS5BQ9NTI5 1447 aa33.23■■■□□ 2.91
SPPL2B-210ENST00000614784 CADPSQ9ULU8 1353 aa33.15■■■□□ 2.9
SPPL2B-210ENST00000614784 RSF1Q96T23 1441 aaPredicted RBP33.07■■■□□ 2.88
SPPL2B-210ENST00000614784 MRC2Q9UBG0 1479 aa32.98■■■□□ 2.87
SPPL2B-210ENST00000614784 WDR62O43379 1518 aa32.88■■■□□ 2.85
SPPL2B-210ENST00000614784 CEP164Q9UPV0 1460 aa32.84■■■□□ 2.85
SPPL2B-210ENST00000614784 FANCD2Q9BXW9 1451 aa32.8■■■□□ 2.84
SPPL2B-210ENST00000614784 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
SPPL2B-210ENST00000614784 CFTRP13569 1480 aa32.72■■■□□ 2.83
SPPL2B-210ENST00000614784 TRIM41Q8WV44 630 aa32.61■■■□□ 2.81
SPPL2B-210ENST00000614784 URB2Q14146 1524 aaKnown RBP32.56■■■□□ 2.8
SPPL2B-210ENST00000614784 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
SPPL2B-210ENST00000614784 PRDM2Q13029 1718 aa32.41■■■□□ 2.78
SPPL2B-210ENST00000614784 CCDC88BA6NC98 1476 aa32.41■■■□□ 2.78
SPPL2B-210ENST00000614784 OSCARQ8IYS5 282 aa32.34■■■□□ 2.77
SPPL2B-210ENST00000614784 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
SPPL2B-210ENST00000614784 TOPBP1Q92547 1522 aa32.17■■■□□ 2.74
SPPL2B-210ENST00000614784 IFT140Q96RY7 1462 aa32.16■■■□□ 2.74
SPPL2B-210ENST00000614784 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.72
SPPL2B-210ENST00000614784 ABCC8Q09428 1581 aa32■■■□□ 2.71
SPPL2B-210ENST00000614784 EIF4G3O43432 1585 aaKnown RBP31.98■■■□□ 2.71
SPPL2B-210ENST00000614784 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
SPPL2B-210ENST00000614784 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
SPPL2B-210ENST00000614784 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
SPPL2B-210ENST00000614784 AQRO60306 1485 aaKnown RBP eCLIP31.9■■■□□ 2.72e-8■■■□□ 16.8
SPPL2B-210ENST00000614784 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
SPPL2B-210ENST00000614784 POLA1P09884 1462 aaPredicted RBP31.83■■■□□ 2.69
SPPL2B-210ENST00000614784 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
SPPL2B-210ENST00000614784 CHD1O14646 1710 aa31.8■■■□□ 2.68
SPPL2B-210ENST00000614784 FBLN2P98095 1184 aa31.77■■■□□ 2.68
SPPL2B-210ENST00000614784 RAD54L2Q9Y4B4 1467 aa31.77■■■□□ 2.68
SPPL2B-210ENST00000614784 SOGA1O94964 1423 aa31.69■■■□□ 2.66
SPPL2B-210ENST00000614784 TDRD9Q8NDG6 1382 aaKnown RBP31.68■■■□□ 2.66
SPPL2B-210ENST00000614784 CYB5RLQ6IPT4 315 aa31.66■■■□□ 2.66
SPPL2B-210ENST00000614784 FGD5Q6ZNL6 1462 aa31.63■■■□□ 2.65
SPPL2B-210ENST00000614784 CUX1P39880 1505 aa31.59■■■□□ 2.65
SPPL2B-210ENST00000614784 SNAPC4Q5SXM2 1469 aa31.55■■■□□ 2.64
SPPL2B-210ENST00000614784 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
SPPL2B-210ENST00000614784 CHMP7Q8WUX9 453 aaPredicted RBP31.44■■■□□ 2.62
SPPL2B-210ENST00000614784 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
SPPL2B-210ENST00000614784 GRIN2BQ13224 1484 aa31.4■■■□□ 2.62
SPPL2B-210ENST00000614784 MAGI1Q96QZ7 1491 aaPredicted RBP31.39■■■□□ 2.61
SPPL2B-210ENST00000614784 TRHP20396 242 aaPredicted RBP31.37■■■□□ 2.61
SPPL2B-210ENST00000614784 CLASP1Q7Z460 1538 aa31.37■■■□□ 2.61
SPPL2B-210ENST00000614784 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
SPPL2B-210ENST00000614784 PBRM1Q86U86 1689 aa31.31■■■□□ 2.6
SPPL2B-210ENST00000614784 SYNJ2O15056 1496 aa31.3■■■□□ 2.6
SPPL2B-210ENST00000614784 GAPVD1Q14C86 1478 aa31.29■■■□□ 2.6
SPPL2B-210ENST00000614784 ABCA10Q8WWZ4 1543 aa31.22■■■□□ 2.59
SPPL2B-210ENST00000614784 ABCA5Q8WWZ7 1642 aa31.2■■■□□ 2.58
SPPL2B-210ENST00000614784 WRNQ14191 1432 aaPredicted RBP eCLIP31.11■■■□□ 2.57
SPPL2B-210ENST00000614784 BIVM-ERCC5R4GMW8 1640 aa31.04■■■□□ 2.56
SPPL2B-210ENST00000614784 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
SPPL2B-210ENST00000614784 GRIN2AQ12879 1464 aa31.01■■■□□ 2.55
SPPL2B-210ENST00000614784 ADAMTS12P58397 1594 aa30.99■■■□□ 2.55
SPPL2B-210ENST00000614784 ERCC6L2Q5T890 1561 aa30.96■■■□□ 2.55
SPPL2B-210ENST00000614784 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
SPPL2B-210ENST00000614784 NUP160Q12769 1436 aa30.89■■■□□ 2.53
SPPL2B-210ENST00000614784 FHAD1B1AJZ9 1412 aa30.87■■■□□ 2.53
SPPL2B-210ENST00000614784 ERICH3Q5RHP9 1530 aa30.81■■■□□ 2.52
SPPL2B-210ENST00000614784 SHROOM2Q13796 1616 aa30.76■■■□□ 2.51
SPPL2B-210ENST00000614784 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
SPPL2B-210ENST00000614784 JPH4Q96JJ6 628 aa30.62■■■□□ 2.49
SPPL2B-210ENST00000614784 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
SPPL2B-210ENST00000614784 RUSC2Q8N2Y8 1516 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms