RNA–Protein interactions for RNA: ENST00000614078.4

PCSK4-213, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-213ENST00000614078 NISCHQ9Y2I1 1504 aa44.12■■■■■ 4.65
PCSK4-213ENST00000614078 ABCC9O60706 1549 aa39.73■■■■□ 3.95
PCSK4-213ENST00000614078 CCDC180Q9P1Z9 1646 aa39.17■■■■□ 3.86
PCSK4-213ENST00000614078 DNAJC5BQ9UF47 199 aa37.67■■■■□ 3.62
PCSK4-213ENST00000614078 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
PCSK4-213ENST00000614078 DCAF8L2P0C7V8 631 aa37.12■■■■□ 3.53
PCSK4-213ENST00000614078 NACADO15069 1562 aa37.1■■■■□ 3.53
PCSK4-213ENST00000614078 PABPN1Q86U42 306 aaKnown RBP eCLIP37■■■■□ 3.51
PCSK4-213ENST00000614078 UNC13AQ9UPW8 1703 aa36.84■■■■□ 3.49
PCSK4-213ENST00000614078 ZCCHC6Q5VYS8 1495 aaKnown RBP36.75■■■■□ 3.47
PCSK4-213ENST00000614078 MYO15BQ96JP2 1530 aa36.7■■■■□ 3.47
PCSK4-213ENST00000614078 DCAF1Q9Y4B6 1507 aa36.58■■■■□ 3.45
PCSK4-213ENST00000614078 BICRAQ9NZM4 1560 aa36.55■■■■□ 3.44
PCSK4-213ENST00000614078 SCRIBQ14160 1630 aa35.9■■■■□ 3.34
PCSK4-213ENST00000614078 CC2D2AQ9P2K1 1620 aa35.81■■■■□ 3.32
PCSK4-213ENST00000614078 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
PCSK4-213ENST00000614078 SHROOM4Q9ULL8 1493 aa35.66■■■■□ 3.3
PCSK4-213ENST00000614078 EIF4G1Q04637 1599 aaKnown RBP35.61■■■■□ 3.29
PCSK4-213ENST00000614078 DNAJC5Q9H3Z4 198 aa34.61■■■■□ 3.13
PCSK4-213ENST00000614078 NCAPD3P42695 1498 aa34.28■■■■□ 3.08
PCSK4-213ENST00000614078 ATAD2BQ9ULI0 1458 aa34.21■■■■□ 3.07
PCSK4-213ENST00000614078 ERCC6Q03468 1493 aa34.2■■■■□ 3.07
PCSK4-213ENST00000614078 BAZ1AQ9NRL2 1556 aaPredicted RBP34.2■■■■□ 3.07
PCSK4-213ENST00000614078 SMARCA4P51532 1647 aa34.14■■■■□ 3.06
PCSK4-213ENST00000614078 CUX2O14529 1486 aa34.14■■■■□ 3.06
PCSK4-213ENST00000614078 NESP48681 1621 aa34.08■■■■□ 3.05
PCSK4-213ENST00000614078 SMARCA2P51531 1590 aa34■■■■□ 3.03
PCSK4-213ENST00000614078 HMGXB3Q12766 1538 aa33.98■■■■□ 3.03
PCSK4-213ENST00000614078 MROH2BQ7Z745 1585 aa33.94■■■■□ 3.02
PCSK4-213ENST00000614078 PEG3Q9GZU2 1588 aa33.86■■■■□ 3.01
PCSK4-213ENST00000614078 BAZ1BQ9UIG0 1483 aaKnown RBP33.84■■■■□ 3.01
PCSK4-213ENST00000614078 RSF1Q96T23 1441 aaPredicted RBP33.69■■■□□ 2.98
PCSK4-213ENST00000614078 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
PCSK4-213ENST00000614078 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
PCSK4-213ENST00000614078 LAMC3Q9Y6N6 1575 aa33.55■■■□□ 2.96
PCSK4-213ENST00000614078 WIZO95785 1651 aa33.55■■■□□ 2.96
PCSK4-213ENST00000614078 PDS5BQ9NTI5 1447 aa33.36■■■□□ 2.93
PCSK4-213ENST00000614078 TOP2AP11388 1531 aaKnown RBP33.27■■■□□ 2.92
PCSK4-213ENST00000614078 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
PCSK4-213ENST00000614078 MRC2Q9UBG0 1479 aa33.15■■■□□ 2.9
PCSK4-213ENST00000614078 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
PCSK4-213ENST00000614078 WDR62O43379 1518 aa33.07■■■□□ 2.89
PCSK4-213ENST00000614078 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
PCSK4-213ENST00000614078 CEP164Q9UPV0 1460 aa32.95■■■□□ 2.87
PCSK4-213ENST00000614078 FANCD2Q9BXW9 1451 aa32.93■■■□□ 2.86
PCSK4-213ENST00000614078 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
PCSK4-213ENST00000614078 CFTRP13569 1480 aa32.82■■■□□ 2.84
PCSK4-213ENST00000614078 URB2Q14146 1524 aaKnown RBP32.75■■■□□ 2.83
PCSK4-213ENST00000614078 OSCARQ8IYS5 282 aa32.59■■■□□ 2.81
PCSK4-213ENST00000614078 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
PCSK4-213ENST00000614078 ZNF608Q9ULD9 1512 aaPredicted RBP32.45■■■□□ 2.78
PCSK4-213ENST00000614078 RIMBP3CA6NJZ7 1639 aa32.32■■■□□ 2.76
PCSK4-213ENST00000614078 RIMBP3BA6NNM3 1639 aa32.32■■■□□ 2.76
PCSK4-213ENST00000614078 RIMBP3Q9UFD9 1639 aa32.32■■■□□ 2.76
PCSK4-213ENST00000614078 TOPBP1Q92547 1522 aa32.29■■■□□ 2.76
PCSK4-213ENST00000614078 IFT140Q96RY7 1462 aa32.27■■■□□ 2.76
PCSK4-213ENST00000614078 ABCC8Q09428 1581 aa32.19■■■□□ 2.74
PCSK4-213ENST00000614078 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
PCSK4-213ENST00000614078 ARHGEF11O15085 1522 aa32.15■■■□□ 2.74
PCSK4-213ENST00000614078 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
PCSK4-213ENST00000614078 DNMBPQ6XZF7 1577 aa32.09■■■□□ 2.73
PCSK4-213ENST00000614078 CHD1O14646 1710 aa32.05■■■□□ 2.72
PCSK4-213ENST00000614078 TARBP1Q13395 1621 aaKnown RBP32.04■■■□□ 2.72
PCSK4-213ENST00000614078 CYB5RLQ6IPT4 315 aa31.99■■■□□ 2.71
PCSK4-213ENST00000614078 FBLN2P98095 1184 aa31.95■■■□□ 2.71
PCSK4-213ENST00000614078 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
PCSK4-213ENST00000614078 RAD54L2Q9Y4B4 1467 aa31.93■■■□□ 2.7
PCSK4-213ENST00000614078 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
PCSK4-213ENST00000614078 TDRD9Q8NDG6 1382 aaKnown RBP31.84■■■□□ 2.69
PCSK4-213ENST00000614078 CUX1P39880 1505 aa31.83■■■□□ 2.69
PCSK4-213ENST00000614078 SOGA1O94964 1423 aa31.78■■■□□ 2.68
PCSK4-213ENST00000614078 WRNQ14191 1432 aaPredicted RBP eCLIP31.78■■■□□ 2.68
PCSK4-213ENST00000614078 TRHP20396 242 aaPredicted RBP31.72■■■□□ 2.67
PCSK4-213ENST00000614078 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
PCSK4-213ENST00000614078 SNAPC4Q5SXM2 1469 aa31.71■■■□□ 2.67
PCSK4-213ENST00000614078 TOP2BQ02880 1626 aa31.64■■■□□ 2.66
PCSK4-213ENST00000614078 BIVM-ERCC5R4GMW8 1640 aa31.6■■■□□ 2.65
PCSK4-213ENST00000614078 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
PCSK4-213ENST00000614078 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
PCSK4-213ENST00000614078 CHMP7Q8WUX9 453 aaPredicted RBP31.55■■■□□ 2.64
PCSK4-213ENST00000614078 WDR97A6NE52 1622 aa31.51■■■□□ 2.63
PCSK4-213ENST00000614078 ABCA10Q8WWZ4 1543 aa31.48■■■□□ 2.63
PCSK4-213ENST00000614078 GRIN2BQ13224 1484 aa31.47■■■□□ 2.63
PCSK4-213ENST00000614078 MAGI1Q96QZ7 1491 aaPredicted RBP31.47■■■□□ 2.63
PCSK4-213ENST00000614078 PBRM1Q86U86 1689 aa31.43■■■□□ 2.62
PCSK4-213ENST00000614078 SYNJ2O15056 1496 aa31.41■■■□□ 2.62
PCSK4-213ENST00000614078 GAPVD1Q14C86 1478 aa31.36■■■□□ 2.61
PCSK4-213ENST00000614078 ABCA5Q8WWZ7 1642 aa31.28■■■□□ 2.6
PCSK4-213ENST00000614078 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.59
PCSK4-213ENST00000614078 KIF27Q86VH2 1401 aa31.15■■■□□ 2.58
PCSK4-213ENST00000614078 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
PCSK4-213ENST00000614078 ERICH3Q5RHP9 1530 aa31.11■■■□□ 2.57
PCSK4-213ENST00000614078 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
PCSK4-213ENST00000614078 ADAMTS12P58397 1594 aa31.08■■■□□ 2.57
PCSK4-213ENST00000614078 FHAD1B1AJZ9 1412 aa31.02■■■□□ 2.56
PCSK4-213ENST00000614078 NUP160Q12769 1436 aa30.99■■■□□ 2.55
PCSK4-213ENST00000614078 IGF1RP08069 1367 aa30.99■■■□□ 2.55
PCSK4-213ENST00000614078 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
PCSK4-213ENST00000614078 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
PCSK4-213ENST00000614078 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms