RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-222ENST00000613916 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
PVT1-222ENST00000613916 ABCC9O60706 1549 aa15.58■□□□□ 0.08
PVT1-222ENST00000613916 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
PVT1-222ENST00000613916 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
PVT1-222ENST00000613916 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
PVT1-222ENST00000613916 NACADO15069 1562 aa14.54□□□□□ -0.08
PVT1-222ENST00000613916 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
PVT1-222ENST00000613916 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
PVT1-222ENST00000613916 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
PVT1-222ENST00000613916 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.12
PVT1-222ENST00000613916 ZCCHC6Q5VYS8 1495 aaKnown RBP14.23□□□□□ -0.13
PVT1-222ENST00000613916 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
PVT1-222ENST00000613916 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
PVT1-222ENST00000613916 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
PVT1-222ENST00000613916 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
PVT1-222ENST00000613916 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
PVT1-222ENST00000613916 DCAF1Q9Y4B6 1507 aa14.04□□□□□ -0.16
PVT1-222ENST00000613916 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
PVT1-222ENST00000613916 SCRIBQ14160 1630 aa13.83□□□□□ -0.2
PVT1-222ENST00000613916 CUX2O14529 1486 aa13.67□□□□□ -0.22
PVT1-222ENST00000613916 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
PVT1-222ENST00000613916 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
PVT1-222ENST00000613916 HMGXB3Q12766 1538 aa13.32□□□□□ -0.28
PVT1-222ENST00000613916 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
PVT1-222ENST00000613916 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
PVT1-222ENST00000613916 NESP48681 1621 aa13.28□□□□□ -0.28
PVT1-222ENST00000613916 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
PVT1-222ENST00000613916 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
PVT1-222ENST00000613916 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
PVT1-222ENST00000613916 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
PVT1-222ENST00000613916 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
PVT1-222ENST00000613916 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
PVT1-222ENST00000613916 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
PVT1-222ENST00000613916 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
PVT1-222ENST00000613916 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
PVT1-222ENST00000613916 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
PVT1-222ENST00000613916 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
PVT1-222ENST00000613916 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
PVT1-222ENST00000613916 WDR62O43379 1518 aa13.04□□□□□ -0.32
PVT1-222ENST00000613916 WIZO95785 1651 aa13.04□□□□□ -0.32
PVT1-222ENST00000613916 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
PVT1-222ENST00000613916 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
PVT1-222ENST00000613916 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
PVT1-222ENST00000613916 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
PVT1-222ENST00000613916 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
PVT1-222ENST00000613916 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.36
PVT1-222ENST00000613916 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.36
PVT1-222ENST00000613916 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.36
PVT1-222ENST00000613916 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
PVT1-222ENST00000613916 CFTRP13569 1480 aa12.76□□□□□ -0.37
PVT1-222ENST00000613916 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
PVT1-222ENST00000613916 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
PVT1-222ENST00000613916 CCDC88BA6NC98 1476 aa12.71□□□□□ -0.38
PVT1-222ENST00000613916 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
PVT1-222ENST00000613916 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
PVT1-222ENST00000613916 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
PVT1-222ENST00000613916 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
PVT1-222ENST00000613916 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
PVT1-222ENST00000613916 CHIC1Q5VXU3 224 aa12.56□□□□□ -0.4
PVT1-222ENST00000613916 CYB5RLQ6IPT4 315 aa12.55□□□□□ -0.4
PVT1-222ENST00000613916 CHD1O14646 1710 aa12.54□□□□□ -0.4
PVT1-222ENST00000613916 TOPBP1Q92547 1522 aa12.53□□□□□ -0.4
PVT1-222ENST00000613916 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
PVT1-222ENST00000613916 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
PVT1-222ENST00000613916 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
PVT1-222ENST00000613916 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
PVT1-222ENST00000613916 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
PVT1-222ENST00000613916 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
PVT1-222ENST00000613916 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.429e-17■■■□□ 15.2
PVT1-222ENST00000613916 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
PVT1-222ENST00000613916 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
PVT1-222ENST00000613916 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
PVT1-222ENST00000613916 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
PVT1-222ENST00000613916 FBLN2P98095 1184 aa12.32□□□□□ -0.44
PVT1-222ENST00000613916 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
PVT1-222ENST00000613916 MAGI1Q96QZ7 1491 aaPredicted RBP12.32□□□□□ -0.44
PVT1-222ENST00000613916 WRNQ14191 1432 aaPredicted RBP eCLIP12.3□□□□□ -0.44
PVT1-222ENST00000613916 RAD54L2Q9Y4B4 1467 aa12.29□□□□□ -0.44
PVT1-222ENST00000613916 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
PVT1-222ENST00000613916 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.44
PVT1-222ENST00000613916 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
PVT1-222ENST00000613916 SYNJ2O15056 1496 aa12.27□□□□□ -0.45
PVT1-222ENST00000613916 CUX1P39880 1505 aa12.27□□□□□ -0.45
PVT1-222ENST00000613916 SOGA1O94964 1423 aa12.26□□□□□ -0.45
PVT1-222ENST00000613916 GRIN2BQ13224 1484 aa12.25□□□□□ -0.45
PVT1-222ENST00000613916 FGD5Q6ZNL6 1462 aa12.23□□□□□ -0.45
PVT1-222ENST00000613916 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
PVT1-222ENST00000613916 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
PVT1-222ENST00000613916 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
PVT1-222ENST00000613916 ABCA5Q8WWZ7 1642 aa12.15□□□□□ -0.46
PVT1-222ENST00000613916 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
PVT1-222ENST00000613916 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
PVT1-222ENST00000613916 SHROOM2Q13796 1616 aa12.12□□□□□ -0.47
PVT1-222ENST00000613916 CEP170Q5SW79 1584 aa12.11□□□□□ -0.47
PVT1-222ENST00000613916 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
PVT1-222ENST00000613916 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
PVT1-222ENST00000613916 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
PVT1-222ENST00000613916 NUP160Q12769 1436 aa12.1□□□□□ -0.47
PVT1-222ENST00000613916 EEA1Q15075 1411 aa12.08□□□□□ -0.48
PVT1-222ENST00000613916 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms