RNA–Protein interactions for RNA: ENST00000613632.4

PHF23-213, Transcript of PHD finger protein 23, humanhuman

TSL 5 BASIC

Gene PHF23, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF23-213ENST00000613632 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
PHF23-213ENST00000613632 ABCC9O60706 1549 aa29.36■■■□□ 2.29
PHF23-213ENST00000613632 CCDC180Q9P1Z9 1646 aa29.17■■■□□ 2.26
PHF23-213ENST00000613632 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
PHF23-213ENST00000613632 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
PHF23-213ENST00000613632 NACADO15069 1562 aa27.71■■■□□ 2.03
PHF23-213ENST00000613632 DCAF8L2P0C7V8 631 aa27.4■■□□□ 1.98
PHF23-213ENST00000613632 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
PHF23-213ENST00000613632 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
PHF23-213ENST00000613632 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
PHF23-213ENST00000613632 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
PHF23-213ENST00000613632 SHROOM4Q9ULL8 1493 aa26.87■■□□□ 1.89
PHF23-213ENST00000613632 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
PHF23-213ENST00000613632 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
PHF23-213ENST00000613632 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
PHF23-213ENST00000613632 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
PHF23-213ENST00000613632 SCRIBQ14160 1630 aa26.45■■□□□ 1.82
PHF23-213ENST00000613632 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
PHF23-213ENST00000613632 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
PHF23-213ENST00000613632 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
PHF23-213ENST00000613632 CUX2O14529 1486 aa25.57■■□□□ 1.68
PHF23-213ENST00000613632 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
PHF23-213ENST00000613632 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
PHF23-213ENST00000613632 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
PHF23-213ENST00000613632 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
PHF23-213ENST00000613632 SMARCA4P51532 1647 aa25.27■■□□□ 1.64
PHF23-213ENST00000613632 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
PHF23-213ENST00000613632 BAZ1BQ9UIG0 1483 aaKnown RBP25.16■■□□□ 1.62
PHF23-213ENST00000613632 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
PHF23-213ENST00000613632 NESP48681 1621 aa25.11■■□□□ 1.61
PHF23-213ENST00000613632 LAMC3Q9Y6N6 1575 aa25.02■■□□□ 1.6
PHF23-213ENST00000613632 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.59
PHF23-213ENST00000613632 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
PHF23-213ENST00000613632 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
PHF23-213ENST00000613632 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
PHF23-213ENST00000613632 KIF21AQ7Z4S6 1674 aa24.74■■□□□ 1.55
PHF23-213ENST00000613632 MRC2Q9UBG0 1479 aa24.69■■□□□ 1.54
PHF23-213ENST00000613632 WDR62O43379 1518 aa24.61■■□□□ 1.53
PHF23-213ENST00000613632 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
PHF23-213ENST00000613632 WIZO95785 1651 aa24.5■■□□□ 1.51
PHF23-213ENST00000613632 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
PHF23-213ENST00000613632 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
PHF23-213ENST00000613632 CFTRP13569 1480 aa24.44■■□□□ 1.5
PHF23-213ENST00000613632 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
PHF23-213ENST00000613632 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
PHF23-213ENST00000613632 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
PHF23-213ENST00000613632 URB2Q14146 1524 aaKnown RBP24.23■■□□□ 1.47
PHF23-213ENST00000613632 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
PHF23-213ENST00000613632 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
PHF23-213ENST00000613632 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
PHF23-213ENST00000613632 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
PHF23-213ENST00000613632 ZNF608Q9ULD9 1512 aaPredicted RBP23.95■■□□□ 1.43
PHF23-213ENST00000613632 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
PHF23-213ENST00000613632 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
PHF23-213ENST00000613632 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
PHF23-213ENST00000613632 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
PHF23-213ENST00000613632 ARHGEF11O15085 1522 aa23.87■■□□□ 1.41
PHF23-213ENST00000613632 DNMBPQ6XZF7 1577 aa23.85■■□□□ 1.41
PHF23-213ENST00000613632 EIF4G3O43432 1585 aaKnown RBP23.81■■□□□ 1.4
PHF23-213ENST00000613632 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
PHF23-213ENST00000613632 AQRO60306 1485 aaKnown RBP eCLIP23.73■■□□□ 1.395e-8■■■■□ 24.2
PHF23-213ENST00000613632 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
PHF23-213ENST00000613632 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
PHF23-213ENST00000613632 FBLN2P98095 1184 aa23.65■■□□□ 1.38
PHF23-213ENST00000613632 CHD1O14646 1710 aa23.62■■□□□ 1.37
PHF23-213ENST00000613632 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PHF23-213ENST00000613632 WDR97A6NE52 1622 aa23.6■■□□□ 1.37
PHF23-213ENST00000613632 ARAP1Q96P48 1450 aa23.6■■□□□ 1.37
PHF23-213ENST00000613632 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
PHF23-213ENST00000613632 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
PHF23-213ENST00000613632 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
PHF23-213ENST00000613632 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
PHF23-213ENST00000613632 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
PHF23-213ENST00000613632 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
PHF23-213ENST00000613632 SNAPC4Q5SXM2 1469 aa23.48■■□□□ 1.35
PHF23-213ENST00000613632 GRIN2BQ13224 1484 aa23.46■■□□□ 1.35
PHF23-213ENST00000613632 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
PHF23-213ENST00000613632 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
PHF23-213ENST00000613632 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
PHF23-213ENST00000613632 CUX1P39880 1505 aa23.39■■□□□ 1.34
PHF23-213ENST00000613632 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
PHF23-213ENST00000613632 ABCA10Q8WWZ4 1543 aa23.26■■□□□ 1.31
PHF23-213ENST00000613632 PBRM1Q86U86 1689 aa23.2■■□□□ 1.3
PHF23-213ENST00000613632 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
PHF23-213ENST00000613632 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PHF23-213ENST00000613632 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
PHF23-213ENST00000613632 GRIN2AQ12879 1464 aa23.12■■□□□ 1.29
PHF23-213ENST00000613632 NUP160Q12769 1436 aa23.08■■□□□ 1.29
PHF23-213ENST00000613632 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
PHF23-213ENST00000613632 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
PHF23-213ENST00000613632 CEP170Q5SW79 1584 aa23■■□□□ 1.27
PHF23-213ENST00000613632 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
PHF23-213ENST00000613632 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
PHF23-213ENST00000613632 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PHF23-213ENST00000613632 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
PHF23-213ENST00000613632 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
PHF23-213ENST00000613632 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
PHF23-213ENST00000613632 PRG4Q92954 1404 aaPredicted RBP22.86■■□□□ 1.25
PHF23-213ENST00000613632 JPH4Q96JJ6 628 aa22.86■■□□□ 1.25
PHF23-213ENST00000613632 NPM1P06748 294 aaKnown RBP eCLIP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms