RNA–Protein interactions for RNA: ENST00000613441.1

RN7SL261P-201, Transcript of RNA, 7SL, cytoplasmic 261, pseudogene, humanhuman

BASIC

Gene RN7SL261P, Length 282 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL261P-201ENST00000613441 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
RN7SL261P-201ENST00000613441 ABCC9O60706 1549 aa15.06■□□□□ 0
RN7SL261P-201ENST00000613441 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
RN7SL261P-201ENST00000613441 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
RN7SL261P-201ENST00000613441 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
RN7SL261P-201ENST00000613441 RB1CC1Q8TDY2 1594 aa13.98□□□□□ -0.17
RN7SL261P-201ENST00000613441 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
RN7SL261P-201ENST00000613441 NACADO15069 1562 aa13.76□□□□□ -0.21
RN7SL261P-201ENST00000613441 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
RN7SL261P-201ENST00000613441 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
RN7SL261P-201ENST00000613441 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
RN7SL261P-201ENST00000613441 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
RN7SL261P-201ENST00000613441 CC2D2AQ9P2K1 1620 aa13.5□□□□□ -0.25
RN7SL261P-201ENST00000613441 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
RN7SL261P-201ENST00000613441 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
RN7SL261P-201ENST00000613441 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
RN7SL261P-201ENST00000613441 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
RN7SL261P-201ENST00000613441 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
RN7SL261P-201ENST00000613441 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
RN7SL261P-201ENST00000613441 CUX2O14529 1486 aa12.98□□□□□ -0.33
RN7SL261P-201ENST00000613441 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
RN7SL261P-201ENST00000613441 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
RN7SL261P-201ENST00000613441 NESP48681 1621 aa12.84□□□□□ -0.35
RN7SL261P-201ENST00000613441 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
RN7SL261P-201ENST00000613441 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.38
RN7SL261P-201ENST00000613441 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
RN7SL261P-201ENST00000613441 SMARCA2P51531 1590 aa12.65□□□□□ -0.38
RN7SL261P-201ENST00000613441 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
RN7SL261P-201ENST00000613441 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
RN7SL261P-201ENST00000613441 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
RN7SL261P-201ENST00000613441 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
RN7SL261P-201ENST00000613441 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
RN7SL261P-201ENST00000613441 PDS5BQ9NTI5 1447 aa12.47□□□□□ -0.41
RN7SL261P-201ENST00000613441 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
RN7SL261P-201ENST00000613441 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
RN7SL261P-201ENST00000613441 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
RN7SL261P-201ENST00000613441 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
RN7SL261P-201ENST00000613441 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
RN7SL261P-201ENST00000613441 WDR62O43379 1518 aa12.38□□□□□ -0.43
RN7SL261P-201ENST00000613441 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
RN7SL261P-201ENST00000613441 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
RN7SL261P-201ENST00000613441 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
RN7SL261P-201ENST00000613441 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
RN7SL261P-201ENST00000613441 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
RN7SL261P-201ENST00000613441 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
RN7SL261P-201ENST00000613441 WIZO95785 1651 aa12.23□□□□□ -0.45
RN7SL261P-201ENST00000613441 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
RN7SL261P-201ENST00000613441 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
RN7SL261P-201ENST00000613441 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
RN7SL261P-201ENST00000613441 ARHGEF11O15085 1522 aa12.21□□□□□ -0.46
RN7SL261P-201ENST00000613441 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
RN7SL261P-201ENST00000613441 CFTRP13569 1480 aa12.14□□□□□ -0.47
RN7SL261P-201ENST00000613441 AEBP2Q6ZN18 517 aaPredicted RBP12.13□□□□□ -0.47
RN7SL261P-201ENST00000613441 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
RN7SL261P-201ENST00000613441 FBLN2P98095 1184 aa12.06□□□□□ -0.48
RN7SL261P-201ENST00000613441 IFT140Q96RY7 1462 aa12.04□□□□□ -0.48
RN7SL261P-201ENST00000613441 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.48
RN7SL261P-201ENST00000613441 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
RN7SL261P-201ENST00000613441 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
RN7SL261P-201ENST00000613441 CHD1O14646 1710 aa11.99□□□□□ -0.49
RN7SL261P-201ENST00000613441 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
RN7SL261P-201ENST00000613441 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
RN7SL261P-201ENST00000613441 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
RN7SL261P-201ENST00000613441 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
RN7SL261P-201ENST00000613441 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
RN7SL261P-201ENST00000613441 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
RN7SL261P-201ENST00000613441 PRDM2Q13029 1718 aa11.87□□□□□ -0.51
RN7SL261P-201ENST00000613441 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
RN7SL261P-201ENST00000613441 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
RN7SL261P-201ENST00000613441 SNAPC4Q5SXM2 1469 aa11.84□□□□□ -0.51
RN7SL261P-201ENST00000613441 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
RN7SL261P-201ENST00000613441 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
RN7SL261P-201ENST00000613441 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
RN7SL261P-201ENST00000613441 SOGA1O94964 1423 aa11.79□□□□□ -0.52
RN7SL261P-201ENST00000613441 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.52
RN7SL261P-201ENST00000613441 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
RN7SL261P-201ENST00000613441 ERCC6L2Q5T890 1561 aa11.75□□□□□ -0.53
RN7SL261P-201ENST00000613441 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
RN7SL261P-201ENST00000613441 ILDR1Q86SU0 546 aaPredicted RBP11.72□□□□□ -0.53
RN7SL261P-201ENST00000613441 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
RN7SL261P-201ENST00000613441 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
RN7SL261P-201ENST00000613441 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
RN7SL261P-201ENST00000613441 CUX1P39880 1505 aa11.66□□□□□ -0.54
RN7SL261P-201ENST00000613441 KDM4FA0A1W2PPD8 638 aa11.64□□□□□ -0.55
RN7SL261P-201ENST00000613441 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
RN7SL261P-201ENST00000613441 WDR97A6NE52 1622 aa11.59□□□□□ -0.55
RN7SL261P-201ENST00000613441 CEP170Q5SW79 1584 aa11.58□□□□□ -0.55
RN7SL261P-201ENST00000613441 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
RN7SL261P-201ENST00000613441 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
RN7SL261P-201ENST00000613441 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
RN7SL261P-201ENST00000613441 ABCA5Q8WWZ7 1642 aa11.53□□□□□ -0.56
RN7SL261P-201ENST00000613441 NUP160Q12769 1436 aa11.52□□□□□ -0.57
RN7SL261P-201ENST00000613441 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
RN7SL261P-201ENST00000613441 PRG4Q92954 1404 aaPredicted RBP11.5□□□□□ -0.57
RN7SL261P-201ENST00000613441 ADAMTS12P58397 1594 aa11.49□□□□□ -0.57
RN7SL261P-201ENST00000613441 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
RN7SL261P-201ENST00000613441 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
RN7SL261P-201ENST00000613441 JPH4Q96JJ6 628 aa11.46□□□□□ -0.57
RN7SL261P-201ENST00000613441 KDM6BO15054 1643 aa11.45□□□□□ -0.58
RN7SL261P-201ENST00000613441 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms