RNA–Protein interactions for RNA: ENST00000613217.4

NCAM1-220, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-220ENST00000613217 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
NCAM1-220ENST00000613217 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
NCAM1-220ENST00000613217 ABCC9O60706 1549 aa27.83■■■□□ 2.05
NCAM1-220ENST00000613217 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
NCAM1-220ENST00000613217 NACADO15069 1562 aa26.38■■□□□ 1.81
NCAM1-220ENST00000613217 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
NCAM1-220ENST00000613217 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
NCAM1-220ENST00000613217 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
NCAM1-220ENST00000613217 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
NCAM1-220ENST00000613217 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
NCAM1-220ENST00000613217 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.69
NCAM1-220ENST00000613217 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
NCAM1-220ENST00000613217 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
NCAM1-220ENST00000613217 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
NCAM1-220ENST00000613217 SCRIBQ14160 1630 aa25.23■■□□□ 1.63
NCAM1-220ENST00000613217 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
NCAM1-220ENST00000613217 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
NCAM1-220ENST00000613217 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
NCAM1-220ENST00000613217 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
NCAM1-220ENST00000613217 DNAJC5Q9H3Z4 198 aa24.24■■□□□ 1.47
NCAM1-220ENST00000613217 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
NCAM1-220ENST00000613217 CUX2O14529 1486 aa24.19■■□□□ 1.46
NCAM1-220ENST00000613217 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
NCAM1-220ENST00000613217 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
NCAM1-220ENST00000613217 HMGXB3Q12766 1538 aa24.15■■□□□ 1.46
NCAM1-220ENST00000613217 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
NCAM1-220ENST00000613217 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
NCAM1-220ENST00000613217 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
NCAM1-220ENST00000613217 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
NCAM1-220ENST00000613217 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
NCAM1-220ENST00000613217 NESP48681 1621 aa23.81■■□□□ 1.4
NCAM1-220ENST00000613217 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
NCAM1-220ENST00000613217 MROH2BQ7Z745 1585 aa23.73■■□□□ 1.39
NCAM1-220ENST00000613217 THOC2Q8NI27 1593 aaKnown RBP23.66■■□□□ 1.38
NCAM1-220ENST00000613217 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
NCAM1-220ENST00000613217 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
NCAM1-220ENST00000613217 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
NCAM1-220ENST00000613217 WIZO95785 1651 aa23.41■■□□□ 1.34
NCAM1-220ENST00000613217 WDR62O43379 1518 aa23.38■■□□□ 1.33
NCAM1-220ENST00000613217 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
NCAM1-220ENST00000613217 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
NCAM1-220ENST00000613217 CFTRP13569 1480 aa23.27■■□□□ 1.32
NCAM1-220ENST00000613217 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
NCAM1-220ENST00000613217 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
NCAM1-220ENST00000613217 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
NCAM1-220ENST00000613217 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
NCAM1-220ENST00000613217 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
NCAM1-220ENST00000613217 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
NCAM1-220ENST00000613217 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
NCAM1-220ENST00000613217 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
NCAM1-220ENST00000613217 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
NCAM1-220ENST00000613217 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
NCAM1-220ENST00000613217 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
NCAM1-220ENST00000613217 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
NCAM1-220ENST00000613217 EIF4G3O43432 1585 aaKnown RBP22.65■■□□□ 1.22
NCAM1-220ENST00000613217 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
NCAM1-220ENST00000613217 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
NCAM1-220ENST00000613217 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
NCAM1-220ENST00000613217 ARHGEF11O15085 1522 aa22.6■■□□□ 1.21
NCAM1-220ENST00000613217 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
NCAM1-220ENST00000613217 POLA1P09884 1462 aaPredicted RBP22.56■■□□□ 1.2
NCAM1-220ENST00000613217 AQRO60306 1485 aaKnown RBP eCLIP22.55■■□□□ 1.2
NCAM1-220ENST00000613217 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
NCAM1-220ENST00000613217 FBLN2P98095 1184 aa22.51■■□□□ 1.19
NCAM1-220ENST00000613217 SOGA1O94964 1423 aa22.5■■□□□ 1.19
NCAM1-220ENST00000613217 CHD1O14646 1710 aa22.45■■□□□ 1.19
NCAM1-220ENST00000613217 CYB5RLQ6IPT4 315 aa22.45■■□□□ 1.18
NCAM1-220ENST00000613217 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
NCAM1-220ENST00000613217 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
NCAM1-220ENST00000613217 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
NCAM1-220ENST00000613217 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
NCAM1-220ENST00000613217 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
NCAM1-220ENST00000613217 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
NCAM1-220ENST00000613217 SNAPC4Q5SXM2 1469 aa22.35■■□□□ 1.17
NCAM1-220ENST00000613217 ARAP1Q96P48 1450 aa22.33■■□□□ 1.16
NCAM1-220ENST00000613217 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
NCAM1-220ENST00000613217 CUX1P39880 1505 aa22.32■■□□□ 1.16
NCAM1-220ENST00000613217 TRHP20396 242 aaPredicted RBP22.29■■□□□ 1.16
NCAM1-220ENST00000613217 SYNJ2O15056 1496 aa22.28■■□□□ 1.16
NCAM1-220ENST00000613217 CLASP1Q7Z460 1538 aa22.26■■□□□ 1.15
NCAM1-220ENST00000613217 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
NCAM1-220ENST00000613217 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
NCAM1-220ENST00000613217 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
NCAM1-220ENST00000613217 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
NCAM1-220ENST00000613217 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
NCAM1-220ENST00000613217 ABCA5Q8WWZ7 1642 aa22.11■■□□□ 1.13
NCAM1-220ENST00000613217 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
NCAM1-220ENST00000613217 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
NCAM1-220ENST00000613217 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
NCAM1-220ENST00000613217 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
NCAM1-220ENST00000613217 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
NCAM1-220ENST00000613217 NUP160Q12769 1436 aa21.96■■□□□ 1.11
NCAM1-220ENST00000613217 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
NCAM1-220ENST00000613217 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
NCAM1-220ENST00000613217 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
NCAM1-220ENST00000613217 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
NCAM1-220ENST00000613217 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
NCAM1-220ENST00000613217 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
NCAM1-220ENST00000613217 PRG4Q92954 1404 aaPredicted RBP21.75■■□□□ 1.07
NCAM1-220ENST00000613217 NPM1P06748 294 aaKnown RBP eCLIP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms