RNA–Protein interactions for RNA: ENST00000613125.4

CBWD6-212, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-212ENST00000613125 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
CBWD6-212ENST00000613125 CCDC180Q9P1Z9 1646 aa12.93□□□□□ -0.34
CBWD6-212ENST00000613125 ABCC9O60706 1549 aa12.48□□□□□ -0.41
CBWD6-212ENST00000613125 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
CBWD6-212ENST00000613125 NACADO15069 1562 aa12.14□□□□□ -0.47
CBWD6-212ENST00000613125 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
CBWD6-212ENST00000613125 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
CBWD6-212ENST00000613125 SHROOM4Q9ULL8 1493 aa11.91□□□□□ -0.5
CBWD6-212ENST00000613125 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
CBWD6-212ENST00000613125 ZCCHC6Q5VYS8 1495 aaKnown RBP11.77□□□□□ -0.52
CBWD6-212ENST00000613125 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
CBWD6-212ENST00000613125 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
CBWD6-212ENST00000613125 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
CBWD6-212ENST00000613125 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
CBWD6-212ENST00000613125 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
CBWD6-212ENST00000613125 SCRIBQ14160 1630 aa11.46□□□□□ -0.58
CBWD6-212ENST00000613125 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
CBWD6-212ENST00000613125 CC2D2AQ9P2K1 1620 aa11.42□□□□□ -0.58
CBWD6-212ENST00000613125 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
CBWD6-212ENST00000613125 HMGXB3Q12766 1538 aa11.13□□□□□ -0.63
CBWD6-212ENST00000613125 NCAPD3P42695 1498 aa11.13□□□□□ -0.63
CBWD6-212ENST00000613125 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
CBWD6-212ENST00000613125 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
CBWD6-212ENST00000613125 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
CBWD6-212ENST00000613125 SMARCA4P51532 1647 aa11.06□□□□□ -0.64
CBWD6-212ENST00000613125 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
CBWD6-212ENST00000613125 CUX2O14529 1486 aa11.05□□□□□ -0.64
CBWD6-212ENST00000613125 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
CBWD6-212ENST00000613125 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
CBWD6-212ENST00000613125 BAZ1BQ9UIG0 1483 aaKnown RBP10.92□□□□□ -0.66
CBWD6-212ENST00000613125 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
CBWD6-212ENST00000613125 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
CBWD6-212ENST00000613125 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
CBWD6-212ENST00000613125 MROH2BQ7Z745 1585 aa10.79□□□□□ -0.68
CBWD6-212ENST00000613125 DNAJC5Q9H3Z4 198 aa10.79□□□□□ -0.68
CBWD6-212ENST00000613125 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
CBWD6-212ENST00000613125 WDR62O43379 1518 aa10.72□□□□□ -0.69
CBWD6-212ENST00000613125 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
CBWD6-212ENST00000613125 CADPSQ9ULU8 1353 aa10.71□□□□□ -0.69
CBWD6-212ENST00000613125 MRC2Q9UBG0 1479 aa10.7□□□□□ -0.7
CBWD6-212ENST00000613125 NESP48681 1621 aa10.7□□□□□ -0.7
CBWD6-212ENST00000613125 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
CBWD6-212ENST00000613125 WIZO95785 1651 aa10.66□□□□□ -0.7
CBWD6-212ENST00000613125 CFTRP13569 1480 aa10.64□□□□□ -0.71
CBWD6-212ENST00000613125 CEP164Q9UPV0 1460 aa10.64□□□□□ -0.71
CBWD6-212ENST00000613125 RSF1Q96T23 1441 aaPredicted RBP10.59□□□□□ -0.71
CBWD6-212ENST00000613125 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
CBWD6-212ENST00000613125 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
CBWD6-212ENST00000613125 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CBWD6-212ENST00000613125 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
CBWD6-212ENST00000613125 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.73
CBWD6-212ENST00000613125 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
CBWD6-212ENST00000613125 CCDC88BA6NC98 1476 aa10.42□□□□□ -0.74
CBWD6-212ENST00000613125 TOPBP1Q92547 1522 aa10.39□□□□□ -0.75
CBWD6-212ENST00000613125 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
CBWD6-212ENST00000613125 TARBP1Q13395 1621 aaKnown RBP10.34□□□□□ -0.75
CBWD6-212ENST00000613125 OSCARQ8IYS5 282 aa10.33□□□□□ -0.76
CBWD6-212ENST00000613125 RIMBP3CA6NJZ7 1639 aa10.26□□□□□ -0.77
CBWD6-212ENST00000613125 RIMBP3BA6NNM3 1639 aa10.26□□□□□ -0.77
CBWD6-212ENST00000613125 RIMBP3Q9UFD9 1639 aa10.26□□□□□ -0.77
CBWD6-212ENST00000613125 POLA1P09884 1462 aaPredicted RBP10.26□□□□□ -0.77
CBWD6-212ENST00000613125 MAGI1Q96QZ7 1491 aaPredicted RBP10.26□□□□□ -0.77
CBWD6-212ENST00000613125 CHD1O14646 1710 aa10.25□□□□□ -0.77
CBWD6-212ENST00000613125 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
CBWD6-212ENST00000613125 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
CBWD6-212ENST00000613125 ARHGEF11O15085 1522 aa10.22□□□□□ -0.77
CBWD6-212ENST00000613125 CLASP1Q7Z460 1538 aa10.2□□□□□ -0.78
CBWD6-212ENST00000613125 GRIN2BQ13224 1484 aa10.2□□□□□ -0.78
CBWD6-212ENST00000613125 FGD5Q6ZNL6 1462 aa10.19□□□□□ -0.78
CBWD6-212ENST00000613125 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
CBWD6-212ENST00000613125 SOGA1O94964 1423 aa10.19□□□□□ -0.78
CBWD6-212ENST00000613125 ABCA5Q8WWZ7 1642 aa10.18□□□□□ -0.78
CBWD6-212ENST00000613125 CUX1P39880 1505 aa10.18□□□□□ -0.78
CBWD6-212ENST00000613125 BIVM-ERCC5R4GMW8 1640 aa10.17□□□□□ -0.78
CBWD6-212ENST00000613125 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
CBWD6-212ENST00000613125 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
CBWD6-212ENST00000613125 SNAPC4Q5SXM2 1469 aa10.14□□□□□ -0.79
CBWD6-212ENST00000613125 AQRO60306 1485 aaKnown RBP eCLIP10.13□□□□□ -0.79
CBWD6-212ENST00000613125 TOP2BQ02880 1626 aa10.13□□□□□ -0.79
CBWD6-212ENST00000613125 TRIM41Q8WV44 630 aa10.11□□□□□ -0.79
CBWD6-212ENST00000613125 GAPVD1Q14C86 1478 aa10.1□□□□□ -0.79
CBWD6-212ENST00000613125 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
CBWD6-212ENST00000613125 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
CBWD6-212ENST00000613125 ARAP1Q96P48 1450 aa10.09□□□□□ -0.79
CBWD6-212ENST00000613125 ADAMTS12P58397 1594 aa10.09□□□□□ -0.79
CBWD6-212ENST00000613125 WRNQ14191 1432 aaPredicted RBP eCLIP10.08□□□□□ -0.8
CBWD6-212ENST00000613125 SHROOM2Q13796 1616 aa10.06□□□□□ -0.8
CBWD6-212ENST00000613125 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
CBWD6-212ENST00000613125 TDRD9Q8NDG6 1382 aaKnown RBP10.04□□□□□ -0.8
CBWD6-212ENST00000613125 NUP160Q12769 1436 aa10.04□□□□□ -0.8
CBWD6-212ENST00000613125 GRIN2AQ12879 1464 aa10.04□□□□□ -0.8
CBWD6-212ENST00000613125 FHAD1B1AJZ9 1412 aa10.03□□□□□ -0.8
CBWD6-212ENST00000613125 CHMP7Q8WUX9 453 aaPredicted RBP10.02□□□□□ -0.81
CBWD6-212ENST00000613125 CUL7Q14999 1698 aa10□□□□□ -0.81
CBWD6-212ENST00000613125 CEP170Q5SW79 1584 aa9.97□□□□□ -0.81
CBWD6-212ENST00000613125 SENP3Q9H4L4 574 aaPredicted RBP9.95□□□□□ -0.82
CBWD6-212ENST00000613125 FBLN2P98095 1184 aa9.94□□□□□ -0.82
CBWD6-212ENST00000613125 RUSC2Q8N2Y8 1516 aa9.94□□□□□ -0.82
CBWD6-212ENST00000613125 CYB5RLQ6IPT4 315 aa9.92□□□□□ -0.82
CBWD6-212ENST00000613125 MAPKBP1O60336 1514 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms