RNA–Protein interactions for RNA: ENST00000613023.1

RNVU1-19-201, Transcript of RNA, variant U1 small nuclear 19, humanhuman

BASIC

Gene RNVU1-19, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-19-201ENST00000613023 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
RNVU1-19-201ENST00000613023 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
RNVU1-19-201ENST00000613023 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
RNVU1-19-201ENST00000613023 ABCC9O60706 1549 aa15.73■□□□□ 0.11
RNVU1-19-201ENST00000613023 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
RNVU1-19-201ENST00000613023 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
RNVU1-19-201ENST00000613023 NACADO15069 1562 aa15.56■□□□□ 0.08
RNVU1-19-201ENST00000613023 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
RNVU1-19-201ENST00000613023 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
RNVU1-19-201ENST00000613023 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
RNVU1-19-201ENST00000613023 SCRIBQ14160 1630 aa15.07■□□□□ 0
RNVU1-19-201ENST00000613023 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
RNVU1-19-201ENST00000613023 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.01
RNVU1-19-201ENST00000613023 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
RNVU1-19-201ENST00000613023 BAZ1AQ9NRL2 1556 aaPredicted RBP14.59□□□□□ -0.07
RNVU1-19-201ENST00000613023 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
RNVU1-19-201ENST00000613023 CECR2Q9BXF3 1484 aa14.52□□□□□ -0.08
RNVU1-19-201ENST00000613023 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
RNVU1-19-201ENST00000613023 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
RNVU1-19-201ENST00000613023 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
RNVU1-19-201ENST00000613023 RSF1Q96T23 1441 aaPredicted RBP14.42□□□□□ -0.1
RNVU1-19-201ENST00000613023 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
RNVU1-19-201ENST00000613023 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
RNVU1-19-201ENST00000613023 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
RNVU1-19-201ENST00000613023 HMGXB3Q12766 1538 aa14.33□□□□□ -0.12
RNVU1-19-201ENST00000613023 WIZO95785 1651 aa14.33□□□□□ -0.12
RNVU1-19-201ENST00000613023 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
RNVU1-19-201ENST00000613023 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
RNVU1-19-201ENST00000613023 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
RNVU1-19-201ENST00000613023 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
RNVU1-19-201ENST00000613023 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
RNVU1-19-201ENST00000613023 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
RNVU1-19-201ENST00000613023 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
RNVU1-19-201ENST00000613023 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
RNVU1-19-201ENST00000613023 CFTRP13569 1480 aa13.9□□□□□ -0.18
RNVU1-19-201ENST00000613023 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
RNVU1-19-201ENST00000613023 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
RNVU1-19-201ENST00000613023 NESP48681 1621 aa13.72□□□□□ -0.21
RNVU1-19-201ENST00000613023 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
RNVU1-19-201ENST00000613023 KIF21AQ7Z4S6 1674 aa13.69□□□□□ -0.22
RNVU1-19-201ENST00000613023 CEP164Q9UPV0 1460 aa13.66□□□□□ -0.22
RNVU1-19-201ENST00000613023 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
RNVU1-19-201ENST00000613023 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
RNVU1-19-201ENST00000613023 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
RNVU1-19-201ENST00000613023 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
RNVU1-19-201ENST00000613023 WRNQ14191 1432 aaPredicted RBP eCLIP13.59□□□□□ -0.23
RNVU1-19-201ENST00000613023 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
RNVU1-19-201ENST00000613023 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
RNVU1-19-201ENST00000613023 WDR62O43379 1518 aa13.57□□□□□ -0.24
RNVU1-19-201ENST00000613023 CUX1P39880 1505 aa13.56□□□□□ -0.24
RNVU1-19-201ENST00000613023 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
RNVU1-19-201ENST00000613023 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
RNVU1-19-201ENST00000613023 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
RNVU1-19-201ENST00000613023 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
RNVU1-19-201ENST00000613023 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
RNVU1-19-201ENST00000613023 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
RNVU1-19-201ENST00000613023 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
RNVU1-19-201ENST00000613023 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
RNVU1-19-201ENST00000613023 CUX2O14529 1486 aa13.41□□□□□ -0.26
RNVU1-19-201ENST00000613023 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
RNVU1-19-201ENST00000613023 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
RNVU1-19-201ENST00000613023 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
RNVU1-19-201ENST00000613023 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
RNVU1-19-201ENST00000613023 EEA1Q15075 1411 aa13.36□□□□□ -0.27
RNVU1-19-201ENST00000613023 SOGA1O94964 1423 aa13.35□□□□□ -0.27
RNVU1-19-201ENST00000613023 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
RNVU1-19-201ENST00000613023 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
RNVU1-19-201ENST00000613023 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
RNVU1-19-201ENST00000613023 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
RNVU1-19-201ENST00000613023 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
RNVU1-19-201ENST00000613023 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
RNVU1-19-201ENST00000613023 CUL7Q14999 1698 aa13.24□□□□□ -0.29
RNVU1-19-201ENST00000613023 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
RNVU1-19-201ENST00000613023 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
RNVU1-19-201ENST00000613023 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
RNVU1-19-201ENST00000613023 KIF21BO75037 1637 aa13.19□□□□□ -0.3
RNVU1-19-201ENST00000613023 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
RNVU1-19-201ENST00000613023 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
RNVU1-19-201ENST00000613023 IGF1RP08069 1367 aa13.16□□□□□ -0.3
RNVU1-19-201ENST00000613023 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
RNVU1-19-201ENST00000613023 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
RNVU1-19-201ENST00000613023 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
RNVU1-19-201ENST00000613023 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
RNVU1-19-201ENST00000613023 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
RNVU1-19-201ENST00000613023 FHAD1B1AJZ9 1412 aa13.12□□□□□ -0.31
RNVU1-19-201ENST00000613023 SNAPC4Q5SXM2 1469 aa13.09□□□□□ -0.31
RNVU1-19-201ENST00000613023 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
RNVU1-19-201ENST00000613023 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
RNVU1-19-201ENST00000613023 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
RNVU1-19-201ENST00000613023 GOLGA3Q08378 1498 aa13.07□□□□□ -0.32
RNVU1-19-201ENST00000613023 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
RNVU1-19-201ENST00000613023 GRIN2AQ12879 1464 aa13.03□□□□□ -0.32
RNVU1-19-201ENST00000613023 CHD1O14646 1710 aa13.02□□□□□ -0.32
RNVU1-19-201ENST00000613023 FAM9AQ8IZU1 332 aaPredicted RBP12.99□□□□□ -0.33
RNVU1-19-201ENST00000613023 NUP160Q12769 1436 aa12.98□□□□□ -0.33
RNVU1-19-201ENST00000613023 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
RNVU1-19-201ENST00000613023 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
RNVU1-19-201ENST00000613023 KIAA0586Q9BVV6 1533 aa12.93□□□□□ -0.34
RNVU1-19-201ENST00000613023 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
RNVU1-19-201ENST00000613023 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms