RNA–Protein interactions for RNA: ENST00000611973.4

SLC3A1-210, Transcript of solute carrier family 3 member 1, humanhuman

TSL 5 BASIC

Gene SLC3A1, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-210ENST00000611973 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
SLC3A1-210ENST00000611973 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.98
SLC3A1-210ENST00000611973 ABCC9O60706 1549 aa21.04■□□□□ 0.96
SLC3A1-210ENST00000611973 AEBP2Q6ZN18 517 aaPredicted RBP21.03■□□□□ 0.96
SLC3A1-210ENST00000611973 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
SLC3A1-210ENST00000611973 RB1CC1Q8TDY2 1594 aa20.03■□□□□ 0.8
SLC3A1-210ENST00000611973 NACADO15069 1562 aa19.94■□□□□ 0.78
SLC3A1-210ENST00000611973 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
SLC3A1-210ENST00000611973 CHIC1Q5VXU3 224 aa19.69■□□□□ 0.74
SLC3A1-210ENST00000611973 PABPN1Q86U42 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
SLC3A1-210ENST00000611973 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
SLC3A1-210ENST00000611973 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
SLC3A1-210ENST00000611973 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
SLC3A1-210ENST00000611973 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
SLC3A1-210ENST00000611973 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
SLC3A1-210ENST00000611973 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
SLC3A1-210ENST00000611973 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
SLC3A1-210ENST00000611973 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
SLC3A1-210ENST00000611973 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
SLC3A1-210ENST00000611973 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
SLC3A1-210ENST00000611973 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
SLC3A1-210ENST00000611973 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
SLC3A1-210ENST00000611973 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
SLC3A1-210ENST00000611973 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
SLC3A1-210ENST00000611973 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
SLC3A1-210ENST00000611973 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
SLC3A1-210ENST00000611973 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
SLC3A1-210ENST00000611973 HMGXB3Q12766 1538 aa18.29■□□□□ 0.52
SLC3A1-210ENST00000611973 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
SLC3A1-210ENST00000611973 WIZO95785 1651 aa18.21■□□□□ 0.51
SLC3A1-210ENST00000611973 NESP48681 1621 aa18.16■□□□□ 0.5
SLC3A1-210ENST00000611973 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
SLC3A1-210ENST00000611973 ERCC6Q03468 1493 aa18.1■□□□□ 0.49
SLC3A1-210ENST00000611973 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
SLC3A1-210ENST00000611973 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
SLC3A1-210ENST00000611973 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
SLC3A1-210ENST00000611973 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
SLC3A1-210ENST00000611973 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
SLC3A1-210ENST00000611973 CUX2O14529 1486 aa17.86■□□□□ 0.45
SLC3A1-210ENST00000611973 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
SLC3A1-210ENST00000611973 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
SLC3A1-210ENST00000611973 CCDC88BA6NC98 1476 aa17.77■□□□□ 0.44
SLC3A1-210ENST00000611973 CFTRP13569 1480 aa17.75■□□□□ 0.43
SLC3A1-210ENST00000611973 FANCD2Q9BXW9 1451 aa17.74■□□□□ 0.43
SLC3A1-210ENST00000611973 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
SLC3A1-210ENST00000611973 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
SLC3A1-210ENST00000611973 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
SLC3A1-210ENST00000611973 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
SLC3A1-210ENST00000611973 WDR62O43379 1518 aa17.63■□□□□ 0.41
SLC3A1-210ENST00000611973 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.41
SLC3A1-210ENST00000611973 URB2Q14146 1524 aaKnown RBP17.58■□□□□ 0.4
SLC3A1-210ENST00000611973 PRDM2Q13029 1718 aa17.58■□□□□ 0.4
SLC3A1-210ENST00000611973 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
SLC3A1-210ENST00000611973 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
SLC3A1-210ENST00000611973 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
SLC3A1-210ENST00000611973 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
SLC3A1-210ENST00000611973 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
SLC3A1-210ENST00000611973 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
SLC3A1-210ENST00000611973 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
SLC3A1-210ENST00000611973 CUX1P39880 1505 aa17.26■□□□□ 0.35
SLC3A1-210ENST00000611973 AQRO60306 1485 aaKnown RBP eCLIP17.24■□□□□ 0.35
SLC3A1-210ENST00000611973 TARBP1Q13395 1621 aaKnown RBP17.23■□□□□ 0.35
SLC3A1-210ENST00000611973 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
SLC3A1-210ENST00000611973 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
SLC3A1-210ENST00000611973 SOGA1O94964 1423 aa17.21■□□□□ 0.35
SLC3A1-210ENST00000611973 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
SLC3A1-210ENST00000611973 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
SLC3A1-210ENST00000611973 FBLN2P98095 1184 aa17.12■□□□□ 0.33
SLC3A1-210ENST00000611973 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
SLC3A1-210ENST00000611973 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
SLC3A1-210ENST00000611973 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SLC3A1-210ENST00000611973 CHD1O14646 1710 aa17.06■□□□□ 0.32
SLC3A1-210ENST00000611973 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
SLC3A1-210ENST00000611973 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
SLC3A1-210ENST00000611973 TOP2BQ02880 1626 aa17.02■□□□□ 0.31
SLC3A1-210ENST00000611973 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
SLC3A1-210ENST00000611973 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
SLC3A1-210ENST00000611973 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
SLC3A1-210ENST00000611973 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
SLC3A1-210ENST00000611973 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
SLC3A1-210ENST00000611973 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
SLC3A1-210ENST00000611973 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
SLC3A1-210ENST00000611973 RIMBP3CA6NJZ7 1639 aa16.93■□□□□ 0.3
SLC3A1-210ENST00000611973 RIMBP3BA6NNM3 1639 aa16.93■□□□□ 0.3
SLC3A1-210ENST00000611973 RIMBP3Q9UFD9 1639 aa16.93■□□□□ 0.3
SLC3A1-210ENST00000611973 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
SLC3A1-210ENST00000611973 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
SLC3A1-210ENST00000611973 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
SLC3A1-210ENST00000611973 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
SLC3A1-210ENST00000611973 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
SLC3A1-210ENST00000611973 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
SLC3A1-210ENST00000611973 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
SLC3A1-210ENST00000611973 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.27
SLC3A1-210ENST00000611973 ARAP1Q96P48 1450 aa16.77■□□□□ 0.27
SLC3A1-210ENST00000611973 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
SLC3A1-210ENST00000611973 FOXD1Q16676 465 aa16.76■□□□□ 0.27
SLC3A1-210ENST00000611973 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
SLC3A1-210ENST00000611973 KIF27Q86VH2 1401 aa16.71■□□□□ 0.26
SLC3A1-210ENST00000611973 NUP160Q12769 1436 aa16.69■□□□□ 0.26
SLC3A1-210ENST00000611973 IGF1RP08069 1367 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms