RNA–Protein interactions for RNA: ENST00000611387.1

PACRG-210, Transcript of parkin coregulated, humanhuman

TSL 5 BASIC

Gene PACRG, Length 279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-210ENST00000611387 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
PACRG-210ENST00000611387 AEBP2Q6ZN18 517 aaPredicted RBP12.45□□□□□ -0.42
PACRG-210ENST00000611387 ABCC9O60706 1549 aa12.42□□□□□ -0.42
PACRG-210ENST00000611387 CHIC1Q5VXU3 224 aa12.25□□□□□ -0.45
PACRG-210ENST00000611387 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
PACRG-210ENST00000611387 CCDC180Q9P1Z9 1646 aa11.95□□□□□ -0.5
PACRG-210ENST00000611387 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
PACRG-210ENST00000611387 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
PACRG-210ENST00000611387 RB1CC1Q8TDY2 1594 aa11.47□□□□□ -0.57
PACRG-210ENST00000611387 NACADO15069 1562 aa11.31□□□□□ -0.6
PACRG-210ENST00000611387 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
PACRG-210ENST00000611387 BICRAQ9NZM4 1560 aa11.22□□□□□ -0.61
PACRG-210ENST00000611387 CECR2Q9BXF3 1484 aa11.18□□□□□ -0.62
PACRG-210ENST00000611387 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
PACRG-210ENST00000611387 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
PACRG-210ENST00000611387 MYO15BQ96JP2 1530 aa11.09□□□□□ -0.63
PACRG-210ENST00000611387 SHROOM4Q9ULL8 1493 aa11.03□□□□□ -0.64
PACRG-210ENST00000611387 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
PACRG-210ENST00000611387 TRIM41Q8WV44 630 aa10.86□□□□□ -0.67
PACRG-210ENST00000611387 DCAF1Q9Y4B6 1507 aa10.81□□□□□ -0.68
PACRG-210ENST00000611387 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
PACRG-210ENST00000611387 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
PACRG-210ENST00000611387 PHF23Q9BUL5 403 aaPredicted RBP10.78□□□□□ -0.68
PACRG-210ENST00000611387 CUX2O14529 1486 aa10.77□□□□□ -0.69
PACRG-210ENST00000611387 ERCC6Q03468 1493 aa10.66□□□□□ -0.7
PACRG-210ENST00000611387 SENP3Q9H4L4 574 aaPredicted RBP10.56□□□□□ -0.72
PACRG-210ENST00000611387 NESP48681 1621 aa10.54□□□□□ -0.72
PACRG-210ENST00000611387 THOC2Q8NI27 1593 aaKnown RBP10.45□□□□□ -0.74
PACRG-210ENST00000611387 NCAPD3P42695 1498 aa10.43□□□□□ -0.74
PACRG-210ENST00000611387 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
PACRG-210ENST00000611387 HMGXB3Q12766 1538 aa10.38□□□□□ -0.75
PACRG-210ENST00000611387 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
PACRG-210ENST00000611387 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
PACRG-210ENST00000611387 SMARCA4P51532 1647 aa10.29□□□□□ -0.76
PACRG-210ENST00000611387 LAMC3Q9Y6N6 1575 aa10.28□□□□□ -0.76
PACRG-210ENST00000611387 BAZ1AQ9NRL2 1556 aaPredicted RBP10.27□□□□□ -0.76
PACRG-210ENST00000611387 PEG3Q9GZU2 1588 aa10.23□□□□□ -0.77
PACRG-210ENST00000611387 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
PACRG-210ENST00000611387 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
PACRG-210ENST00000611387 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
PACRG-210ENST00000611387 OSCARQ8IYS5 282 aa10.21□□□□□ -0.77
PACRG-210ENST00000611387 BAZ1BQ9UIG0 1483 aaKnown RBP10.21□□□□□ -0.78
PACRG-210ENST00000611387 WDR62O43379 1518 aa10.18□□□□□ -0.78
PACRG-210ENST00000611387 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
PACRG-210ENST00000611387 PDS5BQ9NTI5 1447 aa10.15□□□□□ -0.79
PACRG-210ENST00000611387 MRC2Q9UBG0 1479 aa10.14□□□□□ -0.79
PACRG-210ENST00000611387 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
PACRG-210ENST00000611387 CYB5RLQ6IPT4 315 aa10.11□□□□□ -0.79
PACRG-210ENST00000611387 MROH2BQ7Z745 1585 aa10.05□□□□□ -0.8
PACRG-210ENST00000611387 CADPSQ9ULU8 1353 aa10.05□□□□□ -0.8
PACRG-210ENST00000611387 ARAP1Q96P48 1450 aa10.02□□□□□ -0.81
PACRG-210ENST00000611387 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.81
PACRG-210ENST00000611387 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
PACRG-210ENST00000611387 PLPPR3Q6T4P5 718 aa9.99□□□□□ -0.81
PACRG-210ENST00000611387 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
PACRG-210ENST00000611387 ZNF608Q9ULD9 1512 aaPredicted RBP9.97□□□□□ -0.81
PACRG-210ENST00000611387 URB2Q14146 1524 aaKnown RBP9.95□□□□□ -0.82
PACRG-210ENST00000611387 WIZO95785 1651 aa9.93□□□□□ -0.82
PACRG-210ENST00000611387 CFTRP13569 1480 aa9.92□□□□□ -0.82
PACRG-210ENST00000611387 SUPT5HO00267 1087 aaKnown RBP9.91□□□□□ -0.82
PACRG-210ENST00000611387 PRDM2Q13029 1718 aa9.86□□□□□ -0.83
PACRG-210ENST00000611387 CHD1O14646 1710 aa9.85□□□□□ -0.83
PACRG-210ENST00000611387 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
PACRG-210ENST00000611387 IFT140Q96RY7 1462 aa9.82□□□□□ -0.84
PACRG-210ENST00000611387 FBLN2P98095 1184 aa9.81□□□□□ -0.84
PACRG-210ENST00000611387 TOP2AP11388 1531 aaKnown RBP9.78□□□□□ -0.84
PACRG-210ENST00000611387 FOXD1Q16676 465 aa9.78□□□□□ -0.84
PACRG-210ENST00000611387 RSF1Q96T23 1441 aaPredicted RBP9.78□□□□□ -0.84
PACRG-210ENST00000611387 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
PACRG-210ENST00000611387 TOPBP1Q92547 1522 aa9.76□□□□□ -0.85
PACRG-210ENST00000611387 TARBP1Q13395 1621 aaKnown RBP9.75□□□□□ -0.85
PACRG-210ENST00000611387 CLASP1Q7Z460 1538 aa9.73□□□□□ -0.85
PACRG-210ENST00000611387 DNMBPQ6XZF7 1577 aa9.71□□□□□ -0.85
PACRG-210ENST00000611387 KDM4FA0A1W2PPD8 638 aa9.71□□□□□ -0.86
PACRG-210ENST00000611387 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
PACRG-210ENST00000611387 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
PACRG-210ENST00000611387 GAPVD1Q14C86 1478 aa9.65□□□□□ -0.87
PACRG-210ENST00000611387 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
PACRG-210ENST00000611387 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
PACRG-210ENST00000611387 TDRD9Q8NDG6 1382 aaKnown RBP9.63□□□□□ -0.87
PACRG-210ENST00000611387 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
PACRG-210ENST00000611387 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
PACRG-210ENST00000611387 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
PACRG-210ENST00000611387 SYNJ1O43426 1573 aa9.62□□□□□ -0.87
PACRG-210ENST00000611387 KIF13AQ9H1H9 1805 aa9.61□□□□□ -0.87
PACRG-210ENST00000611387 CHMP7Q8WUX9 453 aaPredicted RBP9.57□□□□□ -0.88
PACRG-210ENST00000611387 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
PACRG-210ENST00000611387 SYNJ2O15056 1496 aa9.54□□□□□ -0.88
PACRG-210ENST00000611387 PBRM1Q86U86 1689 aa9.53□□□□□ -0.88
PACRG-210ENST00000611387 FGD5Q6ZNL6 1462 aa9.52□□□□□ -0.89
PACRG-210ENST00000611387 HECW2Q9P2P5 1572 aa9.51□□□□□ -0.89
PACRG-210ENST00000611387 GRIN2BQ13224 1484 aa9.51□□□□□ -0.89
PACRG-210ENST00000611387 SOGA1O94964 1423 aa9.5□□□□□ -0.89
PACRG-210ENST00000611387 ADRA2BP18089 450 aa9.48□□□□□ -0.89
PACRG-210ENST00000611387 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
PACRG-210ENST00000611387 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
PACRG-210ENST00000611387 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
PACRG-210ENST00000611387 CUX1P39880 1505 aa9.47□□□□□ -0.89
PACRG-210ENST00000611387 SHROOM2Q13796 1616 aa9.47□□□□□ -0.89
PACRG-210ENST00000611387 CEP170Q5SW79 1584 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms