RNA–Protein interactions for RNA: ENST00000610805.4

DDB2-205, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-205ENST00000610805 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
DDB2-205ENST00000610805 CCDC180Q9P1Z9 1646 aa25.58■■□□□ 1.69
DDB2-205ENST00000610805 ABCC9O60706 1549 aa25.12■■□□□ 1.61
DDB2-205ENST00000610805 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
DDB2-205ENST00000610805 RB1CC1Q8TDY2 1594 aa24.04■■□□□ 1.44
DDB2-205ENST00000610805 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
DDB2-205ENST00000610805 NACADO15069 1562 aa24■■□□□ 1.43
DDB2-205ENST00000610805 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
DDB2-205ENST00000610805 DCAF1Q9Y4B6 1507 aa23.74■■□□□ 1.39
DDB2-205ENST00000610805 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
DDB2-205ENST00000610805 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
DDB2-205ENST00000610805 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
DDB2-205ENST00000610805 BICRAQ9NZM4 1560 aa23.46■■□□□ 1.35
DDB2-205ENST00000610805 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
DDB2-205ENST00000610805 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
DDB2-205ENST00000610805 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
DDB2-205ENST00000610805 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
DDB2-205ENST00000610805 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
DDB2-205ENST00000610805 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
DDB2-205ENST00000610805 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
DDB2-205ENST00000610805 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
DDB2-205ENST00000610805 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
DDB2-205ENST00000610805 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
DDB2-205ENST00000610805 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
DDB2-205ENST00000610805 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
DDB2-205ENST00000610805 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
DDB2-205ENST00000610805 WIZO95785 1651 aa22.07■■□□□ 1.12
DDB2-205ENST00000610805 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
DDB2-205ENST00000610805 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
DDB2-205ENST00000610805 NESP48681 1621 aa21.79■■□□□ 1.08
DDB2-205ENST00000610805 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
DDB2-205ENST00000610805 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
DDB2-205ENST00000610805 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
DDB2-205ENST00000610805 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
DDB2-205ENST00000610805 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
DDB2-205ENST00000610805 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
DDB2-205ENST00000610805 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
DDB2-205ENST00000610805 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
DDB2-205ENST00000610805 CFTRP13569 1480 aa21.41■■□□□ 1.02
DDB2-205ENST00000610805 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
DDB2-205ENST00000610805 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
DDB2-205ENST00000610805 PRDM2Q13029 1718 aa21.29■■□□□ 1
DDB2-205ENST00000610805 CUX2O14529 1486 aa21.28■■□□□ 1
DDB2-205ENST00000610805 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
DDB2-205ENST00000610805 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
DDB2-205ENST00000610805 WDR62O43379 1518 aa21.19■□□□□ 0.98
DDB2-205ENST00000610805 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
DDB2-205ENST00000610805 TOPBP1Q92547 1522 aa21■□□□□ 0.95
DDB2-205ENST00000610805 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
DDB2-205ENST00000610805 CUX1P39880 1505 aa20.89■□□□□ 0.94
DDB2-205ENST00000610805 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
DDB2-205ENST00000610805 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
DDB2-205ENST00000610805 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
DDB2-205ENST00000610805 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
DDB2-205ENST00000610805 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
DDB2-205ENST00000610805 TARBP1Q13395 1621 aaKnown RBP20.79■□□□□ 0.92
DDB2-205ENST00000610805 FGD5Q6ZNL6 1462 aa20.79■□□□□ 0.92
DDB2-205ENST00000610805 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
DDB2-205ENST00000610805 EIF4G3O43432 1585 aaKnown RBP20.73■□□□□ 0.91
DDB2-205ENST00000610805 SOGA1O94964 1423 aa20.69■□□□□ 0.9
DDB2-205ENST00000610805 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
DDB2-205ENST00000610805 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.93e-7■■■■■ 36.6
DDB2-205ENST00000610805 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
DDB2-205ENST00000610805 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
DDB2-205ENST00000610805 TOP2BQ02880 1626 aa20.66■□□□□ 0.9
DDB2-205ENST00000610805 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
DDB2-205ENST00000610805 DNAJC5Q9H3Z4 198 aa20.63■□□□□ 0.89
DDB2-205ENST00000610805 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
DDB2-205ENST00000610805 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
DDB2-205ENST00000610805 CHD1O14646 1710 aa20.5■□□□□ 0.87
DDB2-205ENST00000610805 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
DDB2-205ENST00000610805 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
DDB2-205ENST00000610805 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
DDB2-205ENST00000610805 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
DDB2-205ENST00000610805 FBLN2P98095 1184 aa20.37■□□□□ 0.85
DDB2-205ENST00000610805 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
DDB2-205ENST00000610805 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
DDB2-205ENST00000610805 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
DDB2-205ENST00000610805 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
DDB2-205ENST00000610805 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
DDB2-205ENST00000610805 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
DDB2-205ENST00000610805 CLASP1Q7Z460 1538 aa20.22■□□□□ 0.83
DDB2-205ENST00000610805 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
DDB2-205ENST00000610805 GRIN2AQ12879 1464 aa20.21■□□□□ 0.83
DDB2-205ENST00000610805 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
DDB2-205ENST00000610805 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
DDB2-205ENST00000610805 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
DDB2-205ENST00000610805 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
DDB2-205ENST00000610805 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
DDB2-205ENST00000610805 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
DDB2-205ENST00000610805 IGF1RP08069 1367 aa20.17■□□□□ 0.82
DDB2-205ENST00000610805 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
DDB2-205ENST00000610805 TRIM41Q8WV44 630 aa20.16■□□□□ 0.82
DDB2-205ENST00000610805 NUP160Q12769 1436 aa20.11■□□□□ 0.81
DDB2-205ENST00000610805 CUL7Q14999 1698 aa20.1■□□□□ 0.81
DDB2-205ENST00000610805 ERCC6L2Q5T890 1561 aa20.06■□□□□ 0.8
DDB2-205ENST00000610805 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
DDB2-205ENST00000610805 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
DDB2-205ENST00000610805 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
DDB2-205ENST00000610805 SHROOM2Q13796 1616 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms