RNA–Protein interactions for RNA: ENST00000610649.4

PMPCA-206, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 5

Gene PMPCA, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-206ENST00000610649 NISCHQ9Y2I1 1504 aa19.29■□□□□ 0.68
PMPCA-206ENST00000610649 ABCC9O60706 1549 aa17.57■□□□□ 0.4
PMPCA-206ENST00000610649 CCDC180Q9P1Z9 1646 aa17.18■□□□□ 0.34
PMPCA-206ENST00000610649 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
PMPCA-206ENST00000610649 RB1CC1Q8TDY2 1594 aa16.48■□□□□ 0.23
PMPCA-206ENST00000610649 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
PMPCA-206ENST00000610649 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
PMPCA-206ENST00000610649 NACADO15069 1562 aa16.35■□□□□ 0.21
PMPCA-206ENST00000610649 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
PMPCA-206ENST00000610649 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
PMPCA-206ENST00000610649 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PMPCA-206ENST00000610649 ZCCHC6Q5VYS8 1495 aaKnown RBP15.96■□□□□ 0.14
PMPCA-206ENST00000610649 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
PMPCA-206ENST00000610649 CECR2Q9BXF3 1484 aa15.8■□□□□ 0.12
PMPCA-206ENST00000610649 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
PMPCA-206ENST00000610649 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
PMPCA-206ENST00000610649 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
PMPCA-206ENST00000610649 EIF4G1Q04637 1599 aaKnown RBP15.72■□□□□ 0.11
PMPCA-206ENST00000610649 DNAJC5Q9H3Z4 198 aa15.38■□□□□ 0.05
PMPCA-206ENST00000610649 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
PMPCA-206ENST00000610649 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
PMPCA-206ENST00000610649 NESP48681 1621 aa15.1■□□□□ 0.01
PMPCA-206ENST00000610649 CUX2O14529 1486 aa15.08■□□□□ 0.01
PMPCA-206ENST00000610649 ERCC6Q03468 1493 aa15.07■□□□□ 0
PMPCA-206ENST00000610649 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
PMPCA-206ENST00000610649 SMARCA4P51532 1647 aa15.03■□□□□ -0
PMPCA-206ENST00000610649 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
PMPCA-206ENST00000610649 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
PMPCA-206ENST00000610649 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
PMPCA-206ENST00000610649 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
PMPCA-206ENST00000610649 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
PMPCA-206ENST00000610649 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
PMPCA-206ENST00000610649 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
PMPCA-206ENST00000610649 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.05
PMPCA-206ENST00000610649 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
PMPCA-206ENST00000610649 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
PMPCA-206ENST00000610649 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
PMPCA-206ENST00000610649 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
PMPCA-206ENST00000610649 WIZO95785 1651 aa14.67□□□□□ -0.06
PMPCA-206ENST00000610649 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
PMPCA-206ENST00000610649 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
PMPCA-206ENST00000610649 WDR62O43379 1518 aa14.61□□□□□ -0.07
PMPCA-206ENST00000610649 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
PMPCA-206ENST00000610649 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
PMPCA-206ENST00000610649 CFTRP13569 1480 aa14.54□□□□□ -0.08
PMPCA-206ENST00000610649 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
PMPCA-206ENST00000610649 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
PMPCA-206ENST00000610649 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
PMPCA-206ENST00000610649 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
PMPCA-206ENST00000610649 ZNF608Q9ULD9 1512 aaPredicted RBP14.39□□□□□ -0.11
PMPCA-206ENST00000610649 CCDC88BA6NC98 1476 aa14.37□□□□□ -0.11
PMPCA-206ENST00000610649 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
PMPCA-206ENST00000610649 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
PMPCA-206ENST00000610649 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
PMPCA-206ENST00000610649 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
PMPCA-206ENST00000610649 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
PMPCA-206ENST00000610649 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.137e-8■■■□□ 17.6
PMPCA-206ENST00000610649 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
PMPCA-206ENST00000610649 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
PMPCA-206ENST00000610649 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
PMPCA-206ENST00000610649 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
PMPCA-206ENST00000610649 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
PMPCA-206ENST00000610649 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
PMPCA-206ENST00000610649 TARBP1Q13395 1621 aaKnown RBP14.13□□□□□ -0.15
PMPCA-206ENST00000610649 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
PMPCA-206ENST00000610649 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
PMPCA-206ENST00000610649 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
PMPCA-206ENST00000610649 FBLN2P98095 1184 aa14.1□□□□□ -0.15
PMPCA-206ENST00000610649 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
PMPCA-206ENST00000610649 SOGA1O94964 1423 aa14.06□□□□□ -0.16
PMPCA-206ENST00000610649 CHD1O14646 1710 aa14.02□□□□□ -0.16
PMPCA-206ENST00000610649 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
PMPCA-206ENST00000610649 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
PMPCA-206ENST00000610649 CUX1P39880 1505 aa14□□□□□ -0.17
PMPCA-206ENST00000610649 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
PMPCA-206ENST00000610649 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
PMPCA-206ENST00000610649 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
PMPCA-206ENST00000610649 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
PMPCA-206ENST00000610649 MAGI1Q96QZ7 1491 aaPredicted RBP13.89□□□□□ -0.19
PMPCA-206ENST00000610649 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
PMPCA-206ENST00000610649 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
PMPCA-206ENST00000610649 SYNJ1O43426 1573 aa13.83□□□□□ -0.19
PMPCA-206ENST00000610649 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
PMPCA-206ENST00000610649 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
PMPCA-206ENST00000610649 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
PMPCA-206ENST00000610649 SUPT5HO00267 1087 aaKnown RBP13.82□□□□□ -0.2
PMPCA-206ENST00000610649 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
PMPCA-206ENST00000610649 GRIN2AQ12879 1464 aa13.74□□□□□ -0.21
PMPCA-206ENST00000610649 NUP160Q12769 1436 aa13.74□□□□□ -0.21
PMPCA-206ENST00000610649 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
PMPCA-206ENST00000610649 CEP170Q5SW79 1584 aa13.73□□□□□ -0.21
PMPCA-206ENST00000610649 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
PMPCA-206ENST00000610649 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
PMPCA-206ENST00000610649 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
PMPCA-206ENST00000610649 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
PMPCA-206ENST00000610649 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
PMPCA-206ENST00000610649 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
PMPCA-206ENST00000610649 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
PMPCA-206ENST00000610649 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
PMPCA-206ENST00000610649 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms