RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
LINC01278-206ENST00000610088 ABCC9O60706 1549 aa30.65■■■□□ 2.5
LINC01278-206ENST00000610088 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
LINC01278-206ENST00000610088 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
LINC01278-206ENST00000610088 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
LINC01278-206ENST00000610088 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
LINC01278-206ENST00000610088 NACADO15069 1562 aa28.14■■■□□ 2.1
LINC01278-206ENST00000610088 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
LINC01278-206ENST00000610088 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
LINC01278-206ENST00000610088 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.05
LINC01278-206ENST00000610088 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
LINC01278-206ENST00000610088 CECR2Q9BXF3 1484 aa27.69■■■□□ 2.02
LINC01278-206ENST00000610088 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
LINC01278-206ENST00000610088 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
LINC01278-206ENST00000610088 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
LINC01278-206ENST00000610088 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
LINC01278-206ENST00000610088 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
LINC01278-206ENST00000610088 CUX2O14529 1486 aa26.74■■□□□ 1.87
LINC01278-206ENST00000610088 ZCCHC6Q5VYS8 1495 aaKnown RBP26.63■■□□□ 1.85
LINC01278-206ENST00000610088 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
LINC01278-206ENST00000610088 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
LINC01278-206ENST00000610088 TRIM41Q8WV44 630 aa26.47■■□□□ 1.83
LINC01278-206ENST00000610088 NESP48681 1621 aa26.02■■□□□ 1.76
LINC01278-206ENST00000610088 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
LINC01278-206ENST00000610088 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
LINC01278-206ENST00000610088 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
LINC01278-206ENST00000610088 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
LINC01278-206ENST00000610088 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
LINC01278-206ENST00000610088 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
LINC01278-206ENST00000610088 KIF21AQ7Z4S6 1674 aa25.56■■□□□ 1.68
LINC01278-206ENST00000610088 BAZ1BQ9UIG0 1483 aaKnown RBP25.54■■□□□ 1.68
LINC01278-206ENST00000610088 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
LINC01278-206ENST00000610088 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
LINC01278-206ENST00000610088 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
LINC01278-206ENST00000610088 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
LINC01278-206ENST00000610088 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
LINC01278-206ENST00000610088 WDR62O43379 1518 aa25.28■■□□□ 1.64
LINC01278-206ENST00000610088 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
LINC01278-206ENST00000610088 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
LINC01278-206ENST00000610088 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
LINC01278-206ENST00000610088 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
LINC01278-206ENST00000610088 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
LINC01278-206ENST00000610088 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
LINC01278-206ENST00000610088 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
LINC01278-206ENST00000610088 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
LINC01278-206ENST00000610088 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
LINC01278-206ENST00000610088 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
LINC01278-206ENST00000610088 CYB5RLQ6IPT4 315 aa24.98■■□□□ 1.59
LINC01278-206ENST00000610088 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
LINC01278-206ENST00000610088 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
LINC01278-206ENST00000610088 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
LINC01278-206ENST00000610088 CFTRP13569 1480 aa24.68■■□□□ 1.54
LINC01278-206ENST00000610088 ARAP1Q96P48 1450 aa24.67■■□□□ 1.54
LINC01278-206ENST00000610088 WIZO95785 1651 aa24.65■■□□□ 1.54
LINC01278-206ENST00000610088 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
LINC01278-206ENST00000610088 FBLN2P98095 1184 aa24.53■■□□□ 1.52
LINC01278-206ENST00000610088 RSF1Q96T23 1441 aaPredicted RBP24.45■■□□□ 1.51
LINC01278-206ENST00000610088 EIF4G3O43432 1585 aaKnown RBP24.44■■□□□ 1.5
LINC01278-206ENST00000610088 CHD1O14646 1710 aa24.44■■□□□ 1.5
LINC01278-206ENST00000610088 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.49
LINC01278-206ENST00000610088 TOPBP1Q92547 1522 aa24.35■■□□□ 1.49
LINC01278-206ENST00000610088 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
LINC01278-206ENST00000610088 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
LINC01278-206ENST00000610088 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
LINC01278-206ENST00000610088 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
LINC01278-206ENST00000610088 ILDR1Q86SU0 546 aaPredicted RBP24.14■■□□□ 1.45
LINC01278-206ENST00000610088 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
LINC01278-206ENST00000610088 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
LINC01278-206ENST00000610088 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
LINC01278-206ENST00000610088 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
LINC01278-206ENST00000610088 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
LINC01278-206ENST00000610088 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
LINC01278-206ENST00000610088 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
LINC01278-206ENST00000610088 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
LINC01278-206ENST00000610088 POLA1P09884 1462 aaPredicted RBP24.02■■□□□ 1.44
LINC01278-206ENST00000610088 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
LINC01278-206ENST00000610088 SOGA1O94964 1423 aa23.94■■□□□ 1.42
LINC01278-206ENST00000610088 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
LINC01278-206ENST00000610088 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
LINC01278-206ENST00000610088 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
LINC01278-206ENST00000610088 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
LINC01278-206ENST00000610088 KDM4FA0A1W2PPD8 638 aa23.76■■□□□ 1.39
LINC01278-206ENST00000610088 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
LINC01278-206ENST00000610088 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
LINC01278-206ENST00000610088 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
LINC01278-206ENST00000610088 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
LINC01278-206ENST00000610088 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
LINC01278-206ENST00000610088 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
LINC01278-206ENST00000610088 CUX1P39880 1505 aa23.55■■□□□ 1.36
LINC01278-206ENST00000610088 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
LINC01278-206ENST00000610088 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
LINC01278-206ENST00000610088 KDM6BO15054 1643 aa23.47■■□□□ 1.35
LINC01278-206ENST00000610088 NPM1P06748 294 aaKnown RBP eCLIP23.46■■□□□ 1.35
LINC01278-206ENST00000610088 NUP160Q12769 1436 aa23.44■■□□□ 1.34
LINC01278-206ENST00000610088 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
LINC01278-206ENST00000610088 SHROOM2Q13796 1616 aa23.4■■□□□ 1.34
LINC01278-206ENST00000610088 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
LINC01278-206ENST00000610088 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
LINC01278-206ENST00000610088 DIP2BQ9P265 1576 aa23.36■■□□□ 1.33
LINC01278-206ENST00000610088 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms