RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
LINC01396-201ENST00000609099 NISCHQ9Y2I1 1504 aa21.77■■□□□ 1.08
LINC01396-201ENST00000609099 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
LINC01396-201ENST00000609099 ABCC9O60706 1549 aa20.6■□□□□ 0.89
LINC01396-201ENST00000609099 DNAJC5BQ9UF47 199 aa20.16■□□□□ 0.82
LINC01396-201ENST00000609099 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
LINC01396-201ENST00000609099 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
LINC01396-201ENST00000609099 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
LINC01396-201ENST00000609099 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
LINC01396-201ENST00000609099 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
LINC01396-201ENST00000609099 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
LINC01396-201ENST00000609099 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
LINC01396-201ENST00000609099 NACADO15069 1562 aa18.86■□□□□ 0.61
LINC01396-201ENST00000609099 DNAJC5Q9H3Z4 198 aa18.83■□□□□ 0.6
LINC01396-201ENST00000609099 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
LINC01396-201ENST00000609099 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
LINC01396-201ENST00000609099 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
LINC01396-201ENST00000609099 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
LINC01396-201ENST00000609099 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
LINC01396-201ENST00000609099 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
LINC01396-201ENST00000609099 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
LINC01396-201ENST00000609099 CUX2O14529 1486 aa17.96■□□□□ 0.47
LINC01396-201ENST00000609099 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
LINC01396-201ENST00000609099 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
LINC01396-201ENST00000609099 FOXD1Q16676 465 aa17.88■□□□□ 0.45
LINC01396-201ENST00000609099 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
LINC01396-201ENST00000609099 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
LINC01396-201ENST00000609099 NESP48681 1621 aa17.58■□□□□ 0.41
LINC01396-201ENST00000609099 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
LINC01396-201ENST00000609099 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
LINC01396-201ENST00000609099 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
LINC01396-201ENST00000609099 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
LINC01396-201ENST00000609099 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
LINC01396-201ENST00000609099 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
LINC01396-201ENST00000609099 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
LINC01396-201ENST00000609099 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
LINC01396-201ENST00000609099 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
LINC01396-201ENST00000609099 WDR62O43379 1518 aa17.06■□□□□ 0.32
LINC01396-201ENST00000609099 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
LINC01396-201ENST00000609099 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
LINC01396-201ENST00000609099 RIMBP3CA6NJZ7 1639 aa17.01■□□□□ 0.31
LINC01396-201ENST00000609099 RIMBP3BA6NNM3 1639 aa17.01■□□□□ 0.31
LINC01396-201ENST00000609099 RIMBP3Q9UFD9 1639 aa17.01■□□□□ 0.31
LINC01396-201ENST00000609099 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
LINC01396-201ENST00000609099 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
LINC01396-201ENST00000609099 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
LINC01396-201ENST00000609099 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
LINC01396-201ENST00000609099 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
LINC01396-201ENST00000609099 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
LINC01396-201ENST00000609099 MSH5O43196 834 aa16.85■□□□□ 0.29
LINC01396-201ENST00000609099 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
LINC01396-201ENST00000609099 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
LINC01396-201ENST00000609099 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
LINC01396-201ENST00000609099 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
LINC01396-201ENST00000609099 ARAP1Q96P48 1450 aa16.69■□□□□ 0.26
LINC01396-201ENST00000609099 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
LINC01396-201ENST00000609099 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
LINC01396-201ENST00000609099 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
LINC01396-201ENST00000609099 CYB5RLQ6IPT4 315 aa16.61■□□□□ 0.25
LINC01396-201ENST00000609099 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
LINC01396-201ENST00000609099 WIZO95785 1651 aa16.6■□□□□ 0.25
LINC01396-201ENST00000609099 CFTRP13569 1480 aa16.58■□□□□ 0.24
LINC01396-201ENST00000609099 CHD1O14646 1710 aa16.52■□□□□ 0.24
LINC01396-201ENST00000609099 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
LINC01396-201ENST00000609099 EIF4G3O43432 1585 aaKnown RBP16.49■□□□□ 0.23
LINC01396-201ENST00000609099 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
LINC01396-201ENST00000609099 ADRA2BP18089 450 aa16.43■□□□□ 0.22
LINC01396-201ENST00000609099 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
LINC01396-201ENST00000609099 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
LINC01396-201ENST00000609099 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
LINC01396-201ENST00000609099 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
LINC01396-201ENST00000609099 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC01396-201ENST00000609099 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
LINC01396-201ENST00000609099 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
LINC01396-201ENST00000609099 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
LINC01396-201ENST00000609099 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
LINC01396-201ENST00000609099 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
LINC01396-201ENST00000609099 FBLN2P98095 1184 aa16.14■□□□□ 0.17
LINC01396-201ENST00000609099 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
LINC01396-201ENST00000609099 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
LINC01396-201ENST00000609099 RAD54L2Q9Y4B4 1467 aa16.13■□□□□ 0.17
LINC01396-201ENST00000609099 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
LINC01396-201ENST00000609099 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
LINC01396-201ENST00000609099 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
LINC01396-201ENST00000609099 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
LINC01396-201ENST00000609099 SYNJ1O43426 1573 aa16.06■□□□□ 0.16
LINC01396-201ENST00000609099 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
LINC01396-201ENST00000609099 KDM4FA0A1W2PPD8 638 aa16.01■□□□□ 0.15
LINC01396-201ENST00000609099 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
LINC01396-201ENST00000609099 WDR97A6NE52 1622 aa15.96■□□□□ 0.15
LINC01396-201ENST00000609099 SYNJ2O15056 1496 aa15.96■□□□□ 0.14
LINC01396-201ENST00000609099 SOGA1O94964 1423 aa15.94■□□□□ 0.14
LINC01396-201ENST00000609099 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
LINC01396-201ENST00000609099 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
LINC01396-201ENST00000609099 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
LINC01396-201ENST00000609099 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
LINC01396-201ENST00000609099 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
LINC01396-201ENST00000609099 CUX1P39880 1505 aa15.87■□□□□ 0.13
LINC01396-201ENST00000609099 SHROOM2Q13796 1616 aa15.84■□□□□ 0.13
LINC01396-201ENST00000609099 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms