RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
LINC01954-201ENST00000607419 ABCC9O60706 1549 aa23.2■■□□□ 1.3
LINC01954-201ENST00000607419 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
LINC01954-201ENST00000607419 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
LINC01954-201ENST00000607419 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.17
LINC01954-201ENST00000607419 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
LINC01954-201ENST00000607419 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
LINC01954-201ENST00000607419 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
LINC01954-201ENST00000607419 NACADO15069 1562 aa21.48■■□□□ 1.03
LINC01954-201ENST00000607419 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
LINC01954-201ENST00000607419 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
LINC01954-201ENST00000607419 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
LINC01954-201ENST00000607419 MYO15BQ96JP2 1530 aa20.98■□□□□ 0.95
LINC01954-201ENST00000607419 CC2D2AQ9P2K1 1620 aa20.95■□□□□ 0.94
LINC01954-201ENST00000607419 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
LINC01954-201ENST00000607419 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
LINC01954-201ENST00000607419 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
LINC01954-201ENST00000607419 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
LINC01954-201ENST00000607419 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
LINC01954-201ENST00000607419 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
LINC01954-201ENST00000607419 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
LINC01954-201ENST00000607419 CUX2O14529 1486 aa20.07■□□□□ 0.8
LINC01954-201ENST00000607419 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
LINC01954-201ENST00000607419 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
LINC01954-201ENST00000607419 NESP48681 1621 aa19.85■□□□□ 0.77
LINC01954-201ENST00000607419 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
LINC01954-201ENST00000607419 THOC2Q8NI27 1593 aaKnown RBP19.7■□□□□ 0.74
LINC01954-201ENST00000607419 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
LINC01954-201ENST00000607419 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
LINC01954-201ENST00000607419 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
LINC01954-201ENST00000607419 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
LINC01954-201ENST00000607419 SMARCA2P51531 1590 aa19.6■□□□□ 0.73
LINC01954-201ENST00000607419 BAZ1BQ9UIG0 1483 aaKnown RBP19.49■□□□□ 0.71
LINC01954-201ENST00000607419 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
LINC01954-201ENST00000607419 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
LINC01954-201ENST00000607419 PEG3Q9GZU2 1588 aa19.41■□□□□ 0.7
LINC01954-201ENST00000607419 BAZ1AQ9NRL2 1556 aaPredicted RBP19.38■□□□□ 0.69
LINC01954-201ENST00000607419 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
LINC01954-201ENST00000607419 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
LINC01954-201ENST00000607419 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
LINC01954-201ENST00000607419 WDR62O43379 1518 aa19.24■□□□□ 0.67
LINC01954-201ENST00000607419 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
LINC01954-201ENST00000607419 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
LINC01954-201ENST00000607419 WIZO95785 1651 aa19.14■□□□□ 0.65
LINC01954-201ENST00000607419 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
LINC01954-201ENST00000607419 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
LINC01954-201ENST00000607419 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
LINC01954-201ENST00000607419 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
LINC01954-201ENST00000607419 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
LINC01954-201ENST00000607419 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
LINC01954-201ENST00000607419 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
LINC01954-201ENST00000607419 CFTRP13569 1480 aa18.92■□□□□ 0.62
LINC01954-201ENST00000607419 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
LINC01954-201ENST00000607419 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
LINC01954-201ENST00000607419 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
LINC01954-201ENST00000607419 CYB5RLQ6IPT4 315 aa18.78■□□□□ 0.6
LINC01954-201ENST00000607419 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
LINC01954-201ENST00000607419 CHD1O14646 1710 aa18.71■□□□□ 0.59
LINC01954-201ENST00000607419 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
LINC01954-201ENST00000607419 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
LINC01954-201ENST00000607419 IFT140Q96RY7 1462 aa18.67■□□□□ 0.58
LINC01954-201ENST00000607419 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
LINC01954-201ENST00000607419 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
LINC01954-201ENST00000607419 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
LINC01954-201ENST00000607419 AQRO60306 1485 aaKnown RBP eCLIP18.6■□□□□ 0.57
LINC01954-201ENST00000607419 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
LINC01954-201ENST00000607419 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
LINC01954-201ENST00000607419 FBLN2P98095 1184 aa18.5■□□□□ 0.55
LINC01954-201ENST00000607419 DNMBPQ6XZF7 1577 aa18.49■□□□□ 0.55
LINC01954-201ENST00000607419 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
LINC01954-201ENST00000607419 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
LINC01954-201ENST00000607419 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
LINC01954-201ENST00000607419 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
LINC01954-201ENST00000607419 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.54
LINC01954-201ENST00000607419 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
LINC01954-201ENST00000607419 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
LINC01954-201ENST00000607419 SOGA1O94964 1423 aa18.31■□□□□ 0.52
LINC01954-201ENST00000607419 CHMP7Q8WUX9 453 aaPredicted RBP18.25■□□□□ 0.51
LINC01954-201ENST00000607419 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
LINC01954-201ENST00000607419 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
LINC01954-201ENST00000607419 FOXD1Q16676 465 aa18.2■□□□□ 0.5
LINC01954-201ENST00000607419 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
LINC01954-201ENST00000607419 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
LINC01954-201ENST00000607419 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
LINC01954-201ENST00000607419 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
LINC01954-201ENST00000607419 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
LINC01954-201ENST00000607419 CUX1P39880 1505 aa18.18■□□□□ 0.5
LINC01954-201ENST00000607419 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
LINC01954-201ENST00000607419 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
LINC01954-201ENST00000607419 KIF13AQ9H1H9 1805 aa18.11■□□□□ 0.49
LINC01954-201ENST00000607419 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
LINC01954-201ENST00000607419 CEP170Q5SW79 1584 aa18■□□□□ 0.47
LINC01954-201ENST00000607419 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
LINC01954-201ENST00000607419 SHROOM2Q13796 1616 aa17.95■□□□□ 0.46
LINC01954-201ENST00000607419 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
LINC01954-201ENST00000607419 NUP160Q12769 1436 aa17.92■□□□□ 0.46
LINC01954-201ENST00000607419 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
LINC01954-201ENST00000607419 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
LINC01954-201ENST00000607419 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
LINC01954-201ENST00000607419 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms