RNA–Protein interactions for RNA: ENST00000606879.1

AP005328.2-201, humanhuman

TSL 3 BASIC

Gene AP005328.2, Length 657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005328.2-201ENST00000606879 AEBP2Q6ZN18 517 aaPredicted RBP18.46■□□□□ 0.55
AP005328.2-201ENST00000606879 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
AP005328.2-201ENST00000606879 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
AP005328.2-201ENST00000606879 CCDC180Q9P1Z9 1646 aa16.54■□□□□ 0.24
AP005328.2-201ENST00000606879 ABCC9O60706 1549 aa16.5■□□□□ 0.23
AP005328.2-201ENST00000606879 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
AP005328.2-201ENST00000606879 RB1CC1Q8TDY2 1594 aa15.7■□□□□ 0.1
AP005328.2-201ENST00000606879 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
AP005328.2-201ENST00000606879 NACADO15069 1562 aa15.59■□□□□ 0.09
AP005328.2-201ENST00000606879 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
AP005328.2-201ENST00000606879 UNC13AQ9UPW8 1703 aa15.53■□□□□ 0.08
AP005328.2-201ENST00000606879 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
AP005328.2-201ENST00000606879 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
AP005328.2-201ENST00000606879 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
AP005328.2-201ENST00000606879 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
AP005328.2-201ENST00000606879 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
AP005328.2-201ENST00000606879 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
AP005328.2-201ENST00000606879 SHROOM4Q9ULL8 1493 aa15.04■□□□□ -0
AP005328.2-201ENST00000606879 SCRIBQ14160 1630 aa15□□□□□ -0.01
AP005328.2-201ENST00000606879 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
AP005328.2-201ENST00000606879 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
AP005328.2-201ENST00000606879 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
AP005328.2-201ENST00000606879 FOXD1Q16676 465 aa14.62□□□□□ -0.07
AP005328.2-201ENST00000606879 PLPPR3Q6T4P5 718 aa14.39□□□□□ -0.11
AP005328.2-201ENST00000606879 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
AP005328.2-201ENST00000606879 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
AP005328.2-201ENST00000606879 ATAD2BQ9ULI0 1458 aa14.32□□□□□ -0.12
AP005328.2-201ENST00000606879 DNAJC5Q9H3Z4 198 aa14.31□□□□□ -0.12
AP005328.2-201ENST00000606879 HMGXB3Q12766 1538 aa14.29□□□□□ -0.12
AP005328.2-201ENST00000606879 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
AP005328.2-201ENST00000606879 CUX2O14529 1486 aa14.26□□□□□ -0.13
AP005328.2-201ENST00000606879 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
AP005328.2-201ENST00000606879 BAZ1AQ9NRL2 1556 aaPredicted RBP14.21□□□□□ -0.14
AP005328.2-201ENST00000606879 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
AP005328.2-201ENST00000606879 NESP48681 1621 aa14.19□□□□□ -0.14
AP005328.2-201ENST00000606879 BAZ1BQ9UIG0 1483 aaKnown RBP14.14□□□□□ -0.15
AP005328.2-201ENST00000606879 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
AP005328.2-201ENST00000606879 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
AP005328.2-201ENST00000606879 LAMC3Q9Y6N6 1575 aa14.09□□□□□ -0.15
AP005328.2-201ENST00000606879 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
AP005328.2-201ENST00000606879 WIZO95785 1651 aa13.98□□□□□ -0.17
AP005328.2-201ENST00000606879 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
AP005328.2-201ENST00000606879 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
AP005328.2-201ENST00000606879 WDR62O43379 1518 aa13.87□□□□□ -0.19
AP005328.2-201ENST00000606879 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
AP005328.2-201ENST00000606879 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
AP005328.2-201ENST00000606879 ADRA2BP18089 450 aa13.85□□□□□ -0.19
AP005328.2-201ENST00000606879 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
AP005328.2-201ENST00000606879 PRDM2Q13029 1718 aa13.77□□□□□ -0.21
AP005328.2-201ENST00000606879 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
AP005328.2-201ENST00000606879 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
AP005328.2-201ENST00000606879 CFTRP13569 1480 aa13.75□□□□□ -0.21
AP005328.2-201ENST00000606879 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
AP005328.2-201ENST00000606879 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
AP005328.2-201ENST00000606879 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
AP005328.2-201ENST00000606879 MSH5O43196 834 aa13.64□□□□□ -0.23
AP005328.2-201ENST00000606879 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
AP005328.2-201ENST00000606879 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
AP005328.2-201ENST00000606879 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
AP005328.2-201ENST00000606879 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
AP005328.2-201ENST00000606879 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
AP005328.2-201ENST00000606879 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
AP005328.2-201ENST00000606879 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
AP005328.2-201ENST00000606879 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
AP005328.2-201ENST00000606879 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
AP005328.2-201ENST00000606879 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
AP005328.2-201ENST00000606879 DNMBPQ6XZF7 1577 aa13.47□□□□□ -0.25
AP005328.2-201ENST00000606879 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
AP005328.2-201ENST00000606879 CHD1O14646 1710 aa13.44□□□□□ -0.26
AP005328.2-201ENST00000606879 ABCC8Q09428 1581 aa13.44□□□□□ -0.26
AP005328.2-201ENST00000606879 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
AP005328.2-201ENST00000606879 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
AP005328.2-201ENST00000606879 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
AP005328.2-201ENST00000606879 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.27
AP005328.2-201ENST00000606879 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
AP005328.2-201ENST00000606879 WDR97A6NE52 1622 aa13.29□□□□□ -0.28
AP005328.2-201ENST00000606879 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
AP005328.2-201ENST00000606879 CUX1P39880 1505 aa13.26□□□□□ -0.29
AP005328.2-201ENST00000606879 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
AP005328.2-201ENST00000606879 SOGA1O94964 1423 aa13.25□□□□□ -0.29
AP005328.2-201ENST00000606879 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
AP005328.2-201ENST00000606879 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
AP005328.2-201ENST00000606879 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
AP005328.2-201ENST00000606879 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
AP005328.2-201ENST00000606879 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
AP005328.2-201ENST00000606879 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
AP005328.2-201ENST00000606879 FBLN2P98095 1184 aa13.18□□□□□ -0.3
AP005328.2-201ENST00000606879 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
AP005328.2-201ENST00000606879 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
AP005328.2-201ENST00000606879 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
AP005328.2-201ENST00000606879 SYNJ2O15056 1496 aa13.14□□□□□ -0.31
AP005328.2-201ENST00000606879 ABCA10Q8WWZ4 1543 aa13.11□□□□□ -0.31
AP005328.2-201ENST00000606879 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
AP005328.2-201ENST00000606879 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
AP005328.2-201ENST00000606879 BIVM-ERCC5R4GMW8 1640 aa13.08□□□□□ -0.32
AP005328.2-201ENST00000606879 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
AP005328.2-201ENST00000606879 ADAMTS12P58397 1594 aa13.05□□□□□ -0.32
AP005328.2-201ENST00000606879 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
AP005328.2-201ENST00000606879 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
AP005328.2-201ENST00000606879 CEP170Q5SW79 1584 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms