RNA–Protein interactions for RNA: ENST00000606761.1

AL359643.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL359643.3, Length 1,086 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359643.3-201ENST00000606761 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
AL359643.3-201ENST00000606761 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
AL359643.3-201ENST00000606761 CHIC1Q5VXU3 224 aa26.19■■□□□ 1.78
AL359643.3-201ENST00000606761 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
AL359643.3-201ENST00000606761 ABCC9O60706 1549 aa23.86■■□□□ 1.41
AL359643.3-201ENST00000606761 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
AL359643.3-201ENST00000606761 PHF23Q9BUL5 403 aaPredicted RBP23.09■■□□□ 1.29
AL359643.3-201ENST00000606761 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
AL359643.3-201ENST00000606761 NACADO15069 1562 aa22.86■■□□□ 1.25
AL359643.3-201ENST00000606761 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
AL359643.3-201ENST00000606761 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
AL359643.3-201ENST00000606761 UNC13AQ9UPW8 1703 aa22.3■■□□□ 1.16
AL359643.3-201ENST00000606761 DCAF1Q9Y4B6 1507 aa22.3■■□□□ 1.16
AL359643.3-201ENST00000606761 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
AL359643.3-201ENST00000606761 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
AL359643.3-201ENST00000606761 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
AL359643.3-201ENST00000606761 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
AL359643.3-201ENST00000606761 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
AL359643.3-201ENST00000606761 FOXD1Q16676 465 aa21.81■■□□□ 1.08
AL359643.3-201ENST00000606761 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
AL359643.3-201ENST00000606761 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
AL359643.3-201ENST00000606761 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
AL359643.3-201ENST00000606761 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
AL359643.3-201ENST00000606761 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
AL359643.3-201ENST00000606761 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
AL359643.3-201ENST00000606761 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
AL359643.3-201ENST00000606761 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
AL359643.3-201ENST00000606761 CUX2O14529 1486 aa20.93■□□□□ 0.94
AL359643.3-201ENST00000606761 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
AL359643.3-201ENST00000606761 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
AL359643.3-201ENST00000606761 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
AL359643.3-201ENST00000606761 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
AL359643.3-201ENST00000606761 PEG3Q9GZU2 1588 aa20.81■□□□□ 0.92
AL359643.3-201ENST00000606761 ERCC6Q03468 1493 aa20.73■□□□□ 0.91
AL359643.3-201ENST00000606761 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
AL359643.3-201ENST00000606761 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
AL359643.3-201ENST00000606761 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
AL359643.3-201ENST00000606761 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
AL359643.3-201ENST00000606761 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
AL359643.3-201ENST00000606761 ADRA2BP18089 450 aa20.45■□□□□ 0.86
AL359643.3-201ENST00000606761 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
AL359643.3-201ENST00000606761 NESP48681 1621 aa20.44■□□□□ 0.86
AL359643.3-201ENST00000606761 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
AL359643.3-201ENST00000606761 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
AL359643.3-201ENST00000606761 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
AL359643.3-201ENST00000606761 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
AL359643.3-201ENST00000606761 WDR62O43379 1518 aa20.23■□□□□ 0.83
AL359643.3-201ENST00000606761 MSH5O43196 834 aa20.19■□□□□ 0.82
AL359643.3-201ENST00000606761 WIZO95785 1651 aa20.16■□□□□ 0.82
AL359643.3-201ENST00000606761 CFTRP13569 1480 aa20.13■□□□□ 0.81
AL359643.3-201ENST00000606761 CEP164Q9UPV0 1460 aa20.13■□□□□ 0.81
AL359643.3-201ENST00000606761 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
AL359643.3-201ENST00000606761 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
AL359643.3-201ENST00000606761 RSF1Q96T23 1441 aaPredicted RBP20.04■□□□□ 0.8
AL359643.3-201ENST00000606761 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
AL359643.3-201ENST00000606761 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
AL359643.3-201ENST00000606761 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
AL359643.3-201ENST00000606761 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
AL359643.3-201ENST00000606761 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
AL359643.3-201ENST00000606761 CCDC88BA6NC98 1476 aa19.74■□□□□ 0.75
AL359643.3-201ENST00000606761 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
AL359643.3-201ENST00000606761 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
AL359643.3-201ENST00000606761 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
AL359643.3-201ENST00000606761 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
AL359643.3-201ENST00000606761 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
AL359643.3-201ENST00000606761 TRIM41Q8WV44 630 aa19.6■□□□□ 0.73
AL359643.3-201ENST00000606761 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
AL359643.3-201ENST00000606761 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
AL359643.3-201ENST00000606761 TARBP1Q13395 1621 aaKnown RBP19.52■□□□□ 0.72
AL359643.3-201ENST00000606761 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
AL359643.3-201ENST00000606761 RIMBP3BA6NNM3 1639 aa19.5■□□□□ 0.71
AL359643.3-201ENST00000606761 RIMBP3Q9UFD9 1639 aa19.5■□□□□ 0.71
AL359643.3-201ENST00000606761 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
AL359643.3-201ENST00000606761 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
AL359643.3-201ENST00000606761 CHD1O14646 1710 aa19.37■□□□□ 0.69
AL359643.3-201ENST00000606761 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.69
AL359643.3-201ENST00000606761 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
AL359643.3-201ENST00000606761 SOGA1O94964 1423 aa19.34■□□□□ 0.69
AL359643.3-201ENST00000606761 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
AL359643.3-201ENST00000606761 SYNJ1O43426 1573 aa19.28■□□□□ 0.68
AL359643.3-201ENST00000606761 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
AL359643.3-201ENST00000606761 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
AL359643.3-201ENST00000606761 CUX1P39880 1505 aa19.25■□□□□ 0.67
AL359643.3-201ENST00000606761 RAD54L2Q9Y4B4 1467 aa19.24■□□□□ 0.67
AL359643.3-201ENST00000606761 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
AL359643.3-201ENST00000606761 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
AL359643.3-201ENST00000606761 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
AL359643.3-201ENST00000606761 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
AL359643.3-201ENST00000606761 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
AL359643.3-201ENST00000606761 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
AL359643.3-201ENST00000606761 FBLN2P98095 1184 aa19.15■□□□□ 0.66
AL359643.3-201ENST00000606761 CHMP7Q8WUX9 453 aaPredicted RBP19.15■□□□□ 0.66
AL359643.3-201ENST00000606761 GAPVD1Q14C86 1478 aa19.15■□□□□ 0.66
AL359643.3-201ENST00000606761 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
AL359643.3-201ENST00000606761 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
AL359643.3-201ENST00000606761 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
AL359643.3-201ENST00000606761 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
AL359643.3-201ENST00000606761 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
AL359643.3-201ENST00000606761 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
AL359643.3-201ENST00000606761 GRIN2AQ12879 1464 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms