RNA–Protein interactions for RNA: ENST00000605379.1

KNOP1P2-201, Transcript of lysine rich nucleolar protein 1 pseudogene 2, humanhuman

BASIC

Gene KNOP1P2, Length 1,317 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P2-201ENST00000605379 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
KNOP1P2-201ENST00000605379 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
KNOP1P2-201ENST00000605379 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
KNOP1P2-201ENST00000605379 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
KNOP1P2-201ENST00000605379 ABCC9O60706 1549 aa22.88■■□□□ 1.25
KNOP1P2-201ENST00000605379 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
KNOP1P2-201ENST00000605379 NACADO15069 1562 aa21.68■■□□□ 1.06
KNOP1P2-201ENST00000605379 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
KNOP1P2-201ENST00000605379 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
KNOP1P2-201ENST00000605379 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.02
KNOP1P2-201ENST00000605379 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
KNOP1P2-201ENST00000605379 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
KNOP1P2-201ENST00000605379 ZCCHC6Q5VYS8 1495 aaKnown RBP21.23■□□□□ 0.99
KNOP1P2-201ENST00000605379 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
KNOP1P2-201ENST00000605379 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.98
KNOP1P2-201ENST00000605379 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
KNOP1P2-201ENST00000605379 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.93
KNOP1P2-201ENST00000605379 CC2D2AQ9P2K1 1620 aa20.69■□□□□ 0.9
KNOP1P2-201ENST00000605379 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
KNOP1P2-201ENST00000605379 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
KNOP1P2-201ENST00000605379 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
KNOP1P2-201ENST00000605379 NCAPD3P42695 1498 aa20■□□□□ 0.79
KNOP1P2-201ENST00000605379 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
KNOP1P2-201ENST00000605379 ATAD2BQ9ULI0 1458 aa19.95■□□□□ 0.78
KNOP1P2-201ENST00000605379 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
KNOP1P2-201ENST00000605379 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
KNOP1P2-201ENST00000605379 BAZ1AQ9NRL2 1556 aaPredicted RBP19.86■□□□□ 0.77
KNOP1P2-201ENST00000605379 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
KNOP1P2-201ENST00000605379 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
KNOP1P2-201ENST00000605379 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
KNOP1P2-201ENST00000605379 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
KNOP1P2-201ENST00000605379 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
KNOP1P2-201ENST00000605379 CUX2O14529 1486 aa19.7■□□□□ 0.74
KNOP1P2-201ENST00000605379 NESP48681 1621 aa19.68■□□□□ 0.74
KNOP1P2-201ENST00000605379 DNAJC5Q9H3Z4 198 aa19.6■□□□□ 0.73
KNOP1P2-201ENST00000605379 LAMC3Q9Y6N6 1575 aa19.55■□□□□ 0.72
KNOP1P2-201ENST00000605379 WIZO95785 1651 aa19.5■□□□□ 0.71
KNOP1P2-201ENST00000605379 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
KNOP1P2-201ENST00000605379 KIF21AQ7Z4S6 1674 aa19.45■□□□□ 0.7
KNOP1P2-201ENST00000605379 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
KNOP1P2-201ENST00000605379 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
KNOP1P2-201ENST00000605379 RSF1Q96T23 1441 aaPredicted RBP19.32■□□□□ 0.68
KNOP1P2-201ENST00000605379 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
KNOP1P2-201ENST00000605379 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
KNOP1P2-201ENST00000605379 WDR62O43379 1518 aa19.22■□□□□ 0.67
KNOP1P2-201ENST00000605379 CFTRP13569 1480 aa19.19■□□□□ 0.66
KNOP1P2-201ENST00000605379 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
KNOP1P2-201ENST00000605379 FANCD2Q9BXW9 1451 aa19.17■□□□□ 0.66
KNOP1P2-201ENST00000605379 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
KNOP1P2-201ENST00000605379 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
KNOP1P2-201ENST00000605379 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
KNOP1P2-201ENST00000605379 CCDC88BA6NC98 1476 aa19.02■□□□□ 0.64
KNOP1P2-201ENST00000605379 TOPBP1Q92547 1522 aa18.83■□□□□ 0.61
KNOP1P2-201ENST00000605379 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
KNOP1P2-201ENST00000605379 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
KNOP1P2-201ENST00000605379 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
KNOP1P2-201ENST00000605379 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
KNOP1P2-201ENST00000605379 DNMBPQ6XZF7 1577 aa18.77■□□□□ 0.6
KNOP1P2-201ENST00000605379 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
KNOP1P2-201ENST00000605379 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
KNOP1P2-201ENST00000605379 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
KNOP1P2-201ENST00000605379 POLA1P09884 1462 aaPredicted RBP18.64■□□□□ 0.57
KNOP1P2-201ENST00000605379 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
KNOP1P2-201ENST00000605379 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
KNOP1P2-201ENST00000605379 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
KNOP1P2-201ENST00000605379 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
KNOP1P2-201ENST00000605379 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
KNOP1P2-201ENST00000605379 CHD1O14646 1710 aa18.55■□□□□ 0.56
KNOP1P2-201ENST00000605379 SOGA1O94964 1423 aa18.55■□□□□ 0.56
KNOP1P2-201ENST00000605379 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
KNOP1P2-201ENST00000605379 CUX1P39880 1505 aa18.53■□□□□ 0.56
KNOP1P2-201ENST00000605379 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
KNOP1P2-201ENST00000605379 TDRD9Q8NDG6 1382 aaKnown RBP18.5■□□□□ 0.55
KNOP1P2-201ENST00000605379 SUPT5HO00267 1087 aaKnown RBP18.49■□□□□ 0.55
KNOP1P2-201ENST00000605379 WDR97A6NE52 1622 aa18.48■□□□□ 0.55
KNOP1P2-201ENST00000605379 FBLN2P98095 1184 aa18.46■□□□□ 0.55
KNOP1P2-201ENST00000605379 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
KNOP1P2-201ENST00000605379 GRIN2BQ13224 1484 aa18.38■□□□□ 0.53
KNOP1P2-201ENST00000605379 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
KNOP1P2-201ENST00000605379 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
KNOP1P2-201ENST00000605379 CYB5RLQ6IPT4 315 aa18.34■□□□□ 0.53
KNOP1P2-201ENST00000605379 ARAP1Q96P48 1450 aa18.33■□□□□ 0.53
KNOP1P2-201ENST00000605379 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.53
KNOP1P2-201ENST00000605379 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
KNOP1P2-201ENST00000605379 ABCA10Q8WWZ4 1543 aa18.33■□□□□ 0.52
KNOP1P2-201ENST00000605379 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
KNOP1P2-201ENST00000605379 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
KNOP1P2-201ENST00000605379 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
KNOP1P2-201ENST00000605379 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
KNOP1P2-201ENST00000605379 FOXD1Q16676 465 aa18.3■□□□□ 0.52
KNOP1P2-201ENST00000605379 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
KNOP1P2-201ENST00000605379 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
KNOP1P2-201ENST00000605379 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
KNOP1P2-201ENST00000605379 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
KNOP1P2-201ENST00000605379 GRIN2AQ12879 1464 aa18.15■□□□□ 0.5
KNOP1P2-201ENST00000605379 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
KNOP1P2-201ENST00000605379 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
KNOP1P2-201ENST00000605379 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
KNOP1P2-201ENST00000605379 NUP160Q12769 1436 aa18.09■□□□□ 0.49
KNOP1P2-201ENST00000605379 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms