RNA–Protein interactions for RNA: ENST00000605242.5

SRGAP2-213, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 4

Gene SRGAP2, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-213ENST00000605242 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
SRGAP2-213ENST00000605242 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
SRGAP2-213ENST00000605242 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
SRGAP2-213ENST00000605242 CCDC180Q9P1Z9 1646 aa25.89■■□□□ 1.74
SRGAP2-213ENST00000605242 ABCC9O60706 1549 aa25.52■■□□□ 1.68
SRGAP2-213ENST00000605242 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
SRGAP2-213ENST00000605242 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
SRGAP2-213ENST00000605242 NACADO15069 1562 aa24.43■■□□□ 1.5
SRGAP2-213ENST00000605242 MYO15BQ96JP2 1530 aa24.26■■□□□ 1.47
SRGAP2-213ENST00000605242 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
SRGAP2-213ENST00000605242 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
SRGAP2-213ENST00000605242 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
SRGAP2-213ENST00000605242 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
SRGAP2-213ENST00000605242 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
SRGAP2-213ENST00000605242 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.37
SRGAP2-213ENST00000605242 SCRIBQ14160 1630 aa23.6■■□□□ 1.37
SRGAP2-213ENST00000605242 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
SRGAP2-213ENST00000605242 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
SRGAP2-213ENST00000605242 CC2D2AQ9P2K1 1620 aa23.06■■□□□ 1.28
SRGAP2-213ENST00000605242 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
SRGAP2-213ENST00000605242 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
SRGAP2-213ENST00000605242 SMARCA4P51532 1647 aa22.58■■□□□ 1.21
SRGAP2-213ENST00000605242 NCAPD3P42695 1498 aa22.58■■□□□ 1.2
SRGAP2-213ENST00000605242 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
SRGAP2-213ENST00000605242 ATAD2BQ9ULI0 1458 aa22.54■■□□□ 1.2
SRGAP2-213ENST00000605242 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
SRGAP2-213ENST00000605242 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
SRGAP2-213ENST00000605242 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
SRGAP2-213ENST00000605242 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
SRGAP2-213ENST00000605242 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
SRGAP2-213ENST00000605242 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
SRGAP2-213ENST00000605242 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
SRGAP2-213ENST00000605242 WIZO95785 1651 aa22.14■■□□□ 1.13
SRGAP2-213ENST00000605242 NESP48681 1621 aa22.03■■□□□ 1.12
SRGAP2-213ENST00000605242 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
SRGAP2-213ENST00000605242 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
SRGAP2-213ENST00000605242 CADPSQ9ULU8 1353 aa21.92■■□□□ 1.1
SRGAP2-213ENST00000605242 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
SRGAP2-213ENST00000605242 PDS5BQ9NTI5 1447 aa21.87■■□□□ 1.09
SRGAP2-213ENST00000605242 CUX2O14529 1486 aa21.85■■□□□ 1.09
SRGAP2-213ENST00000605242 CFTRP13569 1480 aa21.73■■□□□ 1.07
SRGAP2-213ENST00000605242 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
SRGAP2-213ENST00000605242 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
SRGAP2-213ENST00000605242 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
SRGAP2-213ENST00000605242 FANCD2Q9BXW9 1451 aa21.63■■□□□ 1.05
SRGAP2-213ENST00000605242 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
SRGAP2-213ENST00000605242 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
SRGAP2-213ENST00000605242 WDR62O43379 1518 aa21.52■■□□□ 1.04
SRGAP2-213ENST00000605242 SUPT5HO00267 1087 aaKnown RBP21.47■■□□□ 1.03
SRGAP2-213ENST00000605242 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
SRGAP2-213ENST00000605242 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
SRGAP2-213ENST00000605242 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
SRGAP2-213ENST00000605242 ABCC8Q09428 1581 aa21.29■■□□□ 1
SRGAP2-213ENST00000605242 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
SRGAP2-213ENST00000605242 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
SRGAP2-213ENST00000605242 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
SRGAP2-213ENST00000605242 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
SRGAP2-213ENST00000605242 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
SRGAP2-213ENST00000605242 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
SRGAP2-213ENST00000605242 TARBP1Q13395 1621 aaKnown RBP21.03■□□□□ 0.96
SRGAP2-213ENST00000605242 CUX1P39880 1505 aa21.03■□□□□ 0.96
SRGAP2-213ENST00000605242 SOGA1O94964 1423 aa21.02■□□□□ 0.96
SRGAP2-213ENST00000605242 OSCARQ8IYS5 282 aa21■□□□□ 0.95
SRGAP2-213ENST00000605242 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
SRGAP2-213ENST00000605242 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
SRGAP2-213ENST00000605242 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
SRGAP2-213ENST00000605242 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
SRGAP2-213ENST00000605242 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
SRGAP2-213ENST00000605242 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
SRGAP2-213ENST00000605242 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
SRGAP2-213ENST00000605242 FOXD1Q16676 465 aa20.84■□□□□ 0.93
SRGAP2-213ENST00000605242 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
SRGAP2-213ENST00000605242 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
SRGAP2-213ENST00000605242 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
SRGAP2-213ENST00000605242 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
SRGAP2-213ENST00000605242 FBLN2P98095 1184 aa20.77■□□□□ 0.92
SRGAP2-213ENST00000605242 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
SRGAP2-213ENST00000605242 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
SRGAP2-213ENST00000605242 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
SRGAP2-213ENST00000605242 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
SRGAP2-213ENST00000605242 CHMP7Q8WUX9 453 aaPredicted RBP20.71■□□□□ 0.91
SRGAP2-213ENST00000605242 CHD1O14646 1710 aa20.7■□□□□ 0.9
SRGAP2-213ENST00000605242 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
SRGAP2-213ENST00000605242 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
SRGAP2-213ENST00000605242 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
SRGAP2-213ENST00000605242 TRIM41Q8WV44 630 aa20.61■□□□□ 0.89
SRGAP2-213ENST00000605242 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SRGAP2-213ENST00000605242 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SRGAP2-213ENST00000605242 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SRGAP2-213ENST00000605242 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
SRGAP2-213ENST00000605242 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
SRGAP2-213ENST00000605242 FHAD1B1AJZ9 1412 aa20.52■□□□□ 0.87
SRGAP2-213ENST00000605242 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
SRGAP2-213ENST00000605242 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
SRGAP2-213ENST00000605242 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
SRGAP2-213ENST00000605242 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
SRGAP2-213ENST00000605242 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
SRGAP2-213ENST00000605242 IGF1RP08069 1367 aa20.43■□□□□ 0.86
SRGAP2-213ENST00000605242 NUP160Q12769 1436 aa20.41■□□□□ 0.86
SRGAP2-213ENST00000605242 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms