RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
FOCAD-214ENST00000604828 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
FOCAD-214ENST00000604828 ABCC9O60706 1549 aa19.26■□□□□ 0.67
FOCAD-214ENST00000604828 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
FOCAD-214ENST00000604828 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
FOCAD-214ENST00000604828 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
FOCAD-214ENST00000604828 NACADO15069 1562 aa18.49■□□□□ 0.55
FOCAD-214ENST00000604828 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.54
FOCAD-214ENST00000604828 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
FOCAD-214ENST00000604828 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
FOCAD-214ENST00000604828 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
FOCAD-214ENST00000604828 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
FOCAD-214ENST00000604828 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
FOCAD-214ENST00000604828 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
FOCAD-214ENST00000604828 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
FOCAD-214ENST00000604828 DNAJC5BQ9UF47 199 aa17.65■□□□□ 0.42
FOCAD-214ENST00000604828 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
FOCAD-214ENST00000604828 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
FOCAD-214ENST00000604828 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
FOCAD-214ENST00000604828 CECR2Q9BXF3 1484 aa17.36■□□□□ 0.37
FOCAD-214ENST00000604828 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
FOCAD-214ENST00000604828 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
FOCAD-214ENST00000604828 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
FOCAD-214ENST00000604828 MROH2BQ7Z745 1585 aa17.17■□□□□ 0.34
FOCAD-214ENST00000604828 ATAD2BQ9ULI0 1458 aa17.13■□□□□ 0.33
FOCAD-214ENST00000604828 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
FOCAD-214ENST00000604828 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
FOCAD-214ENST00000604828 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
FOCAD-214ENST00000604828 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
FOCAD-214ENST00000604828 HMGXB3Q12766 1538 aa17■□□□□ 0.31
FOCAD-214ENST00000604828 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
FOCAD-214ENST00000604828 WIZO95785 1651 aa16.97■□□□□ 0.31
FOCAD-214ENST00000604828 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.28
FOCAD-214ENST00000604828 NESP48681 1621 aa16.71■□□□□ 0.27
FOCAD-214ENST00000604828 HRCP23327 699 aa16.66■□□□□ 0.26
FOCAD-214ENST00000604828 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
FOCAD-214ENST00000604828 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
FOCAD-214ENST00000604828 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
FOCAD-214ENST00000604828 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
FOCAD-214ENST00000604828 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
FOCAD-214ENST00000604828 PCGF6Q9BYE7 350 aa16.53■□□□□ 0.24
FOCAD-214ENST00000604828 CFTRP13569 1480 aa16.53■□□□□ 0.24
FOCAD-214ENST00000604828 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
FOCAD-214ENST00000604828 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
FOCAD-214ENST00000604828 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
FOCAD-214ENST00000604828 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
FOCAD-214ENST00000604828 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
FOCAD-214ENST00000604828 TRIM26Q12899 539 aaPredicted RBP16.39■□□□□ 0.21
FOCAD-214ENST00000604828 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
FOCAD-214ENST00000604828 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
FOCAD-214ENST00000604828 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.21
FOCAD-214ENST00000604828 CUX2O14529 1486 aa16.32■□□□□ 0.2
FOCAD-214ENST00000604828 WDR62O43379 1518 aa16.28■□□□□ 0.2
FOCAD-214ENST00000604828 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.19
FOCAD-214ENST00000604828 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
FOCAD-214ENST00000604828 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
FOCAD-214ENST00000604828 DNMBPQ6XZF7 1577 aa16.13■□□□□ 0.17
FOCAD-214ENST00000604828 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
FOCAD-214ENST00000604828 ZEB1P37275 1124 aaPredicted RBP16.11■□□□□ 0.17
FOCAD-214ENST00000604828 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
FOCAD-214ENST00000604828 CUX1P39880 1505 aa16.09■□□□□ 0.17
FOCAD-214ENST00000604828 EEA1Q15075 1411 aa16.06■□□□□ 0.16
FOCAD-214ENST00000604828 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
FOCAD-214ENST00000604828 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
FOCAD-214ENST00000604828 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
FOCAD-214ENST00000604828 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
FOCAD-214ENST00000604828 ZNF608Q9ULD9 1512 aaPredicted RBP16■□□□□ 0.15
FOCAD-214ENST00000604828 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
FOCAD-214ENST00000604828 TARBP1Q13395 1621 aaKnown RBP15.99■□□□□ 0.15
FOCAD-214ENST00000604828 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
FOCAD-214ENST00000604828 SOGA1O94964 1423 aa15.97■□□□□ 0.15
FOCAD-214ENST00000604828 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
FOCAD-214ENST00000604828 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
FOCAD-214ENST00000604828 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
FOCAD-214ENST00000604828 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
FOCAD-214ENST00000604828 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.14
FOCAD-214ENST00000604828 EIF4G3O43432 1585 aaKnown RBP15.91■□□□□ 0.14
FOCAD-214ENST00000604828 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
FOCAD-214ENST00000604828 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
FOCAD-214ENST00000604828 GOLGA3Q08378 1498 aa15.87■□□□□ 0.13
FOCAD-214ENST00000604828 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
FOCAD-214ENST00000604828 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
FOCAD-214ENST00000604828 WDR97A6NE52 1622 aa15.85■□□□□ 0.13
FOCAD-214ENST00000604828 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
FOCAD-214ENST00000604828 KIF21BO75037 1637 aa15.84■□□□□ 0.13
FOCAD-214ENST00000604828 RUSC2Q8N2Y8 1516 aa15.83■□□□□ 0.12
FOCAD-214ENST00000604828 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
FOCAD-214ENST00000604828 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
FOCAD-214ENST00000604828 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
FOCAD-214ENST00000604828 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
FOCAD-214ENST00000604828 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
FOCAD-214ENST00000604828 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
FOCAD-214ENST00000604828 FBLN2P98095 1184 aa15.71■□□□□ 0.1
FOCAD-214ENST00000604828 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
FOCAD-214ENST00000604828 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
FOCAD-214ENST00000604828 UBTFP17480 764 aaKnown RBP15.68■□□□□ 0.1
FOCAD-214ENST00000604828 CHD1O14646 1710 aa15.67■□□□□ 0.1
FOCAD-214ENST00000604828 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
FOCAD-214ENST00000604828 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
FOCAD-214ENST00000604828 KIF27Q86VH2 1401 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms