RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
SRGAP2-210ENST00000604419 ABCC9O60706 1549 aa21.9■■□□□ 1.1
SRGAP2-210ENST00000604419 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
SRGAP2-210ENST00000604419 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
SRGAP2-210ENST00000604419 NACADO15069 1562 aa20.69■□□□□ 0.9
SRGAP2-210ENST00000604419 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
SRGAP2-210ENST00000604419 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
SRGAP2-210ENST00000604419 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
SRGAP2-210ENST00000604419 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
SRGAP2-210ENST00000604419 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
SRGAP2-210ENST00000604419 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
SRGAP2-210ENST00000604419 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
SRGAP2-210ENST00000604419 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
SRGAP2-210ENST00000604419 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
SRGAP2-210ENST00000604419 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
SRGAP2-210ENST00000604419 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
SRGAP2-210ENST00000604419 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
SRGAP2-210ENST00000604419 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
SRGAP2-210ENST00000604419 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
SRGAP2-210ENST00000604419 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
SRGAP2-210ENST00000604419 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
SRGAP2-210ENST00000604419 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
SRGAP2-210ENST00000604419 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
SRGAP2-210ENST00000604419 CUX2O14529 1486 aa18.97■□□□□ 0.63
SRGAP2-210ENST00000604419 ERCC6Q03468 1493 aa18.95■□□□□ 0.62
SRGAP2-210ENST00000604419 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
SRGAP2-210ENST00000604419 HMGXB3Q12766 1538 aa18.92■□□□□ 0.62
SRGAP2-210ENST00000604419 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
SRGAP2-210ENST00000604419 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
SRGAP2-210ENST00000604419 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
SRGAP2-210ENST00000604419 NESP48681 1621 aa18.76■□□□□ 0.59
SRGAP2-210ENST00000604419 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
SRGAP2-210ENST00000604419 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
SRGAP2-210ENST00000604419 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
SRGAP2-210ENST00000604419 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
SRGAP2-210ENST00000604419 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
SRGAP2-210ENST00000604419 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
SRGAP2-210ENST00000604419 WIZO95785 1651 aa18.42■□□□□ 0.54
SRGAP2-210ENST00000604419 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
SRGAP2-210ENST00000604419 WDR62O43379 1518 aa18.33■□□□□ 0.53
SRGAP2-210ENST00000604419 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
SRGAP2-210ENST00000604419 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
SRGAP2-210ENST00000604419 CFTRP13569 1480 aa18.29■□□□□ 0.52
SRGAP2-210ENST00000604419 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
SRGAP2-210ENST00000604419 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
SRGAP2-210ENST00000604419 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
SRGAP2-210ENST00000604419 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
SRGAP2-210ENST00000604419 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
SRGAP2-210ENST00000604419 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
SRGAP2-210ENST00000604419 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
SRGAP2-210ENST00000604419 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
SRGAP2-210ENST00000604419 IFT140Q96RY7 1462 aa17.98■□□□□ 0.47
SRGAP2-210ENST00000604419 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
SRGAP2-210ENST00000604419 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
SRGAP2-210ENST00000604419 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
SRGAP2-210ENST00000604419 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.45
SRGAP2-210ENST00000604419 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
SRGAP2-210ENST00000604419 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
SRGAP2-210ENST00000604419 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
SRGAP2-210ENST00000604419 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
SRGAP2-210ENST00000604419 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.431e-6■■■■■ 33.8
SRGAP2-210ENST00000604419 ARHGEF11O15085 1522 aa17.75■□□□□ 0.43
SRGAP2-210ENST00000604419 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
SRGAP2-210ENST00000604419 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
SRGAP2-210ENST00000604419 FBLN2P98095 1184 aa17.71■□□□□ 0.43
SRGAP2-210ENST00000604419 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
SRGAP2-210ENST00000604419 SOGA1O94964 1423 aa17.7■□□□□ 0.42
SRGAP2-210ENST00000604419 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
SRGAP2-210ENST00000604419 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
SRGAP2-210ENST00000604419 CHD1O14646 1710 aa17.63■□□□□ 0.41
SRGAP2-210ENST00000604419 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
SRGAP2-210ENST00000604419 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
SRGAP2-210ENST00000604419 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
SRGAP2-210ENST00000604419 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
SRGAP2-210ENST00000604419 CUX1P39880 1505 aa17.55■□□□□ 0.4
SRGAP2-210ENST00000604419 SNAPC4Q5SXM2 1469 aa17.55■□□□□ 0.4
SRGAP2-210ENST00000604419 MAGI1Q96QZ7 1491 aaPredicted RBP17.55■□□□□ 0.4
SRGAP2-210ENST00000604419 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
SRGAP2-210ENST00000604419 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
SRGAP2-210ENST00000604419 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
SRGAP2-210ENST00000604419 SYNJ2O15056 1496 aa17.49■□□□□ 0.39
SRGAP2-210ENST00000604419 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
SRGAP2-210ENST00000604419 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
SRGAP2-210ENST00000604419 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
SRGAP2-210ENST00000604419 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
SRGAP2-210ENST00000604419 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SRGAP2-210ENST00000604419 PBRM1Q86U86 1689 aa17.36■□□□□ 0.37
SRGAP2-210ENST00000604419 ABCA5Q8WWZ7 1642 aa17.35■□□□□ 0.37
SRGAP2-210ENST00000604419 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
SRGAP2-210ENST00000604419 TOP2BQ02880 1626 aa17.26■□□□□ 0.35
SRGAP2-210ENST00000604419 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
SRGAP2-210ENST00000604419 NUP160Q12769 1436 aa17.24■□□□□ 0.35
SRGAP2-210ENST00000604419 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
SRGAP2-210ENST00000604419 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
SRGAP2-210ENST00000604419 ERICH3Q5RHP9 1530 aa17.21■□□□□ 0.34
SRGAP2-210ENST00000604419 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
SRGAP2-210ENST00000604419 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
SRGAP2-210ENST00000604419 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
SRGAP2-210ENST00000604419 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
SRGAP2-210ENST00000604419 PRG4Q92954 1404 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms