RNA–Protein interactions for RNA: ENST00000604324.1

CRX-206, Transcript of cone-rod homeobox, humanhuman

Gene CRX, Length 1,467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-206ENST00000604324 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
CRX-206ENST00000604324 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
CRX-206ENST00000604324 ABCC9O60706 1549 aa20.86■□□□□ 0.93
CRX-206ENST00000604324 NACADO15069 1562 aa20.14■□□□□ 0.81
CRX-206ENST00000604324 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
CRX-206ENST00000604324 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
CRX-206ENST00000604324 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
CRX-206ENST00000604324 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
CRX-206ENST00000604324 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.8
CRX-206ENST00000604324 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
CRX-206ENST00000604324 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
CRX-206ENST00000604324 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
CRX-206ENST00000604324 SCRIBQ14160 1630 aa19.5■□□□□ 0.71
CRX-206ENST00000604324 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
CRX-206ENST00000604324 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
CRX-206ENST00000604324 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
CRX-206ENST00000604324 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
CRX-206ENST00000604324 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.64
CRX-206ENST00000604324 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
CRX-206ENST00000604324 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
CRX-206ENST00000604324 SMARCA4P51532 1647 aa18.71■□□□□ 0.58
CRX-206ENST00000604324 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
CRX-206ENST00000604324 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
CRX-206ENST00000604324 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
CRX-206ENST00000604324 PEG3Q9GZU2 1588 aa18.59■□□□□ 0.57
CRX-206ENST00000604324 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
CRX-206ENST00000604324 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
CRX-206ENST00000604324 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
CRX-206ENST00000604324 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
CRX-206ENST00000604324 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
CRX-206ENST00000604324 WIZO95785 1651 aa18.36■□□□□ 0.53
CRX-206ENST00000604324 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
CRX-206ENST00000604324 NESP48681 1621 aa18.1■□□□□ 0.49
CRX-206ENST00000604324 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
CRX-206ENST00000604324 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.48
CRX-206ENST00000604324 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
CRX-206ENST00000604324 CFTRP13569 1480 aa17.96■□□□□ 0.46
CRX-206ENST00000604324 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
CRX-206ENST00000604324 PDS5BQ9NTI5 1447 aa17.9■□□□□ 0.46
CRX-206ENST00000604324 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
CRX-206ENST00000604324 THOC2Q8NI27 1593 aaKnown RBP17.88■□□□□ 0.45
CRX-206ENST00000604324 CUX2O14529 1486 aa17.83■□□□□ 0.44
CRX-206ENST00000604324 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
CRX-206ENST00000604324 FANCD2Q9BXW9 1451 aa17.8■□□□□ 0.44
CRX-206ENST00000604324 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
CRX-206ENST00000604324 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
CRX-206ENST00000604324 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
CRX-206ENST00000604324 WDR62O43379 1518 aa17.74■□□□□ 0.43
CRX-206ENST00000604324 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
CRX-206ENST00000604324 TOPBP1Q92547 1522 aa17.55■□□□□ 0.4
CRX-206ENST00000604324 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
CRX-206ENST00000604324 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
CRX-206ENST00000604324 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
CRX-206ENST00000604324 CUX1P39880 1505 aa17.44■□□□□ 0.38
CRX-206ENST00000604324 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
CRX-206ENST00000604324 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
CRX-206ENST00000604324 TARBP1Q13395 1621 aaKnown RBP17.38■□□□□ 0.37
CRX-206ENST00000604324 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
CRX-206ENST00000604324 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
CRX-206ENST00000604324 BIVM-ERCC5R4GMW8 1640 aa17.3■□□□□ 0.36
CRX-206ENST00000604324 RAD54L2Q9Y4B4 1467 aa17.3■□□□□ 0.36
CRX-206ENST00000604324 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
CRX-206ENST00000604324 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
CRX-206ENST00000604324 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
CRX-206ENST00000604324 SOGA1O94964 1423 aa17.27■□□□□ 0.36
CRX-206ENST00000604324 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.36
CRX-206ENST00000604324 WDR97A6NE52 1622 aa17.27■□□□□ 0.35
CRX-206ENST00000604324 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
CRX-206ENST00000604324 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
CRX-206ENST00000604324 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
CRX-206ENST00000604324 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
CRX-206ENST00000604324 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
CRX-206ENST00000604324 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
CRX-206ENST00000604324 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
CRX-206ENST00000604324 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
CRX-206ENST00000604324 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
CRX-206ENST00000604324 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
CRX-206ENST00000604324 CHD1O14646 1710 aa17.03■□□□□ 0.32
CRX-206ENST00000604324 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
CRX-206ENST00000604324 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
CRX-206ENST00000604324 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
CRX-206ENST00000604324 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
CRX-206ENST00000604324 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
CRX-206ENST00000604324 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
CRX-206ENST00000604324 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
CRX-206ENST00000604324 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
CRX-206ENST00000604324 GRIN2AQ12879 1464 aa16.89■□□□□ 0.3
CRX-206ENST00000604324 IGF1RP08069 1367 aa16.88■□□□□ 0.29
CRX-206ENST00000604324 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
CRX-206ENST00000604324 NUP160Q12769 1436 aa16.86■□□□□ 0.29
CRX-206ENST00000604324 FBLN2P98095 1184 aa16.86■□□□□ 0.29
CRX-206ENST00000604324 CEP170Q5SW79 1584 aa16.82■□□□□ 0.28
CRX-206ENST00000604324 CUL7Q14999 1698 aa16.82■□□□□ 0.28
CRX-206ENST00000604324 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
CRX-206ENST00000604324 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
CRX-206ENST00000604324 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
CRX-206ENST00000604324 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
CRX-206ENST00000604324 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
CRX-206ENST00000604324 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CRX-206ENST00000604324 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms