RNA–Protein interactions for RNA: ENST00000602875.5

SRA1-206, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 2

Gene SRA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-206ENST00000602875 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
SRA1-206ENST00000602875 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
SRA1-206ENST00000602875 ABCC9O60706 1549 aa25.29■■□□□ 1.64
SRA1-206ENST00000602875 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
SRA1-206ENST00000602875 NACADO15069 1562 aa24.31■■□□□ 1.48
SRA1-206ENST00000602875 RB1CC1Q8TDY2 1594 aa24.31■■□□□ 1.48
SRA1-206ENST00000602875 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
SRA1-206ENST00000602875 DCAF8L2P0C7V8 631 aa24.2■■□□□ 1.46
SRA1-206ENST00000602875 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
SRA1-206ENST00000602875 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
SRA1-206ENST00000602875 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
SRA1-206ENST00000602875 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
SRA1-206ENST00000602875 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.37
SRA1-206ENST00000602875 SHROOM4Q9ULL8 1493 aa23.32■■□□□ 1.32
SRA1-206ENST00000602875 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
SRA1-206ENST00000602875 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SRA1-206ENST00000602875 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
SRA1-206ENST00000602875 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
SRA1-206ENST00000602875 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
SRA1-206ENST00000602875 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
SRA1-206ENST00000602875 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
SRA1-206ENST00000602875 ATAD2BQ9ULI0 1458 aa22.5■■□□□ 1.19
SRA1-206ENST00000602875 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
SRA1-206ENST00000602875 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
SRA1-206ENST00000602875 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
SRA1-206ENST00000602875 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
SRA1-206ENST00000602875 WIZO95785 1651 aa22.3■■□□□ 1.16
SRA1-206ENST00000602875 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
SRA1-206ENST00000602875 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
SRA1-206ENST00000602875 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
SRA1-206ENST00000602875 NESP48681 1621 aa21.96■■□□□ 1.11
SRA1-206ENST00000602875 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
SRA1-206ENST00000602875 CCDC88BA6NC98 1476 aa21.77■■□□□ 1.08
SRA1-206ENST00000602875 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
SRA1-206ENST00000602875 CFTRP13569 1480 aa21.71■■□□□ 1.07
SRA1-206ENST00000602875 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
SRA1-206ENST00000602875 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
SRA1-206ENST00000602875 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
SRA1-206ENST00000602875 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
SRA1-206ENST00000602875 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
SRA1-206ENST00000602875 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
SRA1-206ENST00000602875 FANCD2Q9BXW9 1451 aa21.53■■□□□ 1.04
SRA1-206ENST00000602875 CUX2O14529 1486 aa21.49■■□□□ 1.03
SRA1-206ENST00000602875 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
SRA1-206ENST00000602875 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.03
SRA1-206ENST00000602875 WDR62O43379 1518 aa21.43■■□□□ 1.02
SRA1-206ENST00000602875 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
SRA1-206ENST00000602875 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
SRA1-206ENST00000602875 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
SRA1-206ENST00000602875 CUX1P39880 1505 aa21.14■□□□□ 0.97
SRA1-206ENST00000602875 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
SRA1-206ENST00000602875 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
SRA1-206ENST00000602875 TARBP1Q13395 1621 aaKnown RBP21.04■□□□□ 0.96
SRA1-206ENST00000602875 IFT140Q96RY7 1462 aa21.02■□□□□ 0.96
SRA1-206ENST00000602875 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
SRA1-206ENST00000602875 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
SRA1-206ENST00000602875 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SRA1-206ENST00000602875 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
SRA1-206ENST00000602875 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
SRA1-206ENST00000602875 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
SRA1-206ENST00000602875 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
SRA1-206ENST00000602875 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
SRA1-206ENST00000602875 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
SRA1-206ENST00000602875 SOGA1O94964 1423 aa20.91■□□□□ 0.94
SRA1-206ENST00000602875 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
SRA1-206ENST00000602875 AQRO60306 1485 aaKnown RBP eCLIP20.87■□□□□ 0.932e-6■■■□□ 16.6
SRA1-206ENST00000602875 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
SRA1-206ENST00000602875 ABCA10Q8WWZ4 1543 aa20.8■□□□□ 0.92
SRA1-206ENST00000602875 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
SRA1-206ENST00000602875 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
SRA1-206ENST00000602875 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
SRA1-206ENST00000602875 GRIN2BQ13224 1484 aa20.67■□□□□ 0.9
SRA1-206ENST00000602875 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
SRA1-206ENST00000602875 CHD1O14646 1710 aa20.65■□□□□ 0.9
SRA1-206ENST00000602875 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
SRA1-206ENST00000602875 OSCARQ8IYS5 282 aa20.55■□□□□ 0.88
SRA1-206ENST00000602875 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
SRA1-206ENST00000602875 ADAMTS12P58397 1594 aa20.54■□□□□ 0.88
SRA1-206ENST00000602875 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
SRA1-206ENST00000602875 FBLN2P98095 1184 aa20.48■□□□□ 0.87
SRA1-206ENST00000602875 KIF27Q86VH2 1401 aa20.45■□□□□ 0.86
SRA1-206ENST00000602875 CLASP1Q7Z460 1538 aa20.44■□□□□ 0.86
SRA1-206ENST00000602875 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
SRA1-206ENST00000602875 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
SRA1-206ENST00000602875 IGF1RP08069 1367 aa20.44■□□□□ 0.86
SRA1-206ENST00000602875 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
SRA1-206ENST00000602875 GRIN2AQ12879 1464 aa20.43■□□□□ 0.86
SRA1-206ENST00000602875 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
SRA1-206ENST00000602875 CEP170Q5SW79 1584 aa20.38■□□□□ 0.85
SRA1-206ENST00000602875 NUP160Q12769 1436 aa20.36■□□□□ 0.85
SRA1-206ENST00000602875 CUL7Q14999 1698 aa20.35■□□□□ 0.85
SRA1-206ENST00000602875 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
SRA1-206ENST00000602875 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
SRA1-206ENST00000602875 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
SRA1-206ENST00000602875 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SRA1-206ENST00000602875 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
SRA1-206ENST00000602875 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.84
SRA1-206ENST00000602875 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
SRA1-206ENST00000602875 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
SRA1-206ENST00000602875 ARAP1Q96P48 1450 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms