RNA–Protein interactions for RNA: ENST00000602868.1

SFXN2-213, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-213ENST00000602868 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
SFXN2-213ENST00000602868 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
SFXN2-213ENST00000602868 ABCC9O60706 1549 aa28.14■■■□□ 2.1
SFXN2-213ENST00000602868 RB1CC1Q8TDY2 1594 aa26.9■■□□□ 1.9
SFXN2-213ENST00000602868 NACADO15069 1562 aa26.71■■□□□ 1.87
SFXN2-213ENST00000602868 DNAJC5BQ9UF47 199 aa26.45■■□□□ 1.82
SFXN2-213ENST00000602868 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
SFXN2-213ENST00000602868 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.82
SFXN2-213ENST00000602868 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
SFXN2-213ENST00000602868 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
SFXN2-213ENST00000602868 DCAF1Q9Y4B6 1507 aa25.96■■□□□ 1.75
SFXN2-213ENST00000602868 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.75
SFXN2-213ENST00000602868 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
SFXN2-213ENST00000602868 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
SFXN2-213ENST00000602868 SCRIBQ14160 1630 aa25.48■■□□□ 1.67
SFXN2-213ENST00000602868 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
SFXN2-213ENST00000602868 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.66
SFXN2-213ENST00000602868 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
SFXN2-213ENST00000602868 NCAPD3P42695 1498 aa24.66■■□□□ 1.54
SFXN2-213ENST00000602868 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
SFXN2-213ENST00000602868 CUX2O14529 1486 aa24.5■■□□□ 1.51
SFXN2-213ENST00000602868 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
SFXN2-213ENST00000602868 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
SFXN2-213ENST00000602868 HMGXB3Q12766 1538 aa24.44■■□□□ 1.5
SFXN2-213ENST00000602868 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
SFXN2-213ENST00000602868 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
SFXN2-213ENST00000602868 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
SFXN2-213ENST00000602868 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
SFXN2-213ENST00000602868 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
SFXN2-213ENST00000602868 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
SFXN2-213ENST00000602868 NESP48681 1621 aa24.09■■□□□ 1.45
SFXN2-213ENST00000602868 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
SFXN2-213ENST00000602868 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
SFXN2-213ENST00000602868 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
SFXN2-213ENST00000602868 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
SFXN2-213ENST00000602868 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
SFXN2-213ENST00000602868 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
SFXN2-213ENST00000602868 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
SFXN2-213ENST00000602868 WIZO95785 1651 aa23.67■■□□□ 1.38
SFXN2-213ENST00000602868 WDR62O43379 1518 aa23.66■■□□□ 1.38
SFXN2-213ENST00000602868 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
SFXN2-213ENST00000602868 CFTRP13569 1480 aa23.57■■□□□ 1.36
SFXN2-213ENST00000602868 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
SFXN2-213ENST00000602868 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SFXN2-213ENST00000602868 OSCARQ8IYS5 282 aa23.38■■□□□ 1.33
SFXN2-213ENST00000602868 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
SFXN2-213ENST00000602868 URB2Q14146 1524 aaKnown RBP23.29■■□□□ 1.32
SFXN2-213ENST00000602868 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
SFXN2-213ENST00000602868 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
SFXN2-213ENST00000602868 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
SFXN2-213ENST00000602868 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
SFXN2-213ENST00000602868 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
SFXN2-213ENST00000602868 TOPBP1Q92547 1522 aa23.08■■□□□ 1.28
SFXN2-213ENST00000602868 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
SFXN2-213ENST00000602868 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SFXN2-213ENST00000602868 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
SFXN2-213ENST00000602868 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
SFXN2-213ENST00000602868 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
SFXN2-213ENST00000602868 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
SFXN2-213ENST00000602868 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
SFXN2-213ENST00000602868 TARBP1Q13395 1621 aaKnown RBP22.84■■□□□ 1.25
SFXN2-213ENST00000602868 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.244e-7■■■■■ 31.4
SFXN2-213ENST00000602868 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
SFXN2-213ENST00000602868 WDR97A6NE52 1622 aa22.81■■□□□ 1.24
SFXN2-213ENST00000602868 SOGA1O94964 1423 aa22.78■■□□□ 1.24
SFXN2-213ENST00000602868 FBLN2P98095 1184 aa22.74■■□□□ 1.23
SFXN2-213ENST00000602868 CYB5RLQ6IPT4 315 aa22.73■■□□□ 1.23
SFXN2-213ENST00000602868 CHD1O14646 1710 aa22.7■■□□□ 1.22
SFXN2-213ENST00000602868 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
SFXN2-213ENST00000602868 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
SFXN2-213ENST00000602868 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
SFXN2-213ENST00000602868 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
SFXN2-213ENST00000602868 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
SFXN2-213ENST00000602868 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
SFXN2-213ENST00000602868 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
SFXN2-213ENST00000602868 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
SFXN2-213ENST00000602868 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
SFXN2-213ENST00000602868 CUX1P39880 1505 aa22.57■■□□□ 1.2
SFXN2-213ENST00000602868 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
SFXN2-213ENST00000602868 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
SFXN2-213ENST00000602868 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
SFXN2-213ENST00000602868 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
SFXN2-213ENST00000602868 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
SFXN2-213ENST00000602868 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
SFXN2-213ENST00000602868 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
SFXN2-213ENST00000602868 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
SFXN2-213ENST00000602868 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
SFXN2-213ENST00000602868 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
SFXN2-213ENST00000602868 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
SFXN2-213ENST00000602868 NUP160Q12769 1436 aa22.23■■□□□ 1.15
SFXN2-213ENST00000602868 BIVM-ERCC5R4GMW8 1640 aa22.23■■□□□ 1.15
SFXN2-213ENST00000602868 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
SFXN2-213ENST00000602868 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
SFXN2-213ENST00000602868 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
SFXN2-213ENST00000602868 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
SFXN2-213ENST00000602868 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
SFXN2-213ENST00000602868 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
SFXN2-213ENST00000602868 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
SFXN2-213ENST00000602868 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
SFXN2-213ENST00000602868 NPM1P06748 294 aaKnown RBP eCLIP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms