RNA–Protein interactions for RNA: ENST00000602250.5

FKRP-227, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-227ENST00000602250 NISCHQ9Y2I1 1504 aa47.55■■■■■ 5.2
FKRP-227ENST00000602250 CCDC180Q9P1Z9 1646 aa42.28■■■■■ 4.36
FKRP-227ENST00000602250 ABCC9O60706 1549 aa41.42■■■■■ 4.22
FKRP-227ENST00000602250 DCAF8L2P0C7V8 631 aa39.87■■■■□ 3.97
FKRP-227ENST00000602250 RB1CC1Q8TDY2 1594 aa39.83■■■■□ 3.97
FKRP-227ENST00000602250 NACADO15069 1562 aa39.76■■■■□ 3.96
FKRP-227ENST00000602250 ZCCHC6Q5VYS8 1495 aaKnown RBP39.58■■■■□ 3.93
FKRP-227ENST00000602250 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
FKRP-227ENST00000602250 DCAF1Q9Y4B6 1507 aa39.31■■■■□ 3.88
FKRP-227ENST00000602250 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
FKRP-227ENST00000602250 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
FKRP-227ENST00000602250 SCRIBQ14160 1630 aa38.61■■■■□ 3.77
FKRP-227ENST00000602250 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
FKRP-227ENST00000602250 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
FKRP-227ENST00000602250 DNAJC5BQ9UF47 199 aa38.01■■■■□ 3.68
FKRP-227ENST00000602250 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
FKRP-227ENST00000602250 CC2D2AQ9P2K1 1620 aa37.46■■■■□ 3.59
FKRP-227ENST00000602250 CECR2Q9BXF3 1484 aa37.2■■■■□ 3.55
FKRP-227ENST00000602250 SMARCA4P51532 1647 aa36.91■■■■□ 3.5
FKRP-227ENST00000602250 BAZ1AQ9NRL2 1556 aaPredicted RBP36.87■■■■□ 3.49
FKRP-227ENST00000602250 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
FKRP-227ENST00000602250 NCAPD3P42695 1498 aa36.68■■■■□ 3.46
FKRP-227ENST00000602250 SMARCA2P51531 1590 aa36.67■■■■□ 3.46
FKRP-227ENST00000602250 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
FKRP-227ENST00000602250 PEG3Q9GZU2 1588 aa36.51■■■■□ 3.44
FKRP-227ENST00000602250 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
FKRP-227ENST00000602250 BAZ1BQ9UIG0 1483 aaKnown RBP36.43■■■■□ 3.42
FKRP-227ENST00000602250 WIZO95785 1651 aa36.29■■■■□ 3.4
FKRP-227ENST00000602250 RSF1Q96T23 1441 aaPredicted RBP36.23■■■■□ 3.39
FKRP-227ENST00000602250 TOP2AP11388 1531 aaKnown RBP35.87■■■■□ 3.33
FKRP-227ENST00000602250 NESP48681 1621 aa35.83■■■■□ 3.33
FKRP-227ENST00000602250 LAMC3Q9Y6N6 1575 aa35.73■■■■□ 3.31
FKRP-227ENST00000602250 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
FKRP-227ENST00000602250 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
FKRP-227ENST00000602250 PDS5BQ9NTI5 1447 aa35.51■■■■□ 3.28
FKRP-227ENST00000602250 CCDC88BA6NC98 1476 aa35.46■■■■□ 3.27
FKRP-227ENST00000602250 KIF21AQ7Z4S6 1674 aa35.42■■■■□ 3.26
FKRP-227ENST00000602250 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
FKRP-227ENST00000602250 CFTRP13569 1480 aa35.39■■■■□ 3.26
FKRP-227ENST00000602250 CUX2O14529 1486 aa35.3■■■■□ 3.24
FKRP-227ENST00000602250 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
FKRP-227ENST00000602250 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
FKRP-227ENST00000602250 CEP164Q9UPV0 1460 aa35.19■■■■□ 3.22
FKRP-227ENST00000602250 PRDM2Q13029 1718 aa35.18■■■■□ 3.22
FKRP-227ENST00000602250 MRC2Q9UBG0 1479 aa35.13■■■■□ 3.21
FKRP-227ENST00000602250 WDR62O43379 1518 aa34.99■■■■□ 3.19
FKRP-227ENST00000602250 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
FKRP-227ENST00000602250 ABCC8Q09428 1581 aa34.67■■■■□ 3.14
FKRP-227ENST00000602250 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
FKRP-227ENST00000602250 DNMBPQ6XZF7 1577 aa34.61■■■■□ 3.13
FKRP-227ENST00000602250 IFT140Q96RY7 1462 aa34.44■■■■□ 3.1
FKRP-227ENST00000602250 CUX1P39880 1505 aa34.38■■■■□ 3.09
FKRP-227ENST00000602250 POLA1P09884 1462 aaPredicted RBP34.35■■■■□ 3.09
FKRP-227ENST00000602250 ZNF608Q9ULD9 1512 aaPredicted RBP34.28■■■■□ 3.08
FKRP-227ENST00000602250 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
FKRP-227ENST00000602250 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.08
FKRP-227ENST00000602250 DNAJC5Q9H3Z4 198 aa34.26■■■■□ 3.08
FKRP-227ENST00000602250 SOGA1O94964 1423 aa34.25■■■■□ 3.07
FKRP-227ENST00000602250 RAD54L2Q9Y4B4 1467 aa34.22■■■■□ 3.07
FKRP-227ENST00000602250 WRNQ14191 1432 aaPredicted RBP eCLIP34.18■■■■□ 3.06
FKRP-227ENST00000602250 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
FKRP-227ENST00000602250 AQRO60306 1485 aaKnown RBP eCLIP34.11■■■■□ 3.05
FKRP-227ENST00000602250 TOP2BQ02880 1626 aa34.09■■■■□ 3.05
FKRP-227ENST00000602250 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
FKRP-227ENST00000602250 SYNJ1O43426 1573 aa34.07■■■■□ 3.05
FKRP-227ENST00000602250 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
FKRP-227ENST00000602250 WDR97A6NE52 1622 aa33.99■■■■□ 3.03
FKRP-227ENST00000602250 ABCA10Q8WWZ4 1543 aa33.93■■■■□ 3.02
FKRP-227ENST00000602250 OSCARQ8IYS5 282 aa33.9■■■■□ 3.02
FKRP-227ENST00000602250 GAPVD1Q14C86 1478 aa33.84■■■■□ 3.01
FKRP-227ENST00000602250 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
FKRP-227ENST00000602250 ABCA5Q8WWZ7 1642 aa33.79■■■■□ 3
FKRP-227ENST00000602250 PBRM1Q86U86 1689 aa33.78■■■■□ 3
FKRP-227ENST00000602250 SNAPC4Q5SXM2 1469 aa33.78■■■■□ 3
FKRP-227ENST00000602250 FBLN2P98095 1184 aa33.78■■■■□ 3
FKRP-227ENST00000602250 CHD1O14646 1710 aa33.76■■■□□ 2.99
FKRP-227ENST00000602250 MAGI1Q96QZ7 1491 aaPredicted RBP33.73■■■□□ 2.99
FKRP-227ENST00000602250 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
FKRP-227ENST00000602250 SYNJ2O15056 1496 aa33.61■■■□□ 2.97
FKRP-227ENST00000602250 ERICH3Q5RHP9 1530 aa33.53■■■□□ 2.96
FKRP-227ENST00000602250 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
FKRP-227ENST00000602250 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
FKRP-227ENST00000602250 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.94
FKRP-227ENST00000602250 TRIM41Q8WV44 630 aa33.43■■■□□ 2.94
FKRP-227ENST00000602250 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
FKRP-227ENST00000602250 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
FKRP-227ENST00000602250 IGF1RP08069 1367 aa33.33■■■□□ 2.93
FKRP-227ENST00000602250 RIMBP3CA6NJZ7 1639 aa33.32■■■□□ 2.92
FKRP-227ENST00000602250 RIMBP3BA6NNM3 1639 aa33.32■■■□□ 2.92
FKRP-227ENST00000602250 RIMBP3Q9UFD9 1639 aa33.32■■■□□ 2.92
FKRP-227ENST00000602250 ARHGEF11O15085 1522 aa33.29■■■□□ 2.92
FKRP-227ENST00000602250 CUL7Q14999 1698 aa33.25■■■□□ 2.91
FKRP-227ENST00000602250 CEP170Q5SW79 1584 aa33.21■■■□□ 2.91
FKRP-227ENST00000602250 NUP160Q12769 1436 aa33.21■■■□□ 2.91
FKRP-227ENST00000602250 CARMIL1Q5VZK9 1371 aa33.15■■■□□ 2.9
FKRP-227ENST00000602250 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
FKRP-227ENST00000602250 CYB5RLQ6IPT4 315 aa33.06■■■□□ 2.88
FKRP-227ENST00000602250 ARAP1Q96P48 1450 aa33.02■■■□□ 2.88
FKRP-227ENST00000602250 CHIC1Q5VXU3 224 aa32.98■■■□□ 2.87
FKRP-227ENST00000602250 SHROOM2Q13796 1616 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms