RNA–Protein interactions for RNA: ENST00000601502.1

MYO1F-220, Transcript of myosin IF, humanhuman

TSL 2

Gene MYO1F, Length 466 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO1F-220ENST00000601502 NISCHQ9Y2I1 1504 aa34.79■■■■□ 3.16
MYO1F-220ENST00000601502 CCDC180Q9P1Z9 1646 aa30.97■■■□□ 2.55
MYO1F-220ENST00000601502 ABCC9O60706 1549 aa30.28■■■□□ 2.44
MYO1F-220ENST00000601502 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
MYO1F-220ENST00000601502 NACADO15069 1562 aa29.04■■■□□ 2.24
MYO1F-220ENST00000601502 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
MYO1F-220ENST00000601502 DCAF8L2P0C7V8 631 aa28.93■■■□□ 2.22
MYO1F-220ENST00000601502 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
MYO1F-220ENST00000601502 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
MYO1F-220ENST00000601502 UNC13AQ9UPW8 1703 aa28.66■■■□□ 2.18
MYO1F-220ENST00000601502 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
MYO1F-220ENST00000601502 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
MYO1F-220ENST00000601502 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
MYO1F-220ENST00000601502 SHROOM4Q9ULL8 1493 aa27.85■■■□□ 2.05
MYO1F-220ENST00000601502 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
MYO1F-220ENST00000601502 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
MYO1F-220ENST00000601502 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
MYO1F-220ENST00000601502 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
MYO1F-220ENST00000601502 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
MYO1F-220ENST00000601502 BAZ1AQ9NRL2 1556 aaPredicted RBP26.93■■□□□ 1.9
MYO1F-220ENST00000601502 MROH2BQ7Z745 1585 aa26.86■■□□□ 1.89
MYO1F-220ENST00000601502 ATAD2BQ9ULI0 1458 aa26.84■■□□□ 1.89
MYO1F-220ENST00000601502 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
MYO1F-220ENST00000601502 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
MYO1F-220ENST00000601502 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
MYO1F-220ENST00000601502 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
MYO1F-220ENST00000601502 WIZO95785 1651 aa26.62■■□□□ 1.85
MYO1F-220ENST00000601502 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
MYO1F-220ENST00000601502 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
MYO1F-220ENST00000601502 NESP48681 1621 aa26.26■■□□□ 1.79
MYO1F-220ENST00000601502 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
MYO1F-220ENST00000601502 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
MYO1F-220ENST00000601502 ERCC6Q03468 1493 aa26.02■■□□□ 1.76
MYO1F-220ENST00000601502 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
MYO1F-220ENST00000601502 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
MYO1F-220ENST00000601502 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
MYO1F-220ENST00000601502 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
MYO1F-220ENST00000601502 CFTRP13569 1480 aa25.87■■□□□ 1.73
MYO1F-220ENST00000601502 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
MYO1F-220ENST00000601502 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
MYO1F-220ENST00000601502 CUX2O14529 1486 aa25.76■■□□□ 1.71
MYO1F-220ENST00000601502 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
MYO1F-220ENST00000601502 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
MYO1F-220ENST00000601502 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
MYO1F-220ENST00000601502 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
MYO1F-220ENST00000601502 WDR62O43379 1518 aa25.63■■□□□ 1.69
MYO1F-220ENST00000601502 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
MYO1F-220ENST00000601502 TOPBP1Q92547 1522 aa25.35■■□□□ 1.65
MYO1F-220ENST00000601502 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
MYO1F-220ENST00000601502 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
MYO1F-220ENST00000601502 CUX1P39880 1505 aa25.2■■□□□ 1.62
MYO1F-220ENST00000601502 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
MYO1F-220ENST00000601502 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
MYO1F-220ENST00000601502 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
MYO1F-220ENST00000601502 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
MYO1F-220ENST00000601502 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
MYO1F-220ENST00000601502 RAD54L2Q9Y4B4 1467 aa25.05■■□□□ 1.6
MYO1F-220ENST00000601502 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
MYO1F-220ENST00000601502 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
MYO1F-220ENST00000601502 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
MYO1F-220ENST00000601502 WDR97A6NE52 1622 aa24.99■■□□□ 1.59
MYO1F-220ENST00000601502 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
MYO1F-220ENST00000601502 SOGA1O94964 1423 aa24.95■■□□□ 1.58
MYO1F-220ENST00000601502 WRNQ14191 1432 aaPredicted RBP eCLIP24.94■■□□□ 1.58
MYO1F-220ENST00000601502 AQRO60306 1485 aaKnown RBP eCLIP24.93■■□□□ 1.58
MYO1F-220ENST00000601502 DNAJC5Q9H3Z4 198 aa24.92■■□□□ 1.58
MYO1F-220ENST00000601502 TDRD9Q8NDG6 1382 aaKnown RBP24.84■■□□□ 1.57
MYO1F-220ENST00000601502 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
MYO1F-220ENST00000601502 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
MYO1F-220ENST00000601502 PBRM1Q86U86 1689 aa24.79■■□□□ 1.56
MYO1F-220ENST00000601502 CHD1O14646 1710 aa24.78■■□□□ 1.56
MYO1F-220ENST00000601502 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
MYO1F-220ENST00000601502 GAPVD1Q14C86 1478 aa24.7■■□□□ 1.54
MYO1F-220ENST00000601502 GRIN2BQ13224 1484 aa24.67■■□□□ 1.54
MYO1F-220ENST00000601502 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
MYO1F-220ENST00000601502 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
MYO1F-220ENST00000601502 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
MYO1F-220ENST00000601502 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
MYO1F-220ENST00000601502 FBLN2P98095 1184 aa24.51■■□□□ 1.51
MYO1F-220ENST00000601502 ERICH3Q5RHP9 1530 aa24.5■■□□□ 1.51
MYO1F-220ENST00000601502 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
MYO1F-220ENST00000601502 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
MYO1F-220ENST00000601502 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
MYO1F-220ENST00000601502 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
MYO1F-220ENST00000601502 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
MYO1F-220ENST00000601502 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
MYO1F-220ENST00000601502 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
MYO1F-220ENST00000601502 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
MYO1F-220ENST00000601502 ARHGEF11O15085 1522 aa24.36■■□□□ 1.49
MYO1F-220ENST00000601502 CEP170Q5SW79 1584 aa24.36■■□□□ 1.49
MYO1F-220ENST00000601502 IGF1RP08069 1367 aa24.31■■□□□ 1.48
MYO1F-220ENST00000601502 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
MYO1F-220ENST00000601502 CUL7Q14999 1698 aa24.31■■□□□ 1.48
MYO1F-220ENST00000601502 NUP160Q12769 1436 aa24.29■■□□□ 1.48
MYO1F-220ENST00000601502 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
MYO1F-220ENST00000601502 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
MYO1F-220ENST00000601502 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
MYO1F-220ENST00000601502 ERCC6L2Q5T890 1561 aa24.17■■□□□ 1.46
MYO1F-220ENST00000601502 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
MYO1F-220ENST00000601502 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms