RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-222ENST00000601392 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
CELF4-222ENST00000601392 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
CELF4-222ENST00000601392 ABCC9O60706 1549 aa26.48■■□□□ 1.83
CELF4-222ENST00000601392 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
CELF4-222ENST00000601392 NACADO15069 1562 aa25.27■■□□□ 1.64
CELF4-222ENST00000601392 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
CELF4-222ENST00000601392 MYO15BQ96JP2 1530 aa25■■□□□ 1.59
CELF4-222ENST00000601392 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
CELF4-222ENST00000601392 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
CELF4-222ENST00000601392 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
CELF4-222ENST00000601392 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
CELF4-222ENST00000601392 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
CELF4-222ENST00000601392 SCRIBQ14160 1630 aa24.51■■□□□ 1.51
CELF4-222ENST00000601392 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
CELF4-222ENST00000601392 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
CELF4-222ENST00000601392 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
CELF4-222ENST00000601392 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
CELF4-222ENST00000601392 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
CELF4-222ENST00000601392 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
CELF4-222ENST00000601392 BAZ1AQ9NRL2 1556 aaPredicted RBP23.33■■□□□ 1.33
CELF4-222ENST00000601392 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
CELF4-222ENST00000601392 NCAPD3P42695 1498 aa23.28■■□□□ 1.32
CELF4-222ENST00000601392 ATAD2BQ9ULI0 1458 aa23.27■■□□□ 1.32
CELF4-222ENST00000601392 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
CELF4-222ENST00000601392 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
CELF4-222ENST00000601392 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
CELF4-222ENST00000601392 PEG3Q9GZU2 1588 aa23.12■■□□□ 1.29
CELF4-222ENST00000601392 WIZO95785 1651 aa22.91■■□□□ 1.26
CELF4-222ENST00000601392 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
CELF4-222ENST00000601392 NESP48681 1621 aa22.82■■□□□ 1.24
CELF4-222ENST00000601392 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
CELF4-222ENST00000601392 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
CELF4-222ENST00000601392 CUX2O14529 1486 aa22.68■■□□□ 1.22
CELF4-222ENST00000601392 SUPT5HO00267 1087 aaKnown RBP22.68■■□□□ 1.22
CELF4-222ENST00000601392 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
CELF4-222ENST00000601392 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
CELF4-222ENST00000601392 PDS5BQ9NTI5 1447 aa22.6■■□□□ 1.21
CELF4-222ENST00000601392 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
CELF4-222ENST00000601392 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
CELF4-222ENST00000601392 CFTRP13569 1480 aa22.41■■□□□ 1.18
CELF4-222ENST00000601392 MRC2Q9UBG0 1479 aa22.41■■□□□ 1.18
CELF4-222ENST00000601392 CEP164Q9UPV0 1460 aa22.4■■□□□ 1.18
CELF4-222ENST00000601392 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
CELF4-222ENST00000601392 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
CELF4-222ENST00000601392 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
CELF4-222ENST00000601392 WDR62O43379 1518 aa22.32■■□□□ 1.16
CELF4-222ENST00000601392 DNAJC5Q9H3Z4 198 aa22.19■■□□□ 1.14
CELF4-222ENST00000601392 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
CELF4-222ENST00000601392 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
CELF4-222ENST00000601392 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
CELF4-222ENST00000601392 DNMBPQ6XZF7 1577 aa21.97■■□□□ 1.11
CELF4-222ENST00000601392 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
CELF4-222ENST00000601392 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
CELF4-222ENST00000601392 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
CELF4-222ENST00000601392 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
CELF4-222ENST00000601392 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.07
CELF4-222ENST00000601392 CUX1P39880 1505 aa21.73■■□□□ 1.07
CELF4-222ENST00000601392 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
CELF4-222ENST00000601392 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
CELF4-222ENST00000601392 SOGA1O94964 1423 aa21.68■■□□□ 1.06
CELF4-222ENST00000601392 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
CELF4-222ENST00000601392 AQRO60306 1485 aaKnown RBP eCLIP21.66■■□□□ 1.06
CELF4-222ENST00000601392 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
CELF4-222ENST00000601392 WDR97A6NE52 1622 aa21.61■■□□□ 1.05
CELF4-222ENST00000601392 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
CELF4-222ENST00000601392 CHD1O14646 1710 aa21.57■■□□□ 1.04
CELF4-222ENST00000601392 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.04
CELF4-222ENST00000601392 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
CELF4-222ENST00000601392 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
CELF4-222ENST00000601392 FBLN2P98095 1184 aa21.5■■□□□ 1.03
CELF4-222ENST00000601392 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
CELF4-222ENST00000601392 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
CELF4-222ENST00000601392 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
CELF4-222ENST00000601392 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
CELF4-222ENST00000601392 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
CELF4-222ENST00000601392 TRIM41Q8WV44 630 aa21.46■■□□□ 1.03
CELF4-222ENST00000601392 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.02
CELF4-222ENST00000601392 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
CELF4-222ENST00000601392 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
CELF4-222ENST00000601392 RIMBP3CA6NJZ7 1639 aa21.4■■□□□ 1.02
CELF4-222ENST00000601392 RIMBP3BA6NNM3 1639 aa21.4■■□□□ 1.02
CELF4-222ENST00000601392 RIMBP3Q9UFD9 1639 aa21.4■■□□□ 1.02
CELF4-222ENST00000601392 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
CELF4-222ENST00000601392 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
CELF4-222ENST00000601392 ARHGEF11O15085 1522 aa21.35■■□□□ 1.01
CELF4-222ENST00000601392 ADAMTS12P58397 1594 aa21.27■□□□□ 0.99
CELF4-222ENST00000601392 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
CELF4-222ENST00000601392 ERICH3Q5RHP9 1530 aa21.22■□□□□ 0.99
CELF4-222ENST00000601392 GRIN2AQ12879 1464 aa21.2■□□□□ 0.98
CELF4-222ENST00000601392 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
CELF4-222ENST00000601392 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
CELF4-222ENST00000601392 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.97
CELF4-222ENST00000601392 EEA1Q15075 1411 aa21.11■□□□□ 0.97
CELF4-222ENST00000601392 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
CELF4-222ENST00000601392 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
CELF4-222ENST00000601392 NUP160Q12769 1436 aa21.08■□□□□ 0.97
CELF4-222ENST00000601392 CUL7Q14999 1698 aa21.03■□□□□ 0.96
CELF4-222ENST00000601392 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
CELF4-222ENST00000601392 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
CELF4-222ENST00000601392 IGF1RP08069 1367 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms